Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1064 ATGGCCGGCCTTGACTTAGGTTCAGCATCTCACTTTGTTCATCATCAGCTTCAACGCCCTGATCTTCACTCCAATCATGAAGATGACAACCTGCAGGATCAGGACGACGATGACCCTCAAGGGCTTGAGCTAGTTACTCCGGGAGGATCTGGTGGCGGTGGCGAGGTTAGCGGTCGCCGGCCAAGGGGACGGCCGCCTGGCTCGAAGAACAAGCCAAAACCGCCGGTGATCATAACCAGAGAAAGTGCAAACACGCTTAGGGCTCATATCCTTGAAGTTAGCAGCGGCTCCGATGTCTTTGACTCTGTGGCGACCTATGCCAGGAAGCGGCAGCGAGGGATCTGCGTCCTGAGTGGCAGTGGCACCGTCACCAACGTCACCTTGCGGCAGCCAACTGCCGCCGGTGCCGTCGTGACCCTGCACGGGAGGTTTGAGATACTGTCCTTGGCCGGATCTTTTTTGCCGCCTCCGGCTCCGCCGGGAGCCACCAGCCTGACGATATTCCTCGCCGGAGGACAAGGTCAAGTTGTGGGAGGAAATGTTGTTGGTGCCTTGATAGCTGCTGGGCCTGTTATTGTTATTGCTTCTTCATTTTCCAACGTAGCATATGAAAGATTGCCTTTAGATGAAGACGAACCAATACAGATGCAGCAAGGTCAATCTTCCACCGGCGGCAGCGGTGGCAGCTCGTTCCCGGACCCGTCCTCAGGGCTTCCGTTCTTTAACCTGCCGTTAAACATGGCGCAGTTACCGGTTGATGGTTGGGCCGGAAACTCAGGTGGTGGGAGGCAACCATATTGA 801 0.5605 MAGLDLGSASHFVHHQLQRPDLHSNHEDDNLQDQDDDDPQGLELVTPGGSGGGGEVSGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSSGSDVFDSVATYARKRQRGICVLSGSGTVTNVTLRQPTAAGAVVTLHGRFEILSLAGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALIAAGPVIVIASSFSNVAYERLPLDEDEPIQMQQGQSSTGGSGGSSFPDPSSGLPFFNLPLNMAQLPVDGWAGNSGGGRQPY 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1064 266 ProSiteProfiles PPC domain profile profile. 83 220 IPR005175 -
Prci12g1064 266 Pfam Plants and Prokaryotes Conserved (PCC) domain 87 200 IPR005175 -
Prci12g1064 266 SUPERFAMILY AF0104/ALDC/Ptd012-like 83 214 - -
Prci12g1064 266 CDD DUF296 87 170 IPR005175 -
Prci12g1064 266 MobiDBLite consensus disorder prediction 19 77 - -
Prci12g1064 266 Gene3D - 86 218 - -
Prci12g1064 266 FunFam AT-hook motif nuclear-localized protein 86 213 - -
Prci12g1064 266 MobiDBLite consensus disorder prediction 214 238 - -
Prci12g1064 266 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 28 222 IPR014476 GO:0003680
Prci12g1064 266 MobiDBLite consensus disorder prediction 214 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1064 Prci-Chr12 15508473 15509663 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1064 1 266 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 67.230 2.87e-98 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1064 - - gmx:100814613 354.369