Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1081 ATGGAGCTCCACAAACTCGAAACCCCCAAAACTAACAGTGACCAAGTCGTCATCAACATGGATAATCATCAGCAACATCCAAACCCTAAACAAGATCATGCTTCTCAAGAACACCCTACCAGTACTCTCTCTCAATCCCATCCCGGAAACAGAACACTAAAACGTCTCAATTTTTCCAAACCAAAGTCACGTTTTGAAGAGATCAACTACCCCATCCCCCAACCCAAACCAGCGTACAATCCCATCCCTGAATCAGATGATCAACAGCCCTTGAATTCGCAACCAGAAAACCCTACTAACTACTCATCCACCGACGACGATGACGACGAATGGTTCGAAAACGGTGACGAGTACGGCTGTGACGACGCGGATGAAGCCACCGGAAAGTATAGGAAGAAGAGGAAGCGAAAGATCAACAAGAGGGCTTTACTGGAATGGACTTTGTTTCTCATCATCATGACTTGCCTGATATGTTCTCTTACTATTAAATCTCTCAAGCACAAGATTCAGTGGGGCCTAGAGATCTGGAAATGGTGCTTGCTGGTGATGGTAATCTTCTGTGGCCGTCTAGTCTCCGAATGGGTAGTCCGGATCATCGTGTTTCTCATTGAACGAAACTTCATGTTGAGAGAGAAAGTACTCTACTTCGTGTACGGTCTTCGAAAGAGTTTCCAGAACTGCGTGTGGTTGGCACTAGTTTTGATCGCGTGGACGATTATGTTCCAGGAGGCTCATAACAAAAACAAAGTCCTCAAGAAGTTCTTCAGAGCTCTGATCGCCATCCTCGTCGGCGCGACCATATGGCTGCTAAAGATAGTACTAGTTAAAGTTCTAGCGTCATCGTTTCACGTCGCAGCTTTCTTTGACAGAATGAAAGAGAGTGTTTTCCATCACTACGTGTTGGAAGCACTCTCTGGGCCGCCGTTGGACGAGGACGAGATGGAGCTGCCGGCGCGGAGGCAGTTGCAGGCGTCGAAGTCGATGCCGGCGAGGCTAAGGTACGAGAAGTCTCAGCCGTTGAAGTCGAAGTCGAGGAAGGCCGGGGATGGGGCGAGGAGGATTGACATTGAGAAGCTCAAGAGGCTGAGCATGGATGGGAGAGCGACGGCGTGGAGCGTGAAGAGGCTGGTGAGCTACGTCATGTCGTCGGGGCTGTCGACGATTTCGAGGACGGTGGACGATTTTGCAAACGCCGAGTCTGAGATTAGCAGCGAGTGGGAGGCTAGGACTTGTGCTCAGAGGATATTCAAGAATGTTGCAAAGGATGGGGCCAAATACATAGAAGAAGAAGACTTACTCAGATTCTTGAAGAGAGACGAAGTGTACATGATTTTTCCTTTATTTGGAGGAGCACTGGAAACTGGAAAAATTACCAAGTCCTCGTTTCGAAATTGGGTGGTTGTATTACCAGGGGCCATTCCTTTCCAGATTACCTTCACAAGGCAAATGGTGCAAGCGTACGTAGAGAGAAAAGCATTGGCTCATTCATTGAACGATACAAAGACAGCGGTTCGTCAACTACACAAACTAGCGAGTGCGATTGTAGTAGTGATCATTTCTGTGGTGTCCCTCTTGGTGATGGGTTTGGCCACAACCAAAGTCATCTTCGTCGTCACTTCTCAACTCTTGCTCGTAGGTTTTGTGTTCCAAAATATGTGCAAAACTGTCTTTGAATCCATCATCTTTGTCTTCCTCATGCACCCTTTCGATGTCGGAGATCGTTGTGTCATTGAGAACACTCAGATGATTGTGGAAGAGATGAACATATTGACAACAGTGTTCTTGAGATATGACGGCGAGAAAATATATTATCCAAATTCAGTTCTTCTGACGAAACCAATAAGCAATTTCAGAAGAAGCCCAGACATGGCTGACGCTGTGGAATTCACTATTGACGCCTCTACCTCTTTGGACAATATCACTGCCCTCAAGAAGGCCATTCAAGCGTACATTGAGAGCAAACCGAAGTACTGGAATCCAAAACACTCAGTGATAGTGAAGGAGATAGAGAACATGGACAAGATGAAGATGGCTCTCTGCGTTCAACACACCATTAACCACCAAAACTTTGCCGAGAGAAACGGCCGGCGATCGGAGCTTTTGCTCGAACTGAAGAGGATTTTCGAGAGCCTCGGCATTAAGTATCGTCTTCTTCCTCAAGAAGTTCATCTCACACAGGTTAACCTTGGCAGCAACAATAATGGAGGCTTCTCATTTTCATCTTACTAA 2229 0.4675 MELHKLETPKTNSDQVVINMDNHQQHPNPKQDHASQEHPTSTLSQSHPGNRTLKRLNFSKPKSRFEEINYPIPQPKPAYNPIPESDDQQPLNSQPENPTNYSSTDDDDDEWFENGDEYGCDDADEATGKYRKKRKRKINKRALLEWTLFLIIMTCLICSLTIKSLKHKIQWGLEIWKWCLLVMVIFCGRLVSEWVVRIIVFLIERNFMLREKVLYFVYGLRKSFQNCVWLALVLIAWTIMFQEAHNKNKVLKKFFRALIAILVGATIWLLKIVLVKVLASSFHVAAFFDRMKESVFHHYVLEALSGPPLDEDEMELPARRQLQASKSMPARLRYEKSQPLKSKSRKAGDGARRIDIEKLKRLSMDGRATAWSVKRLVSYVMSSGLSTISRTVDDFANAESEISSEWEARTCAQRIFKNVAKDGAKYIEEEDLLRFLKRDEVYMIFPLFGGALETGKITKSSFRNWVVVLPGAIPFQITFTRQMVQAYVERKALAHSLNDTKTAVRQLHKLASAIVVVIISVVSLLVMGLATTKVIFVVTSQLLLVGFVFQNMCKTVFESIIFVFLMHPFDVGDRCVIENTQMIVEEMNILTTVFLRYDGEKIYYPNSVLLTKPISNFRRSPDMADAVEFTIDASTSLDNITALKKAIQAYIESKPKYWNPKHSVIVKEIENMDKMKMALCVQHTINHQNFAERNGRRSELLLELKRIFESLGIKYRLLPQEVHLTQVNLGSNNNGGFSFSSY 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1081 742 MobiDBLite consensus disorder prediction 85 101 - -
Prci12g1081 742 SUPERFAMILY Sm-like ribonucleoproteins 558 617 IPR010920 -
Prci12g1081 742 MobiDBLite consensus disorder prediction 326 349 - -
Prci12g1081 742 MobiDBLite consensus disorder prediction 102 119 - -
Prci12g1081 742 FunFam Predicted mechanosensitive ion channel 568 617 - -
Prci12g1081 742 Pfam Mechanosensitive ion channel 509 714 IPR006685 GO:0016020|GO:0055085
Prci12g1081 742 Gene3D - 568 617 IPR023408 -
Prci12g1081 742 MobiDBLite consensus disorder prediction 1 119 - -
Prci12g1081 742 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 11 727 IPR016688 -
Prci12g1081 742 MobiDBLite consensus disorder prediction 34 53 - -
Prci12g1081 742 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1081 Prci-Chr12 15706608 15724313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1081 25 728 Mechanosensitive Ion Channel Family AT5G12080 43.929 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1081 K22048 - qsu:112001851 971.459