Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1130 ATGTTTGGGCGTGCACCAGCAAGGAGTGATAACACCAAATATTATGAAATTCTTGGTGTTTCAAAAAATGCTAGTCAGGATGAACTCAAAAAGGCCTATAAAAGGGCTGCAATCAAGAATCATCCAGATAAAGGTGGAGATCCTGAAAAGTTCAAGGAGTTAGCTCAAGCATATGAGGTGCTCAGTGATCCTGAAAAGAGAGAAGTGTATGACCAGTATGGTGAAGGTGCCCTTAAGGATGGAATGGGAGGAGGAGGAGGTGGTCCTTTTCACAATCCATTTGATATATTTGAGTCATTCTTTGGGGGCTCAACCTTTGGCGGCAGCAGTAGTTCACGTGGAAGAAGGCAGAAACATGGTGAAGAGGTGGTGCATACTTTGAAGGTTTCTTTGGAGGATCTATACAATGGCACCACAAAGAAATTATCTCTTTCTAGAAATGTACTTTGCGCAAAATGTAAAGGGAAAGGTACTAAAAGTGGAACAGCAGGGAGATGCTATGGATGTCAAGGCACAGGTATGAAGGTTACAAGAAGACAGATTGGACTGGGTATGATTCAACAAATGCAACATGTCTGTCCTGATTGCAGAGGAACTGGTGAGGTTATTAGTGAGAGGGATAAATGCCCTCCGTGCAAGGGAAACAAAGTCACCCAGGAAAAGAAAGTGCTAGAGGTGCATGTTGAGAAAGGGATGCAACAAGGCCAGAAGATTGTGTTTGAAGGGCAAGCTGATGAAGCTCCTGACACAATCGCAGGAGACATTGTTTTCATCGTACAAGTAAAGGAGCACCCCAAGTTCAAGAGGAAGCATGATGACCTCTATGTTGAGCATAACCTCAGTTTAACTGAAGCACTTTGTGGTTTCCAGTTTGTCATTACCCATATGGATGGGAGGCAACTCCTAATCAAATCAAACCCCGGGGAAGTCATCAAGCCAGGTCAATATAAAGCGATAAATGACGAGGGCATGCCGCATCATAACAGGCCGTTCATGAGGGGCCGTCTATACATCCAATTTAACGTTGATTTCCCAGACTCAGGGTTCCTCACCCCTGACCAATGCAAATTATTGGAAACTGTGTTACCTCGGAAGCCAAGCAAGCAGTTGACAGATACGGAACTGGATGATTGTGAGGAAACCACTCTGCATGATGTTAACATTGAGGAAGAGATGAATCGAAAGAAGCAACAATATCAGGAGGCATACGACGAAGATGATGATGAGCCATCAATGCCCCGAGTGCAGTGTGCTCAGCAGTAA 1263 0.4442 MFGRAPARSDNTKYYEILGVSKNASQDELKKAYKRAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREVYDQYGEGALKDGMGGGGGGPFHNPFDIFESFFGGSTFGGSSSSRGRRQKHGEEVVHTLKVSLEDLYNGTTKKLSLSRNVLCAKCKGKGTKSGTAGRCYGCQGTGMKVTRRQIGLGMIQQMQHVCPDCRGTGEVISERDKCPPCKGNKVTQEKKVLEVHVEKGMQQGQKIVFEGQADEAPDTIAGDIVFIVQVKEHPKFKRKHDDLYVEHNLSLTEALCGFQFVITHMDGRQLLIKSNPGEVIKPGQYKAINDEGMPHHNRPFMRGRLYIQFNVDFPDSGFLTPDQCKLLETVLPRKPSKQLTDTELDDCEETTLHDVNIEEEMNRKKQQYQEAYDEDDDEPSMPRVQCAQQ 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1130 420 CDD DnaJ 14 63 IPR001623 -
Prci12g1130 420 MobiDBLite consensus disorder prediction 382 420 - -
Prci12g1130 420 SUPERFAMILY HSP40/DnaJ peptide-binding domain 123 265 IPR008971 GO:0006457|GO:0051082
Prci12g1130 420 ProSiteProfiles Zinc finger CR-type profile. 137 221 IPR001305 GO:0031072|GO:0051082
Prci12g1130 420 Gene3D - 265 346 - -
Prci12g1130 420 Pfam DnaJ central domain 150 216 IPR001305 GO:0031072|GO:0051082
Prci12g1130 420 Hamap Chaperone protein DnaJ [dnaJ]. 10 397 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Prci12g1130 420 Gene3D DnaJ domain 10 112 IPR036869 -
Prci12g1130 420 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 11 403 IPR044713 GO:0006457|GO:0030544
Prci12g1130 420 Pfam DnaJ C terminal domain 124 345 IPR002939 -
Prci12g1130 420 CDD DnaJ_zf 150 216 IPR001305 GO:0031072|GO:0051082
Prci12g1130 420 PRINTS DnaJ domain signature 15 33 IPR001623 -
Prci12g1130 420 PRINTS DnaJ domain signature 46 66 IPR001623 -
Prci12g1130 420 PRINTS DnaJ domain signature 66 85 IPR001623 -
Prci12g1130 420 SMART dnaj_3 12 66 IPR001623 -
Prci12g1130 420 Coils Coil 385 409 - -
Prci12g1130 420 SUPERFAMILY HSP40/DnaJ peptide-binding domain 267 357 IPR008971 GO:0006457|GO:0051082
Prci12g1130 420 Gene3D - 113 264 - -
Prci12g1130 420 FunFam DnaJ subfamily A member 2 150 216 - -
Prci12g1130 420 MobiDBLite consensus disorder prediction 382 402 - -
Prci12g1130 420 Gene3D - 150 216 - -
Prci12g1130 420 Pfam DnaJ domain 13 71 IPR001623 -
Prci12g1130 420 CDD DnaJ_C 123 347 - -
Prci12g1130 420 FunFam dnaJ protein homolog 10 111 - -
Prci12g1130 420 ProSiteProfiles dnaJ domain profile. 13 74 IPR001623 -
Prci12g1130 420 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 147 219 IPR036410 -
Prci12g1130 420 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Prci12g1130 420 FunFam DnaJ subfamily A member 2 264 346 - -
Prci12g1130 420 SUPERFAMILY Chaperone J-domain 9 106 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1130 Prci-Chr12 17510439 17515037 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1130 5 112 C2H2 Transcription Factor Family AT1G74250 37.288 2.46e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1130 K09503 - gmx:100800590 701.049