Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0858 ATGAATGGGATTTCTGTTCCTGCTCGCACAAGCTCAGCTCCTCCAAATTTGGATGAGCAGAAAAGAGATCAGGTTCGTCATGATTCTTTTAGACCTGTGCCTTCAGTGCCAACACCTCCAAAGCAGGTACCACCACCGAATAATGGTGGTGTTATGGACCAATCTAATGCTGTAGAGGCTCCTTCAGTGAACAAGGCGAAAAAGGAGGAGCACGTGTCAGCTTTGCCCCCATCAAGCCAGGTGCAAAAGCCATCTGTTGCCATGACTGGGATTTCAATGGCGATGCCATATCATCATCAATCACAGGCACCTGTACAGTTTGGTGTTCCTAATCCACAGATTCAATCTCAGGGATTGACGGCAGCATCTCTTCAGATGCCTATATCAATGCATTTACCAATGGGAAATGTTGCACAAGTACAACAGCAAGTTTTTGTTTCAGGACTTCAACATCCTATTCATGCTCAGGGAATTATGCATCAGGGACAAAACTTAAGTTTCACTTCTCAAATGAGTCCTCAGTTGCCCCATCAGTTAGGTAACACAGGTATTAACATGAACCCACAGTATTCCCAGCAGCAAGGGGGGAAATTTGCTGGTCCTCGCAAAACTACCACTGTCAGGATTACTCATCCTGAGACGCATGAAGAGCTGAGGTTTGACGTTGACAAAAAGGCAGATTCACATTCAGATGTTACCTCATCAAGTGCTAGGTCTTATCCTAATATACTTTCTCAGTCTCAACCTGTTCAATCGTTTACCGCTTCCCTCAACTATTACCACCCATCTAGCACATACAGTGGCAGCTCTCTTTTTATCCCACCTTCAAGTTCTGTTCCTTTATCAAGTAGCCACGTAACTCCTAATTCTCAGCAGCCAAGATTTAACTATCCAGTGAACCAGGCCCCCCAAAATGCAGGTTTTAACAATCAAATATCTCTTAGTTCCTTGCCTGTTAGTAAGACTGGCACTATTGTTCCTGGCCATGGTGAAATGCCAAATCTGGAACATCCTCGTGATGTCCCTAAAGTGATTTCATCAACTACATTTGGGCTCACTCATGCTAGCATCAAAACCAGTGGTGGCTCTGGTGTTAAAACGGGTGAATTTCCTAGCTCTTCGAGGGCATCTATTGATGCTGGCTCCACTGTGTCTCAGAAAGGGTCTGATAATTATTCTGAGACCTCTTCACAGCATTCAAAGTCATCCAGTGATTCTTTTGTTCCAGGGTCATTGCCAAAACAACCTGCTGCTGGATCTGCCGAGAAGCTTGCATCCACTCCTTTGATGCCTTCTTCAGCTTCTGTGAGTGAGAATTCTGCCTCAGTTGTGTCCAACAATGAAGGCAGAAGGAAGGAATCTCTTAGTAGGTCAAACTCTATGACTGATAATCACAAGAAAACAGGGAAGAGAGGAGAATCACTGCATCAGGTGCCTGTAAAATCTCTGATGGTGGTTAATGTACCTTCTCAAGTTGTTGATAGCATTATGCCGGATAGTGAAGTTTCTGATACTGTAGAAAACAAAAAGCCTTTTGCAGAAATAACCAGTGAAGATAGCTCTAGCACACCAGAGGCATTGTCAGTTACAGTTAACAGTGATAATGTTCCTGATGCCAATGAAATGAACATTGACCCTTCTGCTGAAGGTTTTGTTTGCATCTCAGCTGAAGGAGTTGGTGCTTTAGGTGTTGATAGTTTGAAGAACCACGAACATGATAAGTTAGAGGAATCATCACAACAGGATGAACTTTCAAAGACGCAGATTCTTGAAGGGGGTAATAAAAATGAAAAATCTTCTGATGTATTTAAACAAAAAAGTGATGACGATGGGATGAAGTTTAAAGAAACAGAACAGGATGCAGCTCAGGAATCACAAGATGTACCACAAAGACTGGAATGGCAGGATGAATCTACAAATTGTAGCTCAGAATGTGACAGAAAGGGTGATAATTTAGGCATGTCCACCTCAAATAATTTGGATTCTAGAGATATCTATTTAAATAGAAATGATAGTACGGTTAGTAATGAATCTATTTGTGCTAATTCTGCCACATCTGATGAGAATTCTGGTGATCTCCCAGAAGCAACTTCAAAACATAGCAAGGATTGTTCAGAGAATGCAGACAGTGGCTCCGTTTCCCTTCCAACATCAGTTAACAAGGATAGACCTATTTCAGAGCCAAATAAGCTGAAAACTACAACCAAAGGCAAGAAGAAAAGAAAGGAGATTCTTCAGAAAGCAGATGCTGCTGGGTCAACTTCTGATCTCTATAATGCATACAAGAGAACTGAGGAAAAGAAAGAAGTTGTAACTTCAGAGAGCAAAGAAAGCATGTTACCAGGAAGTTTAAAGCAGTTGCCTAATGAGGCTGCTCAATCAGATGCTACAGCGACTGAGAAAGATGAACATGATGAAGCTGAGCCTGATGACTGGGAAGATGCTGCTGACATGTCTTCTCCAAAATTGGAAGTTGCAGATAAAACTCAACTGATCAGTGATGGAAGTGAACTTATGGAGAAAAAATACTCTAGAGATTTCCTTTTAAAATTTGAAGAGCAATGCATTGATGTTCCTGATGGTTTTGAAATTCCAGCAGACGTTGCTGAGGTTTTGATGAATTCTAATATTACTGGTTCTCGTGTTGAACGTGATTCACATCTTAGTCCAGGAAGAATTATAGATAGACCTGGTGGGATGTCTCGAGTGGATAGACGTGGGTCTGGGAAGTTTGAAGAAGAGCGGTGGAGTAAAGTCCCTGGACCATTTAATTCAGGACATGACATTCGTATGGATGGATTTGGAGGTAATGCAGGTTTTCGACCTGGTCAAGGAGGCAATTTTGGTGTTTTGAGGAACCCACGTGCTCAGATGCCTCTGCAATATGCTGGCGGGATCCTTTCTGGACCAATGCAATCCTTGGGAAATCAGGGAGTTATGCAGAGAAATAGCCCTGATGGTGAGAGGTGGCACCGAGCAACTAACTACCAGCAGAGGGGTTTAATTCCTTCTCCTCAAACCCCACTGCAGATGATGCATAAAGCTGAGAAAAAGTATGAGGTGGGTAAGGTGACAGATGAGGAACAAGCAAAGCAAAGACAGTTGAAAGCCATTTTGAACAAGTTAACTCCTCAGAATTTTGAGAAACTTTTTGAGCAGGTAAAAGCAGTTAATATTGACAATGCTGGCACTCTTACTGGTGTAATCTCTCAAATATTTGAGAAAGCTCTAATGGAGCCTACCTTTTGTGAAATGTATGCCAATTTCTGCTTACATCTAGCTGCTGAGTTGCCTGATTTCAGTGAAGACAATGAAAAGATAACTTTTAAGAGATTATTGTTAAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAGGCTAATAAGGATGATGAGGGCGAGGTGAAGCAATCTAATGAAGAGAGGGAAGAGAAACGAATTAAGGCGAGAAGACGCATGTTAGGTAATATACGGTTGATTGGAGAGTTATATAAGAAAAAAATGTTGACAGAGAGGATAATGCATGCGTGCATCACGAAGTTACTGGGATCGTATAAGGACCCTGACGAAGAAGATATAGAAGCTTTGTGCAAGCTGATGAGTACTATAGGGGCGATAATTGATCATCCCAAAGCCAAGGAACACATTGATGCTTATTTTGAAAGGATGAAATTGTTATCAAACAACATGAATTTATCTTCTCGAGTGAGATTCATGTTGAAGGATGCTATTGATCTTAGAAAGAACAAATGGCAACAGAAGCGGAAAATTGAAGGTCCAAAGAAGATTGAGGAGGTGCACAGAGATGCTGCCCAAGAGAGGCAGGCCCAAACTGGTAGGCTAGGTCGTGGTCCAGGTAATGTACCGTCATCTAGAAGGATGCCTGTGGATTTTAGTCCAAGAGGGCCGTCATCTATGTTTTCTCCCCCCAACACCCCTATGGGGCTGCGTGGGCCTTCTGCACAGGTTCGCAGTGGTGGCTCTCAGGATGTTCGTCGTGATGATAGATTATCACATGAGAGTAGAAATTTGTCAGTTCATTTGCCTCAAAGACCTTTAGGTGGTGATTCTATAACTTTGGGTCCACAAGGTGGTCTTGCAAGAGGAATGTCCTTTAGAGGGCCAGCTGGAATTCCAAGTTCTTCTGTTCCTGATGCACTCCCAGTTGCTGCTGATTCTCGAAGAATGATTTCTGGCCTTAATGGTTATGCTAATTCATCAGACCGTGCTCAGTACAGCACTAGAGAAGATCTCATGCCAAGATATGCAACAGACAGATTTTCTGGTCCAACTGCTCATGATCAATCAGCTGCTCAGGAGCGTATTATTAATTATGGTAATAAGGAGCTGAGAAATGCAGATTGGAATCTTGAGAGACCTGTTGCAACTTTAACTGCTGGTGTGCAAGGATCTGCAGTCCCAGAAGAACGACTGCGGGACATGTCCATGGCAGCAATTAAAGAATACTACAGTGCTAGAGATGTAAAAGAAGTTGCGCTATGTGTCAAAGATCTAAACTCTCCAAGCTATCATCCCTCGATGATTTCTCTATGGGTCACAGACTCGTTTGAGAGAAAGGACACAGAAAGAGATCATTTGGCCAAATTACTAGTGAACCTAACAAAGTCTCAGGATGGCACCTTGAGTCAGTCTCAACTTATCCTAGGGTTTGAATCTGTTTTAAGTGGTCTGGAAGATGCTGTTAATGATGCCCCCAGAGCACCTGAATTTCTAGGCCGCATTTTTGCCAGAGTTGTGACGGAAAATGTCATCTCTTTGAAAGAGATCGGCTGGCTATTACATGAAGGTGGAGAGGAGCCAGGCCAACTTTTAGAAAATGGACTTGCAGCACATGTTCTTGGAAGCACCTTGGAGGCAATAAAAATGGAGAAGGGGGATGCTGTTCTGAGTGAGTTACGCTCAAACTCTAACTTGAGGCTGGAGACTTTCCGGTCACCTAATGCCATTATATCAAGAAAGTTAGAAAATTTTATTTAG 5010 0.4265 MNGISVPARTSSAPPNLDEQKRDQVRHDSFRPVPSVPTPPKQVPPPNNGGVMDQSNAVEAPSVNKAKKEEHVSALPPSSQVQKPSVAMTGISMAMPYHHQSQAPVQFGVPNPQIQSQGLTAASLQMPISMHLPMGNVAQVQQQVFVSGLQHPIHAQGIMHQGQNLSFTSQMSPQLPHQLGNTGINMNPQYSQQQGGKFAGPRKTTTVRITHPETHEELRFDVDKKADSHSDVTSSSARSYPNILSQSQPVQSFTASLNYYHPSSTYSGSSLFIPPSSSVPLSSSHVTPNSQQPRFNYPVNQAPQNAGFNNQISLSSLPVSKTGTIVPGHGEMPNLEHPRDVPKVISSTTFGLTHASIKTSGGSGVKTGEFPSSSRASIDAGSTVSQKGSDNYSETSSQHSKSSSDSFVPGSLPKQPAAGSAEKLASTPLMPSSASVSENSASVVSNNEGRRKESLSRSNSMTDNHKKTGKRGESLHQVPVKSLMVVNVPSQVVDSIMPDSEVSDTVENKKPFAEITSEDSSSTPEALSVTVNSDNVPDANEMNIDPSAEGFVCISAEGVGALGVDSLKNHEHDKLEESSQQDELSKTQILEGGNKNEKSSDVFKQKSDDDGMKFKETEQDAAQESQDVPQRLEWQDESTNCSSECDRKGDNLGMSTSNNLDSRDIYLNRNDSTVSNESICANSATSDENSGDLPEATSKHSKDCSENADSGSVSLPTSVNKDRPISEPNKLKTTTKGKKKRKEILQKADAAGSTSDLYNAYKRTEEKKEVVTSESKESMLPGSLKQLPNEAAQSDATATEKDEHDEAEPDDWEDAADMSSPKLEVADKTQLISDGSELMEKKYSRDFLLKFEEQCIDVPDGFEIPADVAEVLMNSNITGSRVERDSHLSPGRIIDRPGGMSRVDRRGSGKFEEERWSKVPGPFNSGHDIRMDGFGGNAGFRPGQGGNFGVLRNPRAQMPLQYAGGILSGPMQSLGNQGVMQRNSPDGERWHRATNYQQRGLIPSPQTPLQMMHKAEKKYEVGKVTDEEQAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNAGTLTGVISQIFEKALMEPTFCEMYANFCLHLAAELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKDDEGEVKQSNEEREEKRIKARRRMLGNIRLIGELYKKKMLTERIMHACITKLLGSYKDPDEEDIEALCKLMSTIGAIIDHPKAKEHIDAYFERMKLLSNNMNLSSRVRFMLKDAIDLRKNKWQQKRKIEGPKKIEEVHRDAAQERQAQTGRLGRGPGNVPSSRRMPVDFSPRGPSSMFSPPNTPMGLRGPSAQVRSGGSQDVRRDDRLSHESRNLSVHLPQRPLGGDSITLGPQGGLARGMSFRGPAGIPSSSVPDALPVAADSRRMISGLNGYANSSDRAQYSTREDLMPRYATDRFSGPTAHDQSAAQERIINYGNKELRNADWNLERPVATLTAGVQGSAVPEERLRDMSMAAIKEYYSARDVKEVALCVKDLNSPSYHPSMISLWVTDSFERKDTERDHLAKLLVNLTKSQDGTLSQSQLILGFESVLSGLEDAVNDAPRAPEFLGRIFARVVTENVISLKEIGWLLHEGGEEPGQLLENGLAAHVLGSTLEAIKMEKGDAVLSELRSNSNLRLETFRSPNAIISRKLENFI 1669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0858 1669 SMART if4_15 1032 1254 IPR003890 GO:0003723|GO:0005515
Prci12g0858 1669 MobiDBLite consensus disorder prediction 898 917 - -
Prci12g0858 1669 MobiDBLite consensus disorder prediction 1 84 - -
Prci12g0858 1669 MobiDBLite consensus disorder prediction 1332 1346 - -
Prci12g0858 1669 SUPERFAMILY ARM repeat 1026 1256 IPR016024 -
Prci12g0858 1669 MobiDBLite consensus disorder prediction 1257 1346 - -
Prci12g0858 1669 MobiDBLite consensus disorder prediction 707 724 - -
Prci12g0858 1669 MobiDBLite consensus disorder prediction 597 622 - -
Prci12g0858 1669 MobiDBLite consensus disorder prediction 498 544 - -
Prci12g0858 1669 Coils Coil 1114 1152 - -
Prci12g0858 1669 MobiDBLite consensus disorder prediction 882 924 - -
Prci12g0858 1669 Pfam MA3 domain 1486 1595 IPR003891 -
Prci12g0858 1669 Gene3D - 1475 1669 - -
Prci12g0858 1669 MobiDBLite consensus disorder prediction 765 822 - -
Prci12g0858 1669 MobiDBLite consensus disorder prediction 1 18 - -
Prci12g0858 1669 SMART ma3_7 1482 1596 IPR003891 -
Prci12g0858 1669 Pfam MIF4G domain 1032 1254 IPR003890 GO:0003723|GO:0005515
Prci12g0858 1669 MobiDBLite consensus disorder prediction 515 540 - -
Prci12g0858 1669 MobiDBLite consensus disorder prediction 1123 1150 - -
Prci12g0858 1669 MobiDBLite consensus disorder prediction 1257 1278 - -
Prci12g0858 1669 FunFam Eukaryotic translation initiation factor 4G 1032 1267 - -
Prci12g0858 1669 MobiDBLite consensus disorder prediction 426 449 - -
Prci12g0858 1669 MobiDBLite consensus disorder prediction 572 748 - -
Prci12g0858 1669 ProSiteProfiles MI domain profile. 1481 1605 IPR003891 -
Prci12g0858 1669 FunFam Eukaryotic translation initiation factor 4G 1475 1668 - -
Prci12g0858 1669 MobiDBLite consensus disorder prediction 355 410 - -
Prci12g0858 1669 MobiDBLite consensus disorder prediction 355 476 - -
Prci12g0858 1669 MobiDBLite consensus disorder prediction 450 474 - -
Prci12g0858 1669 SUPERFAMILY ARM repeat 1475 1660 IPR016024 -
Prci12g0858 1669 Gene3D - 1032 1267 - -
Prci12g0858 1669 MobiDBLite consensus disorder prediction 623 692 - -
Prci12g0858 1669 MobiDBLite consensus disorder prediction 776 795 - -
Prci12g0858 1669 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 185 1668 IPR045208 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0858 Prci-Chr12 9527824 9536060 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0858 4 1668 Eukaryotic Initiation Factors Gene Family AT3G60240 44.974 0.0 1177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0858 K03260 - gmx:100796636 1942.93