Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1038 ATGCCTCCTAGGAAGAAACCCAGCTCTTCTAAGAAATCGAATCTGAGCAGCCAGGCTCAGCCTTCTAAGTTCGGCATTCAACATTTTTTTGAGCGCCACACCCAGAATGCTCTTGTGGCCTCTCAGAAGCAGCCAAAAAATGATCCAGCTGCGAACCGTCCCATTTCTGCTCCCCAAGATTCCAAGTCTGTTGCATCTCCTAACTCTCATATTCCACCTGTTGCTGGGTCGCAAGCTGTCGCTCCAAACAATTTAGATTCCGTTCTTGCTAGAGCTGAAAGTAAATTGAACTCAGACTTGGCTGGGCCAAAAATTGAGAATTCAGAATCGCAAAAGCGTAAAGACACCCCGCAAGTTGGAGCAAATGAATACAATAACGTTTCGCAGAATACTCCTTCAGAGAATTTGTTAATACCAGGGTTTGATGCTGTGGAAAATCTCCCTGAGGCGTCTCCGGAAATTTCCAAGATTGTGCCTCATAAGCGCTTTAAGTTCTCGCCTGGGATGTTAATAAAACAGAGCCAGGATGATGGGGTTGATGAAGTCACATGGAAGATATCTCCTGTGAATGAAAGACTTCAAGCAGTTTCAAAACACATGCCTCAGATGATTCAGGCTTTGGCTGAATCTTCTAGAATCAACTTATTGCCCGTTGGGATTTCCTCAGAGAATCAGACTTCTCTGACTAAAGGTGGCAAATTTGAAAAGATACTTGCTTCACCATCTACAAAGGCTGCTGAGAGGTCAACAGTGTTGAAGAATGAAAAAGGCTTGAAACGTATAAACGCAGACCAAGACATGGTTTTTAACGTCAGTTCAACTGCTGTGAATGGTTCTGGAGTAATTACTGTACAGAGCCCCTTCCGAACTCCGCCATCTCTATCCTATTGCTCTGATAAGGTGCAGCTTGTCAGGGATGTTGAGCACAATGGACTATCTGACCAGCTTTATTTAAGACAGCATAAAAAGGCATTGCTTGAACTGTTAGATCAAGTCGAAGATGCCATTTGTGTTGAAGATGCTACAATCTGTGATAAAAGTGCAAATTACATTAAGTCTCAAGATGGAATTGCTGATAATCTGCCCATCAGAGTTGACTCTGCAGCAGAAAGCACTAGAATTCATAAGCCCAAAGAGGCCCTTGGTGGGTCCAGTTCTAATTATTTGGTCTTGGAGGTATCTGAAAAACATAGTCTTGCTAATTCATCTGCTTTGCAAGGCCCATACAAGGTGCTTCGTTTAATAAATGAACAAACTGGAGAAGAGAAGGCTGCAAACTTGTTGGAAGAGTGGTCTTACAGTGTTGTTGCACCTGGAGATACTGTGAATATAATTGGTCAATTTGATGATTGGGGGCATTGTGATGTAGATCATGATAATAATTTTTTGATTGTACACCCAGATATTCTGGTGTCTGGGTCTCGGGTAGCTGCTAGTTTTACTTGTCCAAGGAGAACTGTCTTAGATGAGAGGCTAAAATGTAATGAGCACTCAATTGCTGCATTAACTGGAACCTTACTTCACCAAATTTTTCAGGCTGGACTTATCAAGGATAGTCCTTCAACAAACTTCTTAGAGGAATATGCACGATTGGTACTCCAGAGAAACATTGAAAGCTTGTATGCATGTGGAGTAAATGAAAATGATGTGCACAAAACCTTGATAGACGCCATTCCACGAATATTAAATTGGATCAAACTGTTCAAGAATTCAGAGGAAAAGAGAGATGCTTATGTTGATTTTGGATGTGATGATGGGATAAAGAAAGTCAAAGTATCGGAGGTGCTTGATATTGAGGAAATGGCATGGGCTCCTCAGTATGGTTTGAAAGGGAATGATGCTTCTGTCAGTGTGAAAGTTTTACCTAAGGGAAATGAATCAGATGAAAAGGTCATGCCATTAGAGTTCAAAACTGGGAAAGCAATGTCTGGCCAGTCATCTATAGAACATCGTGCCCAAGTGATCTTGTACACTCTTCTGATGTCAGAAAGGTACCTAAAGACTATCGATTCTGGTCTTCTATATTATCTCCAGTCAGATCAGACGGAGGTAAGGGTTATTGTTGTTCAAAGATCTGACTTAGTTGGGCTAATCATGCGACGTCGTAATGAGCTTGCAAGTGATATTCTGAAAGCATTAACCACTCAACAACTGCCTCCAATGTTACAGAGTCTGAGCATTTGCCGAGGTTGTCGCCATCTTAATGTTTGTAGCATTTATCACCAAGATTCGGTGTGGCTGAAAAGGAAAAAGGAAAAAGATCCACGGGTCGATGAAAGACAAATCCTATCTGTGATGCAAGTGGAATGTGAAGGTGAAGGAGTTAGAGGTGACTGCCGCTAA 2343 0.4195 MPPRKKPSSSKKSNLSSQAQPSKFGIQHFFERHTQNALVASQKQPKNDPAANRPISAPQDSKSVASPNSHIPPVAGSQAVAPNNLDSVLARAESKLNSDLAGPKIENSESQKRKDTPQVGANEYNNVSQNTPSENLLIPGFDAVENLPEASPEISKIVPHKRFKFSPGMLIKQSQDDGVDEVTWKISPVNERLQAVSKHMPQMIQALAESSRINLLPVGISSENQTSLTKGGKFEKILASPSTKAAERSTVLKNEKGLKRINADQDMVFNVSSTAVNGSGVITVQSPFRTPPSLSYCSDKVQLVRDVEHNGLSDQLYLRQHKKALLELLDQVEDAICVEDATICDKSANYIKSQDGIADNLPIRVDSAAESTRIHKPKEALGGSSSNYLVLEVSEKHSLANSSALQGPYKVLRLINEQTGEEKAANLLEEWSYSVVAPGDTVNIIGQFDDWGHCDVDHDNNFLIVHPDILVSGSRVAASFTCPRRTVLDERLKCNEHSIAALTGTLLHQIFQAGLIKDSPSTNFLEEYARLVLQRNIESLYACGVNENDVHKTLIDAIPRILNWIKLFKNSEEKRDAYVDFGCDDGIKKVKVSEVLDIEEMAWAPQYGLKGMXDASVSVKVLPKGNESDEKVMPLEFKTGKAMSGQSSIEHRAQVILYTLLMSERYLKTIDSGLLYYLQSDQTEVRVIVVQRSDLVGLIMRRRNELASDILKALTTQQLPPMLQSLSICRGCRHLNVCSIYHQDSVWLKRKKEKDPRVDERQILSVMQVECEGEGVRGDCR 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1038 781 MobiDBLite consensus disorder prediction 34 73 - -
Prci12g1038 781 MobiDBLite consensus disorder prediction 1 79 - -
Prci12g1038 781 MobiDBLite consensus disorder prediction 114 134 - -
Prci12g1038 781 MobiDBLite consensus disorder prediction 99 134 - -
Prci12g1038 781 MobiDBLite consensus disorder prediction 7 24 - -
Prci12g1038 781 CDD DNA2_N-like 472 710 - -
Prci12g1038 781 PANTHER CRISPR-ASSOCIATED EXONUCLEASE CAS4 456 742 - -
Prci12g1038 781 Gene3D - 472 739 IPR011604 -
Prci12g1038 781 Pfam DNA replication factor Dna2 417 619 IPR014808 -
Prci12g1038 781 Pfam Domain of unknown function DUF83 627 739 IPR022765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1038 Prci-Chr12 14743439 14753795 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1038 1 743 Core DNA Replication Machinery Family AT1G08840 50.466 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1038 K10742 - qsa:O6P43_017137 857.055