Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0975 ATGATTAAGCATTTCAGCGAATCATACATGTCCGGATTCAATTATCTCTCTTATCCTCAACATTCTTCCACATTAGCAGCAATCAGGCAGCACCTTCTCGGCAACGAAATGACCGACCAGCTGCCTCCATCTTCTCCAGCAACACTTTCCGACGACATCTCATTGCACGGCCAGAGCTCAATGTATGACAGTCATTGCATCAGCGAACTAGTAGTTCCTGATGTTTCCACCATTAATAACAATATCAGTGCAGATGCTGCAGTGGCGCTTGAGGGTAACGCACCTCCAGTTGAGCGGTGCTACCGGGGTGTTAGGAGGCGGCCTTGGGGGAAATACGCAGCAGAGATCAGAGATCCGGCTAAAAACGGCGCTAGGGTTTGGCTCGGAACTTTTGATACAGCTGAGGATGCAGCTATTGCTTATGACAGAGCAGCTTATGAGATGCGTGGAGCTAAAGCCAAGCTTAATTTTCCTCTCCTTGTGGGCTCCAACGTGTGGGATTTCGGTTCGACCGAGCCGGAAGCGGGGCATGGCCGGCGGCGGTGA 546 0.511 MIKHFSESYMSGFNYLSYPQHSSTLAAIRQHLLGNEMTDQLPPSSPATLSDDISLHGQSSMYDSHCISELVVPDVSTINNNISADAAVALEGNAPPVERCYRGVRRRPWGKYAAEIRDPAKNGARVWLGTFDTAEDAAIAYDRAAYEMRGAKAKLNFPLLVGSNVWDFGSTEPEAGHGRRR 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0975 181 CDD AP2 101 158 IPR001471 GO:0003700|GO:0006355
Prci12g0975 181 FunFam Ethylene-responsive transcription factor 2 99 159 - -
Prci12g0975 181 SMART rav1_2 100 164 IPR001471 GO:0003700|GO:0006355
Prci12g0975 181 SUPERFAMILY DNA-binding domain 100 159 IPR016177 GO:0003677
Prci12g0975 181 PANTHER DNA-BINDING DOMAIN 83 167 IPR044808 GO:0003700|GO:0009873
Prci12g0975 181 Pfam AP2 domain 100 150 IPR001471 GO:0003700|GO:0006355
Prci12g0975 181 PRINTS Ethylene responsive element binding protein signature 101 112 IPR001471 GO:0003700|GO:0006355
Prci12g0975 181 PRINTS Ethylene responsive element binding protein signature 124 140 IPR001471 GO:0003700|GO:0006355
Prci12g0975 181 ProSiteProfiles AP2/ERF domain profile. 100 158 IPR001471 GO:0003700|GO:0006355
Prci12g0975 181 Gene3D AP2/ERF domain 100 160 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0975 Prci-Chr12 12598873 12599485 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0975 101 181 AP2-EREBP Transcription Factor Family AT2G44840 69.136 3.19e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci12g0975 AP2 5.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0975 K09286 - pcin:129297492 174.866