Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0987 ATGAACCCTTGTCTTTCTCCTTTCGAATCAGTAGTTCAACAATATCTGACTGAAGATGATCCTTCCTTCATGACTCTCATAAATGGTTTATTCACCGGCAACCCTACTTGGAATCTGAACTACGACGCTGCTTTGCTGGAGCAGGGTGTTAGTAACTCCAGTGGTATGTCATTTTCCGGCGGGAATGATGATGACGGTATGAATTCGGGTGGTTATGACGATGGTAAGGTCAGTGGTAATACCACAGGATCTGTGGCGTGTGAAAAGAACGCGCCACCTAGATGGAGGAACTACCGAGACGGGACGCGGCGGCCATGGGGGAAGTCCAAGGCTGAGATCCGGGACCTGAAGAGGAACGGTGCAAGGACATGGCTCGGAACCAATGAGAGGGAGGAGGATCCAGCTTTGGCTTATGATAGAGCTGCTTTCAAGACGAAGGGTAGAAAAGCAAAGCTCAATTTTCCTCACCTCATTGGCTCAGAGCGGCGGAGACACCACCGGAGCTGGCAAGAACAGTTGTCCGAAAGAAGCGGCGCCACCCTCTTGAAGAAAAGCCTGGATGCTCTACCAAATGTGTTACCAACATATAGAAGCCATGTCAGAAGCTTGAAATATGGTGTGTGA 624 0.4968 MNPCLSPFESVVQQYLTEDDPSFMTLINGLFTGNPTWNLNYDAALLEQGVSNSSGMSFSGGNDDDGMNSGGYDDGKVSGNTTGSVACEKNAPPRWRNYRDGTRRPWGKSKAEIRDLKRNGARTWLGTNEREEDPALAYDRAAFKTKGRKAKLNFPHLIGSERRRHHRSWQEQLSERSGATLLKKSLDALPNVLPTYRSHVRSLKYGV 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0987 207 MobiDBLite consensus disorder prediction 82 106 - -
Prci12g0987 207 PRINTS Ethylene responsive element binding protein signature 137 157 IPR001471 GO:0003700|GO:0006355
Prci12g0987 207 PRINTS Ethylene responsive element binding protein signature 98 109 IPR001471 GO:0003700|GO:0006355
Prci12g0987 207 CDD AP2 97 157 IPR001471 GO:0003700|GO:0006355
Prci12g0987 207 SMART rav1_2 97 161 IPR001471 GO:0003700|GO:0006355
Prci12g0987 207 Gene3D AP2/ERF domain 96 156 IPR036955 GO:0003700|GO:0006355
Prci12g0987 207 SUPERFAMILY DNA-binding domain 98 156 IPR016177 GO:0003677
Prci12g0987 207 ProSiteProfiles AP2/ERF domain profile. 97 155 IPR001471 GO:0003700|GO:0006355
Prci12g0987 207 PANTHER DNA-BINDING DOMAIN 78 168 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0987 Prci-Chr12 12733209 12733832 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0987 98 160 AP2-EREBP Transcription Factor Family AT2G44840 73.016 1.17e-25 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0987 K09286 - pcin:129296372 131.724