Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1026 ATGCCTCCTAGGAAGAAACCCAGCTCTTCTAAGAAATCGAATCTGAGCAGCCAGGCTCAGCCTTCTAAGTTCGGCATTCAGCATTTTTTTGAGCGCCACACCCAGAATGCTCTTGTAGCCTCTCAGAAGCAGCCAAAAAATGATCCAGCTGCGAACCGTCCCATTTCTGCTCCCCAAGATTCCAAGTCTGTTGCATCTCCTAACTCTCATATTCCACCTGTTGCTGGGTCGCAAGCTGTCGCTCCAAACAATTTAGATTCCGTTCTTGCTAGAGCTGAAAGTAAATTGAACTCAGACTTGGCTGGGCCAAAAATTGAGAATTCAGAATCGCAAAAGCGTAAAGACACCCCGCAAGTTGGAGCAAATGAATTCAATAACGTTTCGCAGGATACTCCTTCAGAGAATTTGTTAATACCAGGGTTTGATGCTGTGGAAAATCTCCCTGAGGCGTCTCCGGAAATTTCCAAGATTGTGCCTCATAAGCGCTTTAAGTTCTCGCCTGGGATGTTAATAAAACAGAGCCAGGATGATGGGGTTGATGAAGTCACATGGAAGATATCTCCTGTGAATGAAAGACTTCAAGCAGTTTCAAAACACATGCCTCAGATGATTCAGGCTTTGGCTGAATCTTCTAGAATCAACTTATTGCCCGTTGGGATTTCCTCAGAGAATCAGACTTCTCTGACTAAAGGTGGCAAATTTGAAAAGATACTTGCTTCACCAGCTACAAAGGCTGCTGAGAGGTCAACAGTGTTGAAGAATGAAAAAGGCTTGAAACGTATAAACGCAGACCAAGACATGGTTTTTAACGTCAGTTCAACTGCTGTGAATGGTTCTGGAGTAATTACTGTACAGAGCCCCTTCCGAACTCCACCATCTCTATCCTATTGCTCTGATAAGCTAGTCAGGGATGTTGAGCACAATGGACTATCTGACCAGCTTTATTTAAGACAGCATAAAAAGGCATTGCTTGAACTGTTAGATCAAGTCGAAGATGCCATTTGTGTTGAAGATGCTACAATCTGTGATAAAAGTGCAAATTACATTAAGTCTCAAGATGGAATTGCTGATAATCTGCCCATCAGAGTTGACTCTGCAGCAGAAAGCACTATAATTCATAAGCCCAAAGAGGCCCTTGGTGGGTCCAGTTCTAATTATTTGGTCTTGGAGGTATCTGAAAAACATAGTCTTGCTAATTCATCTGCTTTGCAAGGCCCATACAAGGTGCTTCGTTTAATAAATGAACAAACTGGAGAAGAGAAGGCTGCAAACTTGTTGGAAGAGTGGTCTTACAGTGTTGTTGCACCTGGAGATACTGTGAATATAATTGGTCAATTTGATGATTGGGGGCATTGTGATGTAGATCATGATAATAATTTTTTGATTGTACACCCAGATATTCTGGTGTCTGGGTCTCGGGTAGCTGCTAGTTTTACTTGTCCAAGGAGAACTGTCTTAGATGAGAGGCTAAAATGTAATGAGCACTCAATTGCTGCATTAACTGGAACCTTACTTCACCAAATTTTTCAGGCTGGACTTATCAAGGATAGTCCTTCAACAAACTTCTTAGAGGAATATGCACGATTGGTACTCCAGAGAAACATTGAAAGCTTGTATGCATGTGGAGTAAATGAAAATGATGTGCACAAAACCTTGATAGACGCCATTCCACGAATATTAAATTGGATCAAACTGTTCAAGAATTCAGAGGAAAACAGAGATGCTTATGTTGATTTTGGATGTGATGATGGGATAAAGAAAGTCAAAGTATCTGAGGTGCTTGATATTGAGGAAATGGCATGGGCTCCTCAATATGGTTTGAAAGGGATGATTGATGCTTCTGTCAGTGTGAAAGTTCTACCTAAGGGAAATGAAGCAGATGAAAAGGTCATGCCATTAGAGTTCAAAACTGGGAAAGCAATGTCTGGCCAGTCATCCATAGAACACCGTGCCCAAGTGATCTTGTACACTCTTCTGATGTCAGAAAGGTACCTAAAGACTATTGATTCTGGTCTTCTATATTATCTCCAGTCAGATCAGACGGAGGGTATTGTTGTTCAAAGATCTGACTTAGTTGGGCTAATCATGCGACGTAATGAGCTTGCAAGTGATATTCTGAAAGCATTAACCACTCAACAACTGCCTCCAATGTTACAGGTACAAGGAGGAAGTGCAATGAGTAGTGGATTGGGAGATGTGTTTGATTCACATACTAATCACCTTTCATCTACTTATTGTAAGTTCCTCTGCCATTGGGATTGGCTGATTGACTTAGAAGCAAAAGAGACTGAGTATAACTTTTAAGGCAGTTTTGTAAAGAAAGAGATGTGGCGATCACATGCTTTTAAAAGTCAGAACAGTACTGGCCTTTCTTCTGTCATCCTTGATGCTTCAAATAATATTCCACGTCAGAAATCTCTTAAAGATAATTGTTTCATTTATCGTTTTGTACGATGTGGTCCATCTTCCCTATCTGAAGATGGCGATCCTTCTAAAGCTACAACAAATTATTTAGATCTGAAACTAAGAAGTGGAGACTATGTGATATTGAGCACTGAATCTAGCCGTCAAGCTATTGCCAGTGGGGTGATTACAGATATTAGTCATGCCCATGTGTCTGTTTCCTTTTCAAAGCGCCTGTGGATTCCTGGAAGCACCTCCACTAGCCAAGATCTCTATAAACAGGTTTGGAGAATTGATAAGGATGAAGGTGTGACTTCATTTGCTATTATGAGGTTTAATCTAGTACAGCTTTTTCTGCAAAATGCTCGAAGTACTCATCTGAGGAAAATGATTGTTGATCTTGAGGCTCCTAAATTTGACAGTGGATCTGTGCTCAGTCAGGACCCAATATCATATATGTGGTGGTCAGAGAAGAGTTTGAATGATGATCAGCGTAGATCAATCCTCAAGATTCTTACTGCAAAGGACTACGCACTCATATTAGGAATGCCCGGAACAGGAAAGACATCAACTATGGTTCATGCTGTGAAAGCATTATTAATCAGAGGCACAACTATTTTGCTGACAGCTTATACAAACTCAGCTGTAGATAAGTTACTTATCAAATTAAAAGCTCAGGGAATTGATTTTGTCCGTATTGGAAGACATGAAGCTGTGCATGAGGAGGTTAGAGGACACTGCCTTTCAGCAACAAATGTACAAAATGTTGATGAGATCAAAGTAAGGTTAGAACAAGTTAAAGTAGTTGCAGTTACATGTCTGGGCATCACCAGTCCCTTGCTTGCCAACAGGACTTTTGATGTATGCGTTATGGACGAAGCTGGGCAGACAACTCTACCAGTGTCCTTGGGCCCTCTCATGTTTTCCTCAATGTTTGTACTTGTGGGTGATCACTATCAACTTCCTCCGCTTGTCCAGAGTGCAGAGGCTCGAGAGAATGGTATGGGGATAAGTTTATTTTGTAGGCTCTCAGAAGCACATCCACAAGCAATTTCAGCACTACAGAGTCAGTACCGTATGTGTCAGGGCATCATGGACCTGTCAAATGCCTTGATATATGGTGATAGGTTAAGGTGCGGTTCCACTGAGATTGCCAATGCAAAACTTGCGTTTTCTACCTTAAAATGTGCCTTGCCTTGGCTAAAAAATGTTTTGAATCCATGCAGGCCAGTGATATTTATTGATACTGATAAATTGCCCGCTATAGAGGCAAGAGAACAGAAGGCTATAAATAACCCTGTTGAAGCTCACATAATTGTTGAGATAGCTAAGGCACTAATAAAAAATGGAATTGGAGAAGAACATGTTGGCATTATTACTCCCTACAATTCCCAGGCAAACCTCATCCGTCAAGCTACTTGCATGACATCGTTGGAGATTCATACCATTGACAAATACCAGGGTAGAGATAAAGATTGCATAATAGTATCTTTTGTGAGGTCCAGTGAAAATCCATCAAGCTGTACTTCTTTGCTTGGAGACTGGCACAGGATAAATGTGGCTCTCACACGTGGCAAGAAAAAGCTGATCATGGTGGGTTCTTGTAGAACTCTATCAAAGGTTCCATTACTGAAGCTTCTCATAAAAAAGGTTGAGGAACAATCAGGTATTGTTAGTTTGTCTAAGAAGGATATCTATCAAAAAGGAGAGCTCAAAAGGTGCTCCCAGATGAGATGA 4140 0.4116 MPPRKKPSSSKKSNLSSQAQPSKFGIQHFFERHTQNALVASQKQPKNDPAANRPISAPQDSKSVASPNSHIPPVAGSQAVAPNNLDSVLARAESKLNSDLAGPKIENSESQKRKDTPQVGANEFNNVSQDTPSENLLIPGFDAVENLPEASPEISKIVPHKRFKFSPGMLIKQSQDDGVDEVTWKISPVNERLQAVSKHMPQMIQALAESSRINLLPVGISSENQTSLTKGGKFEKILASPATKAAERSTVLKNEKGLKRINADQDMVFNVSSTAVNGSGVITVQSPFRTPPSLSYCSDKLVRDVEHNGLSDQLYLRQHKKALLELLDQVEDAICVEDATICDKSANYIKSQDGIADNLPIRVDSAAESTIIHKPKEALGGSSSNYLVLEVSEKHSLANSSALQGPYKVLRLINEQTGEEKAANLLEEWSYSVVAPGDTVNIIGQFDDWGHCDVDHDNNFLIVHPDILVSGSRVAASFTCPRRTVLDERLKCNEHSIAALTGTLLHQIFQAGLIKDSPSTNFLEEYARLVLQRNIESLYACGVNENDVHKTLIDAIPRILNWIKLFKNSEENRDAYVDFGCDDGIKKVKVSEVLDIEEMAWAPQYGLKGMIDASVSVKVLPKGNEADEKVMPLEFKTGKAMSGQSSIEHRAQVILYTLLMSERYLKTIDSGLLYYLQSDQTEGIVVQRSDLVGLIMRRNELASDILKALTTQQLPPMLQVQGGSAMSSGLGDVFDSHTNHLSSTYCKFLCHWDWLIDLEAKETEYNFXGSFVKKEMWRSHAFKSQNSTGLSSVILDASNNIPRQKSLKDNCFIYRFVRCGPSSLSEDGDPSKATTNYLDLKLRSGDYVILSTESSRQAIASGVITDISHAHVSVSFSKRLWIPGSTSTSQDLYKQVWRIDKDEGVTSFAIMRFNLVQLFLQNARSTHLRKMIVDLEAPKFDSGSVLSQDPXISYMWWSEKSLNDDQRRSILKILTAKDYALILGMPGTGKTSTMVHAVKALLIRGTTILLTAYTNSAVDKLLIKLKAQGIDFVRIGRHEAVHEEVRGHCLSATNVQNVDEIKVRLEQVKVVAVTCLGITSPLLANRTFDVCVMDEAGQTTLPVSLGPLMFSSMFVLVGDHYQLPPLVQSAEARENGMGISLFCRLSEAHPQAISALQSQYRMCQGIMDLSNALIYGDRLRCGSTEIANAKLAFSTLKCALPWLKNVLNPCRPVIFIDTDKLPAIEAREQKAINNPVEAHIIVEIAKALIKNGIGEEHVGIITPYNSQANLIRQATCMTSLEIHTIDKYQGRDKDCIIVSFVRSSENPSSCTSLLGDWHRINVALTRGKKKLIMVGSCRTLSKVPLLKLLIKKVEEQSGIVSLSKKDIYQKGELKRCSQMR 1380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1026 1380 MobiDBLite consensus disorder prediction 34 73 - -
Prci12g1026 1380 Gene3D - 889 1159 IPR027417 -
Prci12g1026 1380 CDD DNA2_N-like 470 705 - -
Prci12g1026 1380 Pfam AAA domain 1139 1337 IPR041679 -
Prci12g1026 1380 PANTHER DNA2/NAM7 HELICASE FAMILY 150 1357 IPR045055 -
Prci12g1026 1380 MobiDBLite consensus disorder prediction 114 135 - -
Prci12g1026 1380 Pfam DNA replication factor Dna2 415 617 IPR014808 -
Prci12g1026 1380 Gene3D - 1160 1372 IPR027417 -
Prci12g1026 1380 MobiDBLite consensus disorder prediction 7 24 - -
Prci12g1026 1380 Pfam AAA domain 962 1052 IPR041677 GO:0004386
Prci12g1026 1380 Pfam AAA domain 1065 1129 IPR041677 GO:0004386
Prci12g1026 1380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 960 1345 IPR027417 -
Prci12g1026 1380 FunFam DNA replication helicase Dna2 895 1159 - -
Prci12g1026 1380 CDD DEXXQc_DNA2 961 1161 IPR026851 GO:0017116
Prci12g1026 1380 CDD SF1_C_Upf1 1162 1354 IPR047187 -
Prci12g1026 1380 Gene3D - 470 751 IPR011604 -
Prci12g1026 1380 MobiDBLite consensus disorder prediction 1 136 - -
Prci12g1026 1380 FunFam DNA replication helicase 1160 1372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1026 Prci-Chr12 14421064 14445905 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1026 1 1103 Core DNA Replication Machinery Family AT1G08840 53.205 0.0 1058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1026 K10742 - cave:132181879 1769.98