Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0992 ATGAGATTCTCTTTCGTGTTTGGTGTGATCTTCTTTCTCTTAACCCTACTTTTAGCTTGTGATCGCCTTCGAAGGTACTGGTTTTGCTCAAATTCTCTGGCCGTCGGAGAAGAAAGCAGCTCCGATGGCGTCGTCGACGGCACTGATCATGAAAGCACTTTACAAAGAAACTCGAGGCCGCTTTTTTACTCCGAGGCGAAAAAGATCAGTTTCTTCAATCCTTTTTCGTCTGCTTCTTCTTCTTGTTCTTCATGTTGTTCAATCTGCTTCATGGATTATAAAGAAACTGATAAGTTGAGATTGCTTCCTAATTGTGGCCATCTTTATCACCTTCACTGTGTTGATTCATGGCTCAAGTTAAACCCTACTTGTCCCTTGTGTCGAACTTCTTCTTCTGTAGTTTCTAGGCGGGACACAGTGATCATCAGTGTTGCTTAG 438 0.4269 MRFSFVFGVIFFLLTLLLACDRLRRYWFCSNSLAVGEESSSDGVVDGTDHESTLQRNSRPLFYSEAKKISFFNPFSSASSSCSSCCSICFMDYKETDKLRLLPNCGHLYHLHCVDSWLKLNPTCPLCRTSSSVVSRRDTVIISVA 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0992 145 SMART ring_2 86 127 IPR001841 -
Prci12g0992 145 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 132 IPR045899 -
Prci12g0992 145 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 134 IPR013083 -
Prci12g0992 145 Pfam Ring finger domain 86 128 IPR001841 -
Prci12g0992 145 SUPERFAMILY RING/U-box 85 133 - -
Prci12g0992 145 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Prci12g0992 145 ProSiteProfiles Zinc finger RING-type profile. 86 128 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0992 Prci-Chr12 12974554 12975079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0992 51 130 C3H Transcription Factor Family AT2G35910 48.750 7.22e-21 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0992 - - pcin:129289096 207.608