Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1027 ATGGGAGAATCACAGCGGTTTTCTAGAGGGGCAGAAGCACTCCTTCATCTCTCTCCTGGATCTTCAATTTCTGTTGCTTATCATCCTCTTTTTGGTCCTCATGATGATCTCATCTTCCTAGAGCTTGACGAGAAACTTGTCCCAGAATTTCTGCATGAAAGGGTGGTTGTAAGAGGACAACCAGATGAAGATGCAGTTCTTTGCACTCAGTCCAAAACTTATTCTGTCAAGTTTGTTGGAACTTCCAATTCTGTATTCCTTGTACCACCAAATCAATCCGAATATCATCAACCTCCACAAGAGAGTGATGATCATAATCATCATGACCAAAAAGTTGTTGCATCTGTGATCAAAGTTGTACCTGGTAACATGGAGCTTGTTGAGGTTGCTCCTAGACTTGATAAACTCAGGTCTCTTCTTTCAGAGAACCCTTACAGATGTGATGAGTTAGAAGTAGAATATTTAGAAGGCAATCATGAATCAAGAACAGGATTATACAATTGGAATGACCTCGTTGGCAATATTCAAGCTAGTGATGATGAAATAAGGTCTGGACTACGGGAACTTTCTGCAGTTGAGATTAATGGGCATTGGAGATTAGTGGATGAGACTTATATGTGCACCATTCTTAGAATGCTTTTGCACAATTCAGTGTTGAATGACTGGTCGCTCAATGCTCTTAATGAAGATGAAATTGTGAATATTCTTGAATCAGATGGATTTCCAAGGGTACTTGCTAAACACTGTTTGCATGTATTTGGTGAGAAAGAAAATGACTGTCTGGGTAGCTTTGTCTGGAAATTGGATGACAAGCGAGTGTGCGTGCAGTTTGCAAGGGAGATACTGAGAGGAGGAAAGAAAAAGTTGGAGAGTTTCATGGATGAATGGAGGAAGAAGATTCCAGATGGCATGCAACCCACTTTAGATTTTTTGGAAGGAGAAGTTCTGACTGAAAGGGTTGGTGTTGAGACTTGGATTCATGCCTTTAGTGTTTCATCTTTGCCATCCACTCCGGCGGAACGTTTCTCCATTCTTTTCAGAGAACGGAAGAAGTGGGATTGGAAGGATCTTCAGCCTTACATCAGGGATCTAAACGTGCCAGGTCTTTCTTCAGAAGCTTTGCTTCTCAAATACACCCGAAGAACACAGCCAACTTCAGATGCAGAACCAGTATTCAGTGCAAGATAA 1188 0.4141 MGESQRFSRGAEALLHLSPGSSISVAYHPLFGPHDDLIFLELDEKLVPEFLHERVVVRGQPDEDAVLCTQSKTYSVKFVGTSNSVFLVPPNQSEYHQPPQESDDHNHHDQKVVASVIKVVPGNMELVEVAPRLDKLRSLLSENPYRCDELEVEYLEGNHESRTGLYNWNDLVGNIQASDDEIRSGLRELSAVEINGHWRLVDETYMCTILRMLLHNSVLNDWSLNALNEDEIVNILESDGFPRVLAKHCLHVFGEKENDCLGSFVWKLDDKRVCVQFAREILRGGKKKLESFMDEWRKKIPDGMQPTLDFLEGEVLTERVGVETWIHAFSVSSLPSTPAERFSILFRERKKWDWKDLQPYIRDLNVPGLSSEALLLKYTRRTQPTSDAEPVFSAR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1027 395 Pfam Sister chromatid cohesion protein Dcc1 39 361 IPR019128 GO:0007064|GO:0031390
Prci12g1027 395 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 8 395 IPR019128 GO:0007064|GO:0031390
Prci12g1027 395 MobiDBLite consensus disorder prediction 89 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1027 Prci-Chr12 14466906 14471534 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1027 10 395 C3H Transcription Factor Family AT2G44580 57.143 1.67e-162 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1027 K11271 - gmx:100817511 600.127