Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0927 ATGAGATTCTCTTTCGTGTTTGGTGTGATCTTCTTTCTCTTAACCCTACTTTTAGCTTGTGATCGCCTTCGAAGGTACTGGTCTTGTTCAAATTCTCGGGCCGTCGGAGAAGAAAGCAGCTCCGATGGCGTCGTCGACGTCACTGATCATGAAAGCAGTTTACAAAGAAACTCCAAGCCGCTTTTTTACTCAGAGGCGAAAAAGATCAGTTTCTTCAATCCTTTTTCTTCTGCTTCTTCTTCTTGTTCTTCATGTTGTTCAATCTGCTTCATGGATTATAAAGAAACTGATAAGTTGAGATTGCTTCCTGATTGTGGCCATCTTTATCACCTTCACTGCGTTGATTCATGGCTCAAGTTAAACCCTACTTGTCCCTTGTGTCGAACTTCTTCTTCTGTAGTTTCTACGCGGGACACAGCGATCATCAGTGTTGCTTAG 438 0.4269 MRFSFVFGVIFFLLTLLLACDRLRRYWSCSNSRAVGEESSSDGVVDVTDHESSLQRNSKPLFYSEAKKISFFNPFSSASSSCSSCCSICFMDYKETDKLRLLPDCGHLYHLHCVDSWLKLNPTCPLCRTSSSVVSTRDTAIISVA 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0927 145 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 132 IPR045899 -
Prci12g0927 145 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 134 IPR013083 -
Prci12g0927 145 SMART ring_2 86 127 IPR001841 -
Prci12g0927 145 SUPERFAMILY RING/U-box 85 133 - -
Prci12g0927 145 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Prci12g0927 145 ProSiteProfiles Zinc finger RING-type profile. 86 128 IPR001841 -
Prci12g0927 145 Pfam Ring finger domain 86 128 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0927 Prci-Chr12 11747612 11748336 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0927 37 130 C3H Transcription Factor Family AT5G06490 47.368 3.18e-22 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0927 - - pcin:129289096 206.838