Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1050 ATGTCTACTTCACTTCTTCAATCAGCTTTCTGTTCCTCCTTCACTTCCCGTTCTTTGCTTACTCATAAATATTTTGCTGCGACTGATCGTTGCCCTGATATCTCACTACGAAACAGGATCAGGTGTAATTTAGTTGAGCCACTGAAGTTTAAGAATGGGAAACCAAATGATGTTATAGTCAATGGCGGAAATTCAATTCCCAGTTTCTTAGCACCAAATTCTCGTGTTCATGATTCAATTTTCAAAAATGATACTCGACTCCGAATTTTTTCGGGTACGGCAAATCCAGCTCTTTCGCAGGAAATTGCCTGCTACATGGGCCTGGAGCTTGGGAAAATAAAAATAAAGCGTTTTGCTGATGGTGAGATATATGTTCAGCTACAAGAGAGTGTCAGAGGATGTGATGTGTTTCTTGTGCAGCCCACATGTCCTCCTGCCAATGAAAATCTTATGGAGCTTCTTATAATGATTGATGCCTGTAGGAGGGCTTCCGCCAAAAATATTACTGCAGTCATTCCATATTTTGGATATGCTAGAGCTGATAGGAAGAGTCAAGGGCGTGAATCCATTGCCGCCAAGCTTGTAGCCAATTTAATTACAGAAGCAGGTGCCAATCGAGTCCTTGCTTGTGACCTTCATTCTGGGCAGTCTATGGGCTATTTTGATATTCCTGTGGATCATGTTTATGGGCAGCCTGTGATACTTGATTATCTCGCTAGCAAGACTATTTGCTCAGATGATTTGGTAGTTGTCTCACCAGATGTTGGTGGTGTTGCTAGAGCACGTGCTTTTGCAAAAAAATTATCTGATGCGCCTTTGGCTATTGTGGATAAAAGACGCCATGGTCACAATGTTGCAGAGGTGATGAATTTGATAGGAGATGTGAAAGGAAAAGTAGCAGTTATGGTAGATGACATGATTGATACTGCTGGGACTATTTCCAAAGGTGCCTCTCTATTGCATCAAGAGGGGGCAAGAGAAGTCTATGCGTGTAGTACACATGCTGTATTCAGTCCTCCTGCTATAGAAAGGCTATCAAGTGGCGTGTTTCAAGAAGTTATCATAACAAATACAATTCCAGTGGCTGAGAAGAACTATTTTCCTCAGTTAACAGTCTTGTCGGTGGCAAACCTTCTGGGGGAAACTATATGGCGTGTTCATGATGATTGCTCAGGTGGAATTGAACCTTATTCCAATTTGGGCATTGATTGA 1212 0.42 MSTSLLQSAFCSSFTSRSLLTHKYFAATDRCPDISLRNRIRCNLVEPLKFKNGKPNDVIVNGGNSIPSFLAPNSRVHDSIFKNDTRLRIFSGTANPALSQEIACYMGLELGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKSQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLASKTICSDDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTISKGASLLHQEGAREVYACSTHAVFSPPAIERLSSGVFQEVIITNTIPVAEKNYFPQLTVLSVANLLGETIWRVHDDCSGGIEPYSNLGID 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1050 403 Pfam N-terminal domain of ribose phosphate pyrophosphokinase 87 203 IPR029099 -
Prci12g1050 403 SMART Pribosyltran_N_2 87 203 - -
Prci12g1050 403 Gene3D - 230 373 IPR029057 -
Prci12g1050 403 Pfam Phosphoribosyl synthetase-associated domain 288 391 IPR005946 GO:0000287|GO:0004749|GO:0009165
Prci12g1050 403 NCBIfam ribose-phosphate diphosphokinase 88 390 IPR005946 GO:0000287|GO:0004749|GO:0009165
Prci12g1050 403 PANTHER RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER 86 391 IPR005946 GO:0000287|GO:0004749|GO:0009165
Prci12g1050 403 FunFam Ribose-phosphate pyrophosphokinase 90 242 - -
Prci12g1050 403 SUPERFAMILY PRTase-like 152 388 IPR029057 -
Prci12g1050 403 CDD PRTases_typeI 246 358 IPR000836 -
Prci12g1050 403 Hamap Putative ribose-phosphate pyrophosphokinase [prs]. 87 397 IPR037515 GO:0004749
Prci12g1050 403 ProSitePatterns Phosphoribosyl pyrophosphate synthase signature. 211 226 IPR000842 GO:0000287|GO:0004749|GO:0009156|GO:0044249
Prci12g1050 403 Gene3D - 90 388 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1050 Prci-Chr12 14990500 14998670 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1050 220 367 PRT Gene Family AT2G16570 31.395 9.61e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1050 K00948 - qsa:O6P43_026846 679.093