Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0932 ATGAATTTCTCCTTTGTGTTTGGTGTGATCTTCTTTCTCTTAACCCTAGTTTTAGCCTGTGATCGCCTTCGAAGGTACTGGTCTTGTTCAAATCCTCTGGCCGTCGGGGAGGAAAGCAACTCCGGTGGCGTTGTCGACGTCACTGATCATGAAAGGACTGTATGTAGAAACTCAAAGCCGCTTTTTTACTCAGAGGCGAAAAAGATCGGTTTCTTCAAACCTTTTTCTTCTGCTTCTTCTTCTTCATGTTGTTCAATCTGCTTCATGGATTATAAAGAAACTGATAAGTTGAGATTGCTTCCTGATTGTGGCCATCTTTATCACCTTCACTGCGTTGATTCATGGCTCAAGTTAAACCCTACTTGTCCCTTGTGTCGAACTTCTTCTTCTGTAGTTTCCACTTCTTCTGTAGTTTCCACAAGAGACACAGTGATCGTCAGTGTTGCTTAG 450 0.4267 MNFSFVFGVIFFLLTLVLACDRLRRYWSCSNPLAVGEESNSGGVVDVTDHERTVCRNSKPLFYSEAKKIGFFKPFSSASSSSCCSICFMDYKETDKLRLLPDCGHLYHLHCVDSWLKLNPTCPLCRTSSSVVSTSSVVSTRDTVIVSVA 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0932 149 ProSiteProfiles Zinc finger RING-type profile. 84 126 IPR001841 -
Prci12g0932 149 SUPERFAMILY RING/U-box 83 131 - -
Prci12g0932 149 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 132 IPR013083 -
Prci12g0932 149 Pfam Ring finger domain 84 126 IPR001841 -
Prci12g0932 149 SMART ring_2 84 125 IPR001841 -
Prci12g0932 149 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 132 IPR045899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0932 Prci-Chr12 12002838 12003287 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0932 44 128 C3H Transcription Factor Family AT5G06490 48.235 2.29e-22 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0932 - - pcin:129289096 271.937