Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci12g1185 | ATGGATATGTATGTTTCGAACTCCCTTTCCATCGACGACCTTCTCTACCTCTCCGACGTAGACCTCACGTCCTCCTCCTCCTTCTCCGCCGCCGCTAGTTTTCTCCGCCACCAGCCACTGCTCTCTTCACCACAAAACCCATTTCACCACCACCACCACCACCAACCCTCGTCCTTCTCCCCCTCCTCCTCCACCTACTTCAACGATTTCCCTCCCCTCCCTTCCGTCGACCCCGCCGTCGATCTATGTATCCCCAACAATGACGTAGCGGAGCTGGAATGGCTCTCGCAATTCTCGGACAATTACTTTCATGACTTACCGGTTACGACGGATGAGACGGTGGTGGGTTCCTGTGTTCTGCATTCCGACACGTCGTTTAGCGGAAAAGCTAATCAAAGCAAGCGTTCGAGAGCAGCCCGTGGGAAATCAAGACTCAAAGCAGCCGAGGCAAACGGCGGGTCGTCGTCGTCGGGAGAGGGATCAGGTGTGCGCAGGTGCACCCACTGTGCATCAGAGAAAACCCCGCAATGGCGAAGCGGACCACTAGGACCCAAGACGCTGTGCAACGCGTGCGGAGTGAGGTATAAGTCGGGTCGGTTGGTACCCGAATACCGACCCGCAGCTAGCCCGACGTTCGTGCTGAGTCAGCACTCGAACTCTCACCGAAAGGTGCTGGAGCTCCGGAGGCAGAAGGAGATGGTGATGATGAAACAGCAAGTCCAGCCAGAATAA | 732 | 0.5642 | MDMYVSNSLSIDDLLYLSDVDLTSSSSFSAAASFLRHQPLLSSPQNPFHHHHHHQPSSFSPSSSTYFNDFPPLPSVDPAVDLCIPNNDVAELEWLSQFSDNYFHDLPVTTDETVVGSCVLHSDTSFSGKANQSKRSRAARGKSRLKAAEANGGSSSSGEGSGVRRCTHCASEKTPQWRSGPLGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLSQHSNSHRKVLELRRQKEMVMMKQQVQPE | 243 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci12g1185 | 243 | ProSiteProfiles | GATA-type zinc finger domain profile. | 164 | 196 | IPR000679 | GO:0006355|GO:0043565 | |
Prci12g1185 | 243 | PANTHER | GATA TRANSCRIPTION FACTOR | 132 | 235 | - | - | |
Prci12g1185 | 243 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 164 | 223 | - | - | |
Prci12g1185 | 243 | Pfam | GATA zinc finger | 166 | 199 | IPR000679 | GO:0006355|GO:0043565 | |
Prci12g1185 | 243 | Gene3D | - | 157 | 239 | IPR013088 | GO:0006355|GO:0008270 | |
Prci12g1185 | 243 | FunFam | GATA transcription factor | 156 | 241 | - | - | |
Prci12g1185 | 243 | SMART | GATA_3 | 160 | 210 | IPR000679 | GO:0006355|GO:0043565 | |
Prci12g1185 | 243 | ProSitePatterns | GATA-type zinc finger domain. | 166 | 191 | IPR000679 | GO:0006355|GO:0043565 | |
Prci12g1185 | 243 | MobiDBLite | consensus disorder prediction | 126 | 165 | - | - | |
Prci12g1185 | 243 | CDD | ZnF_GATA | 165 | 212 | IPR000679 | GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci12g1185 | Prci-Chr12 | 19050353 | 19051541 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci12g1185 | 44 | 241 | C2C2-Gata Transcription Factor Family | AT2G45050 | 49.782 | 4.49e-64 | 199 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-GATA | Prci12g1185 | GATA | 4.1e-16 | CL0167 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci12g1185 | - | - | pcin:129288162 | 387.882 |