Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0989 ATGAACCCTAATCGTTCTCCTTTTGAATCAGTTCAACATTACCTGATTGAAGATGATCCTTATTCCTTCATGATTCACATGAATAATGGCTTCTTCACGGCGGCCGGGGACCCTACTTCCAACTTGAACTGCTACACGGCTTTGCCTGATCAGGGTGCTAGTAGCTCCACTGGTACGGTGTTTTCCGGCGAGAATGACCACACTGTGAAACGAGATGGTCATAATTGGGTTAATGGAAATGATGAAGGATCTGTGGGGCGTGAGGAGAACGCGCCACCTACATGGAGGAATCTGAACTACGACTCTGCTTTGCCGGAGCAGGGTGTTAGTAACTCCGGTGGTATGTCGTTTTGGGACGGGGATAATGACGACGGTATGAATTCAGGTGGTTATGACGATGATAAGGTTAATGGTAATACCACAGGATCTGTGGCGTGTGAAAAGAACGCGCCACCTCGATGGAGGAATTACCGAGGCGTGAGGCGGCGGCCATGGGGGAAGTTCACAGTGGAGATCCGGGACCCGAAGAGGAACGGCGCAAGGACATGGCTTGGAACCTATGAGAGCGGGGAGGACGCAGCTTTGGCTTATGACAGAGCTGCTTTCAAGATGCATGGCAGAAAAGCCAAGCTCAATTTCCCACACCTTATTGGATCGGAGCCGGCAATAGTAGTCATTGGAGAGAAGCGGGGCAGCTCGCCGGAACCTTTGTTGCCGTCAAACTGTACGACTGAGGATGATGGATCTCAAGGACCAAGTAAGAAGAAAAGCCTGGCTGGTCTATTGAACAAGTTAGCAACAAATAGAAGCCATGTCAGATTCTGTTGA 828 0.5 MNPNRSPFESVQHYLIEDDPYSFMIHMNNGFFTAAGDPTSNLNCYTALPDQGASSSTGTVFSGENDHTVKRDGHNWVNGNDEGSVGREENAPPTWRNLNYDSALPEQGVSNSGGMSFWDGDNDDGMNSGGYDDDKVNGNTTGSVACEKNAPPRWRNYRGVRRRPWGKFTVEIRDPKRNGARTWLGTYESGEDAALAYDRAAFKMHGRKAKLNFPHLIGSEPAIVVIGEKRGSSPEPLLPSNCTTEDDGSQGPSKKKSLAGLLNKLATNRSHVRFC 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0989 275 CDD AP2 156 216 IPR001471 GO:0003700|GO:0006355
Prci12g0989 275 SMART rav1_2 156 220 IPR001471 GO:0003700|GO:0006355
Prci12g0989 275 MobiDBLite consensus disorder prediction 230 256 - -
Prci12g0989 275 ProSiteProfiles AP2/ERF domain profile. 156 214 IPR001471 GO:0003700|GO:0006355
Prci12g0989 275 FunFam Ethylene-responsive transcription factor 2 155 215 - -
Prci12g0989 275 MobiDBLite consensus disorder prediction 67 93 - -
Prci12g0989 275 Gene3D AP2/ERF domain 155 215 IPR036955 GO:0003700|GO:0006355
Prci12g0989 275 PANTHER DNA-BINDING DOMAIN 128 246 IPR044808 GO:0003700|GO:0009873
Prci12g0989 275 PRINTS Ethylene responsive element binding protein signature 196 216 IPR001471 GO:0003700|GO:0006355
Prci12g0989 275 PRINTS Ethylene responsive element binding protein signature 157 168 IPR001471 GO:0003700|GO:0006355
Prci12g0989 275 Pfam AP2 domain 156 206 IPR001471 GO:0003700|GO:0006355
Prci12g0989 275 SUPERFAMILY DNA-binding domain 156 215 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0989 Prci-Chr12 12768166 12769337 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0989 156 245 AP2-EREBP Transcription Factor Family AT2G44840 66.667 1.28e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci12g0989 AP2 8.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0989 K09286 - pcin:129296372 214.927