Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1073 ATGGTGTTCAAGTTTAGAAAGGTTGATTCAACTCTTTCATCACTTGTACCACAACGGCTGATTATCTCCATATTCTTCATCTGCACTTCTTTGCTGTTCTCTTCATCCATCGCAGCTGGTGGTGATGAAGCAAATGCTCTTTTAAAGTGGAAATCTACCCTTGAGAATCAAAGTCAATCTACCTTGTCTTCTTGGAATGGAACAGATCCTTGCAGAAACTGGAAAGGAATTACATGCGATGAATCCATGTCTATCTCCACCATAAATCTTACAAGATTGGGGATACAAGGTACACTTTACAGTCTCAACTTCTCATCATTTAATAAACTCCAAGCCCTAGACATCAGTCAGAACGAGTTTGCAGGAATTATTCCTAGCCAACTCAGTAATTTGTCTAGTATTCATACGCTCAATATGAGTCATAATTTCTTGAGTGGTTCTGTCCCTCGAGAAATAGGAGCGTTGACTACTCTGAACATGCTTTCTATTAGTGTGAATAATCTCACAGGGAAAATTCCAGACGAGATTGGAATGCTGAGTAATCTCATAGTGCTTGCCTTGCAAAGAAACACTTTCTTAAATGGAAGAATCCCTCCTGCAATAGGAAATTTGACCAAACTACAATATCTTTCCCTCTTTCGATCTAATTTGTCAGGTCCTATTCCTTTTGAATTTGGGAATCTATATTCTCTCATTAGTTTGCACCTGTCAAATAACAACTTGTATGAGCCAATTCCATCCTCTTTGGGAAACTTGGTCAAATTAGAAGACCTCAAACTTGGAAACAACACTCTTTCTGGGCCTATTCCAGCTGCCATAGGAAATCTAACACGGCTCAACGTCTTATTTTTGAACATAAACAAATTGAATGGTAGCATTCCAATAGAGATGAATAACCTTACTAAATGGGAAATTTTAGAGCTGAGTGATAATGAATTCACTGGCCATTTGCCACAACAGGTTTGCCTTGGGGGATCACTTGAACATTTCACTGCACGTGCAAATAAATTCACTGGTCCAATTCCAAAAACCCTGAAGAATTGCTCTAGCCTTATCAGACTTAGACTTGATAACAACCAATTGGTTGGAAATATAACAAGTGACTTTGGTGTGTACCCAAGTTTGAAATACATTGATTTGAGTGGCAATAAAATTTATGGCCGCATTTCATCAAAGTGGGGAAAGTGTCATAATCTTACTTCACTTAGGATTTCCAACAACAATCTGTCTGGTAGTATACCTCCAGAACTTGGAGAGGCAACCAATCTTGGGGAATTTAATGTCTCTTCAAATCAGTTGATAGGAGAAATTCCAAAGGAATTGGGCAAGATGGTCTCATTGACTAGACTTTCTTTGAGAAACAATCAATTTTCAGGCAAGATTCCAATAGAAATAGGATCACTAAATCAACTTGAAGAATTGGAGTTGGTAGCAAATAAATTTACTGGCTCAATCCCCAAAGAGCTTGGAGGATTTTATAGGTTATGGCTCTTAAACTTGAGCAAAAATAAATTCGAAGGAAGCATTCCCATTGAGTTTGGTCGGTTGCAGGCATTGCAAGAACTTGATCTTAGTGAGAATATGTTGAGGGGAAGAATACCCAGAACACTTGGAGCACTAAAGATGCTACGAATTTTGAACATTTCGCATAACAGCCTCTTTGGAACCATTCCATCCAATTTTGATGACATGTCAAGCTTGACATTTGTTGACATATCATACAACCATTTAGAAGGACCTCTTCCGAACATTCCTGCCTTTCAAAGCATTACATTTGAGGCAGTAAGGAATAACACTAGTTTATGTGGTAATGTTACTAGGTTGGAGCATTGCAATAGAAGTATCAATAACCAACACGGTCATATGAATCAAATAGTGAAGCTATTGATGTCATTACTACTATGTTTTGCAGCTTTAGTACTAATAGCAGGTGGAATTTCTTGTATTGTGGTTCAAAAGTCAAAGCAAACCAAAAGCCAAGATGGAGAAGCACTAAATCTAAATTTTTTCTCCATTTGGCATTTTGATGGGAGAATTTTGCATGAAAAAGTTATTGAAGCAACGGAAGATTTTAATGACAAGTATCTCATTGGGGTGGGAGCACAAGGTAGTGTTTACAAGGCTGAGTTACTTGAAGGTCAATTTTTTGCTGTGAAGAAACTTCATCCACATTGTAATACATATCTCTCCAATCTAAAAGTGTTTCCAAGTGAAATTCAAGCATTGACTGAAATCAAACATCGTAACGTAGTGAAGTTACTTGGGTATTTTTCAAATTCACGCCTATCATTCTTGATCTATGAGTTCTTTGGGTTAAAGAGAAGAGATGGAAGAAGAGGAATGGGTGCGATACCCTGA 2358 0.3774 MVFKFRKVDSTLSSLVPQRLIISIFFICTSLLFSSSIAAGGDEANALLKWKSTLENQSQSTLSSWNGTDPCRNWKGITCDESMSISTINLTRLGIQGTLYSLNFSSFNKLQALDISQNEFAGIIPSQLSNLSSIHTLNMSHNFLSGSVPREIGALTTLNMLSISVNNLTGKIPDEIGMLSNLIVLALQRNTFLNGRIPPAIGNLTKLQYLSLFRSNLSGPIPFEFGNLYSLISLHLSNNNLYEPIPSSLGNLVKLEDLKLGNNTLSGPIPAAIGNLTRLNVLFLNINKLNGSIPIEMNNLTKWEILELSDNEFTGHLPQQVCLGGSLEHFTARANKFTGPIPKTLKNCSSLIRLRLDNNQLVGNITSDFGVYPSLKYIDLSGNKIYGRISSKWGKCHNLTSLRISNNNLSGSIPPELGEATNLGEFNVSSNQLIGEIPKELGKMVSLTRLSLRNNQFSGKIPIEIGSLNQLEELELVANKFTGSIPKELGGFYRLWLLNLSKNKFEGSIPIEFGRLQALQELDLSENMLRGRIPRTLGALKMLRILNISHNSLFGTIPSNFDDMSSLTFVDISYNHLEGPLPNIPAFQSITFEAVRNNTSLCGNVTRLEHCNRSINNQHGHMNQIVKLLMSLLLCFAALVLIAGGISCIVVQKSKQTKSQDGEALNLNFFSIWHFDGRILHEKVIEATEDFNDKYLIGVGAQGSVYKAELLEGQFFAVKKLHPHCNTYLSNLKVFPSEIQALTEIKHRNVVKLLGYFSNSRLSFLIYEFFGLKRRDGRRGMGAIP 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1073 785 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 254 770 - -
Prci12g1073 785 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 300 615 - -
Prci12g1073 785 Pfam Leucine rich repeat N-terminal domain 42 80 IPR013210 -
Prci12g1073 785 SUPERFAMILY Protein kinase-like (PK-like) 678 771 IPR011009 -
Prci12g1073 785 FunFam Leucine-rich repeat receptor protein kinase EMS1 197 296 - -
Prci12g1073 785 Gene3D Ribonuclease Inhibitor 192 255 IPR032675 -
Prci12g1073 785 Gene3D Ribonuclease Inhibitor 256 322 IPR032675 -
Prci12g1073 785 Pfam Leucine rich repeat 497 553 IPR001611 GO:0005515
Prci12g1073 785 Gene3D Ribonuclease Inhibitor 323 614 IPR032675 -
Prci12g1073 785 Gene3D Phosphorylase Kinase; domain 1 650 769 - -
Prci12g1073 785 FunFam Leucine-rich repeat receptor protein kinase MSP1 653 769 - -
Prci12g1073 785 Gene3D Ribonuclease Inhibitor 40 191 IPR032675 -
Prci12g1073 785 SUPERFAMILY L domain-like 327 603 - -
Prci12g1073 785 Pfam Protein kinase domain 692 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1073 785 SUPERFAMILY L domain-like 43 318 - -
Prci12g1073 785 SMART LRR_typ_2 179 204 IPR003591 -
Prci12g1073 785 SMART LRR_typ_2 540 563 IPR003591 -
Prci12g1073 785 SMART LRR_typ_2 276 300 IPR003591 -
Prci12g1073 785 SMART LRR_typ_2 131 155 IPR003591 -
Prci12g1073 785 SMART LRR_typ_2 396 420 IPR003591 -
Prci12g1073 785 SMART LRR_typ_2 516 539 IPR003591 -
Prci12g1073 785 SMART LRR_typ_2 228 252 IPR003591 -
Prci12g1073 785 SMART LRR_typ_2 444 468 IPR003591 -
Prci12g1073 785 FunFam Nuclear pore complex protein NUP107 40 193 - -
Prci12g1073 785 ProSiteProfiles Protein kinase domain profile. 691 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1073 Prci-Chr12 15620753 15623375 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1073 20 770 Receptor kinase-like Gene Family AT4G08850 39.376 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci12g1073 Pkinase 1.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1073 - - pcin:129289161 988.408