Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0977 ATGATTCAGCACTTCAACGAATCCTACATGTTCGGATTCCATTGTCTCTCCGATGACTCTGAACATTCTTCTACTTTAGAAACAATCCGACAGCACCTTCTCGTAAACGAAACCGCCGACTTGCCTGCCTCTTCTCCGGCAACACTTTCCTACGCCGTCCCAATGCAAGGCCAGAGTTCAATGTATGACATTCATTACATCAATGAACTAGTTCCTGAAGTTTCCACCATTAATAACAGTATCAATGTTGATGCTGTGGTGGCGCGTGAGTGTAACGCGCCCCCGGTTGAACTGCATTTCCGGGGTGTTAGGCGGCGGCCTTGGGGGAAATACGCGGCGGAGATCAGAGATCCGGCTAAAGACGGTGCTAGGGTTTGGCTGGGAACTTATGATACAGCTGAAGATGCAGCTATAGCTTATGATCGAGCAGCTTATGAGATGCGTGGAGCTAAAGCCAAGCTTAATTTCCCTCTCCTTGTGGGCTCCAACGTGTGGGATTCGGTTCGAGCGAGTCGAAAGCACCGCGACCTCTCCACAGCCGCTTCTGCTGTCGGCGGCGGCGAGTATTCTTCGAAGCTTAAGCGGATAAGGAAGAGCTAG 600 0.5083 MIQHFNESYMFGFHCLSDDSEHSSTLETIRQHLLVNETADLPASSPATLSYAVPMQGQSSMYDIHYINELVPEVSTINNSINVDAVVARECNAPPVELHFRGVRRRPWGKYAAEIRDPAKDGARVWLGTYDTAEDAAIAYDRAAYEMRGAKAKLNFPLLVGSNVWDSVRASRKHRDLSTAASAVGGGEYSSKLKRIRKS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0977 199 PRINTS Ethylene responsive element binding protein signature 100 111 IPR001471 GO:0003700|GO:0006355
Prci12g0977 199 PRINTS Ethylene responsive element binding protein signature 123 139 IPR001471 GO:0003700|GO:0006355
Prci12g0977 199 ProSiteProfiles AP2/ERF domain profile. 99 157 IPR001471 GO:0003700|GO:0006355
Prci12g0977 199 Gene3D AP2/ERF domain 99 159 IPR036955 GO:0003700|GO:0006355
Prci12g0977 199 SUPERFAMILY DNA-binding domain 99 158 IPR016177 GO:0003677
Prci12g0977 199 SMART rav1_2 99 163 IPR001471 GO:0003700|GO:0006355
Prci12g0977 199 PANTHER DNA-BINDING DOMAIN 61 173 IPR044808 GO:0003700|GO:0009873
Prci12g0977 199 FunFam Ethylene-responsive transcription factor 2 99 158 - -
Prci12g0977 199 Pfam AP2 domain 99 149 IPR001471 GO:0003700|GO:0006355
Prci12g0977 199 CDD AP2 99 157 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0977 Prci-Chr12 12620979 12621846 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0977 71 175 AP2-EREBP Transcription Factor Family AT2G44840 56.604 9.35e-36 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci12g0977 AP2 1.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0977 K09286 - pcin:129297492 228.794