Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1132 ATGCGTGTTGCGTCGGTTGTCGTCTTCCTCGTCAGGACCAAAGCCCACGTGGGGAATCGCCAGTGGAGAATTCATCGCAAATTGGCAATCAAGCTGTTCGATACTTGTGCATCATACACACCGTTCCACTCATTATTCTTCAGAACTCTCTCACAAATCAACATGGAAAGTGATAATAATAACTTCTCTACCATACCGTCTTCTTCTTCTTCTTCATCGTCAACGTCAACATCATCACCAACAGTGTCTTGTTTGAAATTCAAGCATGATGATCAGTCTGAAGGTGATCATCTGAATGATAAGCACAAGATCGTGAGCAAGAAGAAGAGACAGAGAAGTGAAAGTGACGATAATGATGAAGGGAATAAGCATTCTACTTACAGGGGTGTGAGAATGAGAGCTTGGGGAAAATGGGTTTCTGAGATTCGTGAGCCCAGAAAGAAGTCAAGAATATGGCTCGGAACATATTCTACTGCAGAAATGGCGGCTCGAGCCCATGATGTAGCTGCTTTAGCCATCAAAGGTCAGTCGGCTTACCTTAATTTCCCCGAACTGGCTCCTCAACTTCCCCTCCCGGCCAGCACGGCTCCCAAGGACATCCAGGCCGCGGCTGCAAAGGCGGCAGCCACCTTCTGTCAAGCCGAGGCAGAAGCCGGCGGAGCATCTGAGCCGAGCCGAGGAGAGCAAGCCACGTCGTCGTCATCTTCTTCTTCAAGCTCTGTTCCTGATGACGATGAAGACACGTTCTTTAATCTTCCAGATCTCTTCACTGATGGGAACATTAATGGAGTCTGCTCATATTTTTCTTGGAATTTATGTGCTGTAGCCGATAGTGGGTTCAAGCTTGATTATGAGCCATTTTTGTGGGAAAGATATTACTAG 882 0.4694 MRVASVVVFLVRTKAHVGNRQWRIHRKLAIKLFDTCASYTPFHSLFFRTLSQINMESDNNNFSTIPSSSSSSSSTSTSSPTVSCLKFKHDDQSEGDHLNDKHKIVSKKKRQRSESDDNDEGNKHSTYRGVRMRAWGKWVSEIREPRKKSRIWLGTYSTAEMAARAHDVAALAIKGQSAYLNFPELAPQLPLPASTAPKDIQAAAAKAAATFCQAEAEAGGASEPSRGEQATSSSSSSSSSVPDDDEDTFFNLPDLFTDGNINGVCSYFSWNLCAVADSGFKLDYEPFLWERYY 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1132 293 MobiDBLite consensus disorder prediction 109 125 - -
Prci12g1132 293 MobiDBLite consensus disorder prediction 87 102 - -
Prci12g1132 293 MobiDBLite consensus disorder prediction 63 125 - -
Prci12g1132 293 CDD AP2 125 185 IPR001471 GO:0003700|GO:0006355
Prci12g1132 293 PRINTS Ethylene responsive element binding protein signature 127 138 IPR001471 GO:0003700|GO:0006355
Prci12g1132 293 PRINTS Ethylene responsive element binding protein signature 149 165 IPR001471 GO:0003700|GO:0006355
Prci12g1132 293 MobiDBLite consensus disorder prediction 225 244 - -
Prci12g1132 293 ProSiteProfiles AP2/ERF domain profile. 126 183 IPR001471 GO:0003700|GO:0006355
Prci12g1132 293 MobiDBLite consensus disorder prediction 216 244 - -
Prci12g1132 293 Gene3D AP2/ERF domain 126 184 IPR036955 GO:0003700|GO:0006355
Prci12g1132 293 SMART rav1_2 126 189 IPR001471 GO:0003700|GO:0006355
Prci12g1132 293 FunFam Ethylene-responsive transcription factor 2 125 184 - -
Prci12g1132 293 MobiDBLite consensus disorder prediction 63 86 - -
Prci12g1132 293 SUPERFAMILY DNA-binding domain 125 184 IPR016177 GO:0003677
Prci12g1132 293 Pfam AP2 domain 127 175 IPR001471 GO:0003700|GO:0006355
Prci12g1132 293 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 94 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1132 Prci-Chr12 17529649 17537083 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1132 121 288 AP2-EREBP Transcription Factor Family AT2G44940 52.736 1.61e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci12g1132 AP2 6.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1132 - - pcin:129289175 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g1132 12 17529649 17537083 Prci12g1132 12 17529649 17537083 ECH