Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1183 ATGCTTACCACGACTGCGTTTTCCTCCGTCTTCGCCTTCCGTTTAGCCACCGTAAGAGCATCCGAATCCAGGTCAACTTATTCTTTTCCTCTCAAGCTCAGAGCATCTCTCCATGACTACCCGCTCGCAAGCAAAATTGTGGTTAAAAATTTATCATATTCCTCTGGTGAGACTATTCTTGAGAAGGAATTTTCCAACTTTGGCGAGATAGCTGATGTTAAAGTTGTTAAAGATACCACAAAAAGATCTAAGGGATATGCTTTTATTCAGTACACCTCTCAAGATGATGCAATGCTTGCAATAGAAAACATGGATCAAAAGGTATTAGATGGGCGGAAGATTTATGTTGAAATAGCAAAACCTGGGAAGGATGCTTTTCATGGCCACCCAAAGACCTCAGGCCCCCCAAAGGAGTGGCAGAAACCAGATCAAGAGGAAGTGGTGGATTGCTGGTACTGA 459 0.4314 MLTTTAFSSVFAFRLATVRASESRSTYSFPLKLRASLHDYPLASKIVVKNLSYSSGETILEKEFSNFGEIADVKVVKDTTKRSKGYAFIQYTSQDDAMLAIENMDQKVLDGRKIYVEIAKPGKDAFHGHPKTSGPPKEWQKPDQEEVVDCWY 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1183 152 SUPERFAMILY RNA-binding domain, RBD 44 126 IPR035979 GO:0003676
Prci12g1183 152 Gene3D - 32 146 IPR012677 -
Prci12g1183 152 CDD RRM_SF 46 117 - -
Prci12g1183 152 MobiDBLite consensus disorder prediction 125 144 - -
Prci12g1183 152 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 38 133 - -
Prci12g1183 152 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 46 114 IPR000504 GO:0003723
Prci12g1183 152 SMART rrm1_1 45 117 IPR000504 GO:0003723
Prci12g1183 152 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 44 121 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1183 Prci-Chr12 19008030 19043614 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1183 19 124 Eukaryotic Initiation Factors Gene Family AT4G34110 32.075 7.40e-09 51.6