Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0991 ATGAACCCTAATCGTTCTCCTTTTGAATCAGTTCAACATTACCTGATTGAAAATGGTCCTTATTCGTTCATGACTCTCATGAATGGCACCTTCACGGCGGCCGGCAACCCTACTTCCAACTTGAACTGCGACACGGCTTCGCCGGATCTGGGTGCTAGTATCCCCAGTGGTACGGTGTTTCCCGGCGAGAATGACCACACTGTGAAACCAGCTGGTGATAATTGGGTTAATGGAAATGATGCAGGATCCGTGGCATATGAGGAGAACGCGCCATGTAGACGGATGAATTACCGAGGAGTGAGGTGTCGGCAGCGGGGGAAGTTCGCGGCGGAGATCCGGGACCCGAAGAGGAACGGCGCAAGGACATGGCTTGGAACCTATGAGAGCGGGGAGGACGCAGCTTTGGCTTATGATAGAGCTGCTTTCAAGATGCGTGGTAGAAAAGCCAAGCTCAATTTCCCACACCTTATTGGATCGGAGCCACCGCCGGAAACGGCAACAGTGGTCATTAGAGAGAAGCGGCTCAGCTCGCCGGAACCTTCGTCGCCGTCGAACTGTACATCTGAGCATGATGGATCTCAAGGATCAAGTAAGAAGAAAAGCCTGGCCGCTCTACTGAACAAGTTAGCATCAAACAGAAGCCACGTCAGATTCTGA 657 0.5221 MNPNRSPFESVQHYLIENGPYSFMTLMNGTFTAAGNPTSNLNCDTASPDLGASIPSGTVFPGENDHTVKPAGDNWVNGNDAGSVAYEENAPCRRMNYRGVRCRQRGKFAAEIRDPKRNGARTWLGTYESGEDAALAYDRAAFKMRGRKAKLNFPHLIGSEPPPETATVVIREKRLSSPEPSSPSNCTSEHDGSQGSSKKKSLAALLNKLASNRSHVRF 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0991 218 ProSiteProfiles AP2/ERF domain profile. 96 154 IPR001471 GO:0003700|GO:0006355
Prci12g0991 218 PANTHER DNA-BINDING DOMAIN 83 196 IPR044808 GO:0003700|GO:0009873
Prci12g0991 218 MobiDBLite consensus disorder prediction 177 201 - -
Prci12g0991 218 SUPERFAMILY DNA-binding domain 97 155 IPR016177 GO:0003677
Prci12g0991 218 FunFam Ethylene-responsive transcription factor 2 95 155 - -
Prci12g0991 218 MobiDBLite consensus disorder prediction 173 203 - -
Prci12g0991 218 Gene3D AP2/ERF domain 96 155 IPR036955 GO:0003700|GO:0006355
Prci12g0991 218 CDD AP2 96 156 IPR001471 GO:0003700|GO:0006355
Prci12g0991 218 PRINTS Ethylene responsive element binding protein signature 97 108 IPR001471 GO:0003700|GO:0006355
Prci12g0991 218 PRINTS Ethylene responsive element binding protein signature 136 156 IPR001471 GO:0003700|GO:0006355
Prci12g0991 218 SMART rav1_2 96 160 IPR001471 GO:0003700|GO:0006355
Prci12g0991 218 Pfam AP2 domain 97 146 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0991 Prci-Chr12 12800578 12801249 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0991 95 190 AP2-EREBP Transcription Factor Family AT2G44840 67.677 9.10e-36 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci12g0991 AP2 3.1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0991 K09286 - pcin:129296372 216.083