Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1082 ATGGAGCTCCACAAACTCGAAACCCCCAAAACTAACAGTGACCAAGTCGTCATCAACATGGATAATCATCAGCAACATCCAAACCCTAAACAAGATCATGCTTCTCAAGAACACCCTACCAGTACTCTCTCTCAATCCCATCCCGGAAACAGAACACTAAAACGTCTCAATTTTTCCAAACCAAAGTCACGTTTTGAAGAGATCAACTACCCCATCCCCCAACCCAAACCAGCGTACAATCCCATCCCTGAATCAGATGATCAACAGCCCTTGAATTCGCAACCAGAAAACCCTACTAACTACTCATCCACCGACGACGATGACGACGAATGGTTCGAAAACGGTGACGAGTACGGCTGTGACGACGCGGATGAAGCCACCGGAAAGTATAGGAAGAAGAGGAAGCGAAAGATCAACAAGAGGGCTTTACTGGAATGGACTTTGTTTCTCATCATCATGACTTGCCTGATATGTTCTCTTACTATTAAATCTCTCAAGCACAAGATTCAGTGGGGCCTAGAGATCTGGAAATGGTGCTTGCTGGTGATGGTAATCTTCTGTGGCCGTCTAGTCTCCGAATGGGTAGTCCGGATCATCGTGTTTCTCATTGAACGAAACTTCATGTTGAGAGAGAAAGTACTCTACTTCGTGTACGGTCTTCGAAAGAGTTTCCAGAACTGCGTGTGGTTGGCACTAGTTTTGATCGCGTGGACGATTATGTTCCAGGAGGCTCATAACAAAAACAAAGTCCTCAAGAAGTTCTTCAGAGCTCTGATCGCCATCCTCGTCGGCGCGACCATATGGCTGCTAAAGATAGTACTAGTTAAAGTTCTAGCGTCATCGTTTCACGTCGCAGCTTTCTTTGACAGAATGAAAGAGAGTGTTTTCCATCACTACGTGTTGGAAGCACTCTCTGGGCCGCCGTTGGACGAGGACGAGATGGAGCTGCCGGCGCGGAGGCAGTTGCAGGCGTCGAAGTCGATGCCGGCGAGGCTAAGGTACGAGAAGTCTCAGCCGTTGAAGTCGAAGTCGAGGAAGGCCGGGGATGGGGCGAGGAGGATTGACATTGAGAAGCTCAAGAGGCTGAGCATGGATGGGAGAGCGACGGCGTGGAGCGTGAAGAGGCTGGTGAGCTACGTCATGTCGTCGGGGCTGTCGACGATTTCGAGGACGGTGGACGATTTTGCAAACGCCGAGTCTGAGATTAGCAGCGAGTGGGAGGCTAGGACTTGTGCTCAGAGGATATTCAAGAATGTTGCAAAGGATGGGGCCAAATACATAGAAGAAGAAGACTTACTCAGATTCTTGAAGAGAGACGAAGTGTACATGATTTTTCCTTTATTTGGAGGAGCACTGGAAACTGGAAAAATTACCAAGTCCTCGTTTCGAAATTGGGTGGTGCAAGCGTACGTAGAGAGAAAAGCATTGGCTCATTCATTGAACGATACAAAGACAGCGGTTCGTCAACTACACAAACTAGCGAGTGCGATTGTAGTAGTGATCATTTCTGTGGTGTCCCTCTTGGTGATGGGTTTGGCCACAACCAAAGTCATCTTCGTCGTCACTTCTCAACTCTTGCTCGTAGGTTTTGTGTTCCAAAATATGTGCAAAACTGTCTTTGAATCCATCATCTTTGTCTTCCTCATGCACCCTTTCGATGTCGGAGATCGTTGTGTCATTGAGAACACTCAGATGATTGTGGAAGAGATGAACATATTGACAACAGTGTTCTTGAGATATGACGGCGAGAAAATATATTATCCAAATTCAGTTCTTCTGACGAAACCAATAAGCAATTTCAGAAGAAGCCCAGACATGGCTGACGCTGTGGAATTCACTATTGACGCCTCTACCTCTTTGGACAATATCACTGCCCTCAAGAAGGCCATTCAAGCGTACATTGAGAGCAAACCGAAGTACTGGAATCCAAAACACTCAGTGATAGTGAAGGAGATAGAGAACATGGACAAGATGAAGATGGCTCTCTGCGTTCAACACACCATTAACCACCAAAACTTTGCCGAGAGAAACGGCCGGCGATCGGAGCTTTTGCTCGAACTGAAGAGGATTTTCGAGAGCCTCGGCATTAAGTATCGTCTTCTTCCTCAAGAAGTTCATCTCACACAGGTTAACCTTGGCAGCAACAATAATGGAGGCTTCTCATTTTCATCTTACTAA 2178 0.4679 MELHKLETPKTNSDQVVINMDNHQQHPNPKQDHASQEHPTSTLSQSHPGNRTLKRLNFSKPKSRFEEINYPIPQPKPAYNPIPESDDQQPLNSQPENPTNYSSTDDDDDEWFENGDEYGCDDADEATGKYRKKRKRKINKRALLEWTLFLIIMTCLICSLTIKSLKHKIQWGLEIWKWCLLVMVIFCGRLVSEWVVRIIVFLIERNFMLREKVLYFVYGLRKSFQNCVWLALVLIAWTIMFQEAHNKNKVLKKFFRALIAILVGATIWLLKIVLVKVLASSFHVAAFFDRMKESVFHHYVLEALSGPPLDEDEMELPARRQLQASKSMPARLRYEKSQPLKSKSRKAGDGARRIDIEKLKRLSMDGRATAWSVKRLVSYVMSSGLSTISRTVDDFANAESEISSEWEARTCAQRIFKNVAKDGAKYIEEEDLLRFLKRDEVYMIFPLFGGALETGKITKSSFRNWVVQAYVERKALAHSLNDTKTAVRQLHKLASAIVVVIISVVSLLVMGLATTKVIFVVTSQLLLVGFVFQNMCKTVFESIIFVFLMHPFDVGDRCVIENTQMIVEEMNILTTVFLRYDGEKIYYPNSVLLTKPISNFRRSPDMADAVEFTIDASTSLDNITALKKAIQAYIESKPKYWNPKHSVIVKEIENMDKMKMALCVQHTINHQNFAERNGRRSELLLELKRIFESLGIKYRLLPQEVHLTQVNLGSNNNGGFSFSSY 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1082 725 MobiDBLite consensus disorder prediction 85 101 - -
Prci12g1082 725 MobiDBLite consensus disorder prediction 102 119 - -
Prci12g1082 725 MobiDBLite consensus disorder prediction 326 349 - -
Prci12g1082 725 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 11 710 IPR016688 -
Prci12g1082 725 Gene3D - 551 600 IPR023408 -
Prci12g1082 725 MobiDBLite consensus disorder prediction 1 119 - -
Prci12g1082 725 Pfam Mechanosensitive ion channel 492 697 IPR006685 GO:0016020|GO:0055085
Prci12g1082 725 SUPERFAMILY Sm-like ribonucleoproteins 541 600 IPR010920 -
Prci12g1082 725 MobiDBLite consensus disorder prediction 34 53 - -
Prci12g1082 725 FunFam Predicted mechanosensitive ion channel 551 600 - -
Prci12g1082 725 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1082 Prci-Chr12 15706609 15724313 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1082 25 711 Mechanosensitive Ion Channel Family AT5G12080 44.972 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1082 K22048 - qsu:112001851 982.245