Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0976 ATGTCCTCTTCAACAACATCCATGATTCAGCACTTCAACAAATCCTACATGTTCGGATTCCATTATCTCTCCGATGATTCTGAACATTCTTCTACTTTAGAAGCAATCCAACAGCACCTTCTCGGCAATGAAACCGCTGACTTGCCTCCGTCTTATCCGGCAACACTTTCCGACCACGTCCCATTGCACGGCCAGAGTTCAATGTATGACATTCATTGCATCAATGAACTAGTTCCTGAATTTTCCACCATTAATAACAGCATCAATGTTGATGCTGATGTGGCGTGTAAGTATAACGCGCCCCCGGTTGAACGGCATTACCGTGGTGTTAGGAGGCGGCCTTGGGGGAAATACGCGGCGGAGATCAGAGATCCGGCTAAAAATGGTGGTAGGGTTTGGCTTGGAACTTATGATACAGCTGAAGATGCAGCTATAGCTTATGACAGAGCAGCTTATGAGATGCGTGGAGCTAAAGCCAAGCTTAATTTTCCTCTCCTTGTGGGCTCCAACGTGTGGGATTCGGTTCGAGCAACTCCACCGCGACCTCGCCATGGCCGCTGCTGCTGGCGGCGGCGGCGGCGGCGGCGAGCATCCTTCGAAGCTTAA 606 0.5017 MSSSTTSMIQHFNKSYMFGFHYLSDDSEHSSTLEAIQQHLLGNETADLPPSYPATLSDHVPLHGQSSMYDIHCINELVPEFSTINNSINVDADVACKYNAPPVERHYRGVRRRPWGKYAAEIRDPAKNGGRVWLGTYDTAEDAAIAYDRAAYEMRGAKAKLNFPLLVGSNVWDSVRATPPRPRHGRCCWRRRRRRRASFEA 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0976 201 PRINTS Ethylene responsive element binding protein signature 130 146 IPR001471 GO:0003700|GO:0006355
Prci12g0976 201 PRINTS Ethylene responsive element binding protein signature 107 118 IPR001471 GO:0003700|GO:0006355
Prci12g0976 201 Pfam AP2 domain 106 156 IPR001471 GO:0003700|GO:0006355
Prci12g0976 201 FunFam Ethylene-responsive transcription factor 2 105 165 - -
Prci12g0976 201 CDD AP2 106 164 IPR001471 GO:0003700|GO:0006355
Prci12g0976 201 SUPERFAMILY DNA-binding domain 106 165 IPR016177 GO:0003677
Prci12g0976 201 PANTHER DNA-BINDING DOMAIN 93 177 IPR044808 GO:0003700|GO:0009873
Prci12g0976 201 Gene3D AP2/ERF domain 105 166 IPR036955 GO:0003700|GO:0006355
Prci12g0976 201 ProSiteProfiles AP2/ERF domain profile. 106 164 IPR001471 GO:0003700|GO:0006355
Prci12g0976 201 SMART rav1_2 106 170 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0976 Prci-Chr12 12616353 12617248 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0976 106 181 AP2-EREBP Transcription Factor Family AT2G44840 72.368 1.96e-35 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci12g0976 AP2 8.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0976 K09286 - pcin:129297492 232.261