Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0990 ATGTTTTCCAGCGGCGAGCATGACACCGCTATGAAAGAAGGTGATAGGACTAGTGTTAACAATGCCGGATCTGTGGCGCGTGAATGTAACGCGCCGCCAAGATGGAGGAATTGCAGAGGCGTGAGGCGGCAGCCATGGGGGAAGTTCGCGGCAGAGATCCGGGATCCAATGAGGAACGGAGCGAGAACTTGGTTGGGAACTTATGAGAGGGAAGAGGATGCAGCTTTGGCGTACGATAGGGCTGCTTTCAAGATGAGAGGTAGAAAAGCAAAGCTAAATTTTCCTCACCTCATTGGATCGGAACCACCGCCGGAGCTGGCAAGAGTAGTCGTCAGAAAGAAGCGGCACCGCTCACTGGAACCTTCATCGCCGTCAAACAGTACATCTGTGGATGACGGATCTCAAGGGTCATGTAAGAAGAAGAACCTGGCTGGTCTATTGAATAAGATAGCAACAAATTGA 462 0.513 MFSSGEHDTAMKEGDRTSVNNAGSVARECNAPPRWRNCRGVRRQPWGKFAAEIRDPMRNGARTWLGTYEREEDAALAYDRAAFKMRGRKAKLNFPHLIGSEPPPELARVVVRKKRHRSLEPSSPSNSTSVDDGSQGSCKKKNLAGLLNKIATN 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0990 153 Gene3D AP2/ERF domain 38 96 IPR036955 GO:0003700|GO:0006355
Prci12g0990 153 MobiDBLite consensus disorder prediction 1 33 - -
Prci12g0990 153 PANTHER DNA-BINDING DOMAIN 24 127 IPR044808 GO:0003700|GO:0009873
Prci12g0990 153 SUPERFAMILY DNA-binding domain 38 96 IPR016177 GO:0003677
Prci12g0990 153 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Prci12g0990 153 PRINTS Ethylene responsive element binding protein signature 77 97 IPR001471 GO:0003700|GO:0006355
Prci12g0990 153 SMART rav1_2 37 101 IPR001471 GO:0003700|GO:0006355
Prci12g0990 153 CDD AP2 39 97 IPR001471 GO:0003700|GO:0006355
Prci12g0990 153 MobiDBLite consensus disorder prediction 121 136 - -
Prci12g0990 153 ProSiteProfiles AP2/ERF domain profile. 37 95 IPR001471 GO:0003700|GO:0006355
Prci12g0990 153 MobiDBLite consensus disorder prediction 112 153 - -
Prci12g0990 153 Pfam AP2 domain 39 87 IPR001471 GO:0003700|GO:0006355
Prci12g0990 153 FunFam Ethylene-responsive transcription factor 2 37 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0990 Prci-Chr12 12785977 12786450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0990 39 133 AP2-EREBP Transcription Factor Family AT2G44840 64.762 2.66e-35 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci12g0990 AP2 8.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0990 K09286 - pcin:129296372 213.772