Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0986 ATGATTCCTAACAATTATTCTGCTTTTGAATCGCCATTTCTTCAGCAACACAATGATCCTTCCTCTGCGTCTCTCATGAATAATAATAATAATTCCTTCTTCAAGACCACCTCTACTTCTAACCCTATCGGCGACGTCACCGCTTTGCCGGAACATGGCGTTCGTTGTAACTCCGGCGGTACGGTGCTTTCCAGTGAACGGCATGAAAACACCATGAAACCAGGTGGTAGTGATGGGGCTGATGTTAACACTGCTGCAGATCAGTCTGTGGCACGTGAAGGGAACGCGCCACCTAGATGGAGGAGTTACAGAGGCGTGAGGCGTCGGCCATGGGGGAAGTTTGCTGCGGAGATCCGGGACCCAGCGAGGAACGGCGCGAGAACGTGGTTAGGGACTTACGAGAGGGAAGAGGATGCAGCTTTGGCTTATGACAGAGCCGCTTTCGAGATGAGGGGTAGAAAAGCAAAGCTCAATTTTCCTCACCTCATTGGGTCGGAACCACCACCGCCGGAGCCGACAAGAGTAGTCGCCCACCAGAAGCGGCGACACTCGTCGGAACCTTCATCACGGTCGCCAGAGAAGAATGATGATGGATCTCAAGGGTCAAGTAAGAAGAAGAGCCTGGTTGGTCTGTTGAATAAGTTAGCAACCAATAGAAGCCACGTTAGAAGCTTGAAATGA 681 0.511 MIPNNYSAFESPFLQQHNDPSSASLMNNNNNSFFKTTSTSNPIGDVTALPEHGVRCNSGGTVLSSERHENTMKPGGSDGADVNTAADQSVAREGNAPPRWRSYRGVRRRPWGKFAAEIRDPARNGARTWLGTYEREEDAALAYDRAAFEMRGRKAKLNFPHLIGSEPPPPEPTRVVAHQKRRHSSEPSSRSPEKNDDGSQGSSKKKSLVGLLNKLATNRSHVRSLK 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0986 226 SMART rav1_2 102 166 IPR001471 GO:0003700|GO:0006355
Prci12g0986 226 CDD AP2 103 162 IPR001471 GO:0003700|GO:0006355
Prci12g0986 226 PANTHER DNA-BINDING DOMAIN 55 201 IPR044808 GO:0003700|GO:0009873
Prci12g0986 226 MobiDBLite consensus disorder prediction 1 29 - -
Prci12g0986 226 MobiDBLite consensus disorder prediction 159 226 - -
Prci12g0986 226 ProSiteProfiles AP2/ERF domain profile. 102 160 IPR001471 GO:0003700|GO:0006355
Prci12g0986 226 MobiDBLite consensus disorder prediction 202 226 - -
Prci12g0986 226 Pfam AP2 domain 103 152 IPR001471 GO:0003700|GO:0006355
Prci12g0986 226 PRINTS Ethylene responsive element binding protein signature 142 162 IPR001471 GO:0003700|GO:0006355
Prci12g0986 226 PRINTS Ethylene responsive element binding protein signature 103 114 IPR001471 GO:0003700|GO:0006355
Prci12g0986 226 Gene3D AP2/ERF domain 102 161 IPR036955 GO:0003700|GO:0006355
Prci12g0986 226 MobiDBLite consensus disorder prediction 61 81 - -
Prci12g0986 226 SUPERFAMILY DNA-binding domain 103 161 IPR016177 GO:0003677
Prci12g0986 226 FunFam Ethylene-responsive transcription factor 2 101 161 - -
Prci12g0986 226 MobiDBLite consensus disorder prediction 175 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0986 Prci-Chr12 12714985 12716411 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0986 103 188 AP2-EREBP Transcription Factor Family AT2G44840 73.256 1.06e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci12g0986 AP2 2.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0986 K09286 - pcin:129296372 183.726