Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0857 ATGTCCTTCAATCAATCAAGGTCCGATAAGAGCGACAATCATCACCGTAAATCCGGGCGATCAGGGAGCTTCAATCAGCAGCGAGGTTCCTCAGGCACGTACGTCAAGGGTGTTGGCGGCGGGCCCGCGCCTTCTCCCGTGATCACTTCGGGTTCCTCACCGCCCTCTGATCGGAGTTTTAAGAGGTCTGATTATCCACATGGTGGGCAATCTAGGGTAAACCCTCCCCCTGTGAATTCAGCCGAGTCTAATAGTGCTTCTACAGGCGGGACGATACCAAATGGTGCCCATACACAGCAATCACCGGAAGCATCTGATGCACCAGTTACAAATGCAGCTGCCAAGTTATCTGAACTGTCATCTGTTCAGAAGAGCACCAGAGTTGTTCCGAAAGCTCCAACTCCTCGACCTGCCACCGTGAGTTCTGATACAGCAGCTCCTACAACCCCTGCCAAGGCCCCTGGAGATTCATCCAAGCCGTTTGCTGTCCAATTTGGGTCCATTAGTCCCGGTTTCATGAATGGGATTTCTGTTCCTGCTCGCACAAGCTCAGCTCCTCCAAATTTGGATGAGCAGAAAAGAGATCAGGTTCGTCATGATTCTTTTAGACCTGTGCCTTCAGTGCCAACACCTCCAAAGCAGGTACCACCACCGAATAATGGTGGTGTTATGGACCAATCTAATGCTGTAGAGGCTCCTTCAGTGAACAAGGCGAAAAAGGAGGAGCACGTGTCAGCTTTGCCCCCATCAAGCCAGGTGCAAAAGCCATCTGTTGCCATGACTGGGATTTCAATGGCGATGCCATATCATCATCAATCACAGGCACCTGTACAGTTTGGTGTTCCTAATCCACAGATTCAATCTCAGGGATTGACGGCAGCATCTCTTCAGATGCCTATATCAATGCATTTACCAATGGGAAATGTTGCACAAGTACAACAGCAAGTTTTTGTTTCAGGACTTCAACATCCTATTCATGCTCAGGGAATTATGCATCAGGGACAAAACTTAAGTTTCACTTCTCAAATGAGTCCTCAGTTGCCCCATCAGTTAGGTAACACAGGTATTAACATGAACCCACAGTATTCCCAGCAGCAAGGGGGGAAATTTGCTGGTCCTCGCAAAACTACCACTGTCAGGATTACTCATCCTGAGACGCATGAAGAGCTGAGGTTTGACGTTGACAAAAAGGCAGATTCACATTCAGATGTTACCTCATCAAGTGCTAGGTCTTATCCTAATATACTTTCTCAGTCTCAACCTGTTCAATCGTTTACCGCTTCCCTCAACTATTACCACCCATCTAGCACATACAGTGGCAGCTCTCTTTTTATCCCACCTTCAAGTTCTGTTCCTTTATCAAGTAGCCACGTAACTCCTAATTCTCAGCAGCCAAGATTTAACTATCCAGTGAACCAGGCCCCCCAAAATGCAGGTTTTAACAATCAAATATCTCTTAGTTCCTTGCCTGTTAGTAAGACTGGCACTATTGTTCCTGGCCATGGTGAAATGCCAAATCTGGAACATCCTCGTGATGTCCCTAAAGTGATTTCATCAACTACATTTGGGCTCACTCATGCTAGCATCAAAACCAGTGGTGGCTCTGGTGTTAAAACGGGGTCATTGCCAAAACAACCTGCTGCTGGATCTGCCGAGAAGCTTGCATCCACTCCTTTGATGCCTTCTTCAGCTTCTGTGAGTGAGAATTCTGCCTCAGTTGTGTCCAACAATGAAGGCAGAAGGAAGGAATCTCTTAGTAGGTCAAACTCTATGACTGATAATCACAAGAAAACAGGGAAGAGAGGAGAATCACTGCATCAGGTGCCTGTAAAATCTCTGATGGTGGTTAATGTACCTTCTCAAGTTGTTGATAGCATTATGCCGGATAGTGAAGTTTCTGATACTGTAGAAAACAAAAAGCCTTTTGCAGAAATAACCAGTGAAGATAGCTCTAGCACACCAGAGGCATTGTCAGTTACAGTTAACAGTGATAATGTTCCTGATGCCAATGAAATGAACATTGACCCTTCTGCTGAAGGTTTTGTTTGCATCTCAGCTGAAGGAGTTGGTGCTTTAGGTGTTGATAGTTTGAAGAACCACGAACATGATAAGTTAGAGGAATCATCACAACAGGATGAACTTTCAAAGACGCAGATTCTTGAAGGGGGTAATAAAAATGAAAAATCTTCTGATGTATTTAAACAAAAAAGTGATGACGATGGGATGAAGTTTAAAGAAACAGAACAGGATGCAGCTCAGGAATCACAAGATGTACCACAAAGACTGGAATGGCAGGATGAATCTACAAATTGTAGCTCAGAATGTGACAGAAAGGGTGATAATTTAGGCATGTCCACCTCAAATAATTTGGATTCTAGAGATATCTATTTAAATAGAAATGATAGTACGGTTAGTAATGAATCTATTTGTGCTAATTCTGCCACATCTGATGAGAATTCTGGTGATCTCCCAGAAGCAACTTCAAAACATAGCAAGGATTGTTCAGAGAATGCAGACAGTGGCTCCGTTTCCCTTCCAACATCAGTTAACAAGGATAGACCTATTTCAGAGCCAAATAAGCTGAAAACTACAACCAAAGGCAAGAAGAAAAGAAAGGAGATTCTTCAGAAAGCAGATGCTGCTGGGTCAACTTCTGATCTCTATAATGCATACAAGAGAACTGAGGAAAAGAAAGAAGTTGTAACTTCAGAGAGCAAAGAAAGCATGTTACCAGGAAGTTTAAAGCAGTTGCCTAATGAGGCTGCTCAATCAGATGCTACAGCGACTGAGAAAGATGAACATGATGAAGCTGAGCCTGATGACTGGGAAGATGCTGCTGACATGTCTTCTCCAAAATTGGAAGTTGCAGATAAAACTCAACTGATCAGTGATGGAAGTGAACTTATGGAGAAAAAATACTCTAGAGATTTCCTTTTAAAATTTGAAGAGCAATGCATTGATGTTCCTGATGGTTTTGAAATTCCAGCAGACGTTGCTGAGGTTTTGATGAATTCTAATATTACTGGTTCTCGTGTTGAACGTGATTCACATCTTAGTCCAGGAAGAATTATAGATAGACCTGGTGGGATGTCTCGAGTGGATAGACGTGGGTCTGGGAAGTTTGAAGAAGAGCGGTGGAGTAAAGTCCCTGGACCATTTAATTCAGGACATGACATTCGTATGGATGGATTTGGAGGTAATGCAGGTTTTCGACCTGGTCAAGGAGGCAATTTTGGTGTTTTGAGGAACCCACGTGCTCAGATGCCTCTGCAATATGCTGGCGGGATCCTTTCTGGACCAATGCAATCCTTGGGAAATCAGGGAGTTATGCAGAGAAATAGCCCTGATGGTGAGAGGTGGCACCGAGCAACTAACTACCAGCAGAGGGGTTTAATTCCTTCTCCTCAAACCCCACTGCAGATGATGCATAAAGCTGAGAAAAAGTATGAGGTGGGTAAGGTGACAGATGAGGAACAAGCAAAGCAAAGACAGTTGAAAGCCATTTTGAACAAGTTAACTCCTCAGAATTTTGAGAAACTTTTTGAGCAGGTAAAAGCAGTTAATATTGACAATGCTGGCACTCTTACTGGTGTAATCTCTCAAATATTTGAGAAAGCTCTAATGGAGCCTACCTTTTGTGAAATGTATGCCAATTTCTGCTTACATCTAGCTGCTGAGTTGCCTGATTTCAGTGAAGACAATGAAAAGATAACTTTTAAGAGATTATTGTTAAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAGGCTAATAAGGATGATGAGGGCGAGGTGAAGCAATCTAATGAAGAGAGGGAAGAGAAACGAATTAAGGCGAGAAGACGCATGTTAGGTAATATACGGTTGATTGGAGAGTTATATAAGAAAAAAATGTTGACAGAGAGGATAATGCATGCGTGCATCACGAAGTTACTGGGATCGTATAAGGACCCTGACGAAGAAGATATAGAAGCTTTGTGCAAGCTGATGAGTACTATAGGGGCGATAATTGATCATCCCAAAGCCAAGGAACACATTGATGCTTATTTTGAAAGGATGAAATTGTTATCAAACAACATGAATTTATCTTCTCGAGTGAGATTCATGTTGAAGGATGCTATTGATCTTAGAAAGAACAAATGGCAACAGAAGCGGAAAATTGAAGGTCCAAAGAAGATTGAGGAGGTGCACAGAGATGCTGCCCAAGAGAGGCAGGCCCAAACTGGTAGGCTAGGTCGTGGTCCAGGTAATGTACCGTCATCTAGAAGGATGCCTGTGGATTTTAGTCCAAGAGGGCCGTCATCTATGTTTTCTCCCCCCAACACCCCTATGGGGCTGCGTGGGCCTTCTGCACAGGTTCGCAGTGGTGGCTCTCAGGATGTTCGTCGTGATGATAGATTATCACATGAGAGTAGAAATTTGTCAGTTCATTTGCCTCAAAGACCTTTAGGTGGTGATTCTATAACTTTGGGTCCACAAGGTGGTCTTGCAAGAGGAATGTCCTTTAGAGGGCCAGCTGGAATTCCAAGTTCTTCTGTTCCTGATGCACTCCCAGTTGCTGCTGATTCTCGAAGAATGATTTCTGGCCTTAATGGTTATGCTAATTCATCAGACCGTGCTCAGTACAGCACTAGAGAAGATCTCATGCCAAGATATGCAACAGACAGATTTTCTGGTCCAACTGCTCATGATCAATCAGCTGCTCAGGAGCGTATTATTAATTATGGTAATAAGGAGCTGAGAAATGCAGATTGGAATCTTGAGAGACCTGTTGCAACTTTAACTGCTGGTGTGCAAGGATCTGCAGTCCCAGAAGAACGACTGCGGGACATGTCCATGGCAGCAATTAAAGAATACTACAGTGCTAGAGATGTAAAAGAAGTTGCGCTATGTGTCAAAGATCTAAACTCTCCAAGCTATCATCCCTCGATGATTTCTCTATGGGTCACAGACTCGTTTGAGAGAAAGGACACAGAAAGAGATCATTTGGCCAAATTACTAGTGAACCTAACAAAGTCTCAGGATGGCACCTTGAGTCAGTCTCAACTTATCCTAGGGTTTGAATCTGTTTTAAGTGGTCTGGAAGATGCTGTTAATGATGCCCCCAGAGCACCTGAATTTCTAGGCCGCATTTTTGCCAGAGTTGTGACGGAAAATGTCATCTCTTTGAAAGAGATCGGCTGGCTATTACATGAAGGTGGAGAGGAGCCAGGCCAACTTTTAGAAAATGGACTTGCAGCACATGTTCTTGGAAGCACCTTGGAGGCAATAAAAATGGAGAAGGGGGATGCTGTTCTGAGTGAGTTACGCTCAAACTCTAACTTGAGGCTGGAGACTTTCCGGTCACCTAATGCCATTATATCAAGAAAGTTAGAAAATTTTATTTAG 5400 0.4363 MSFNQSRSDKSDNHHRKSGRSGSFNQQRGSSGTYVKGVGGGPAPSPVITSGSSPPSDRSFKRSDYPHGGQSRVNPPPVNSAESNSASTGGTIPNGAHTQQSPEASDAPVTNAAAKLSELSSVQKSTRVVPKAPTPRPATVSSDTAAPTTPAKAPGDSSKPFAVQFGSISPGFMNGISVPARTSSAPPNLDEQKRDQVRHDSFRPVPSVPTPPKQVPPPNNGGVMDQSNAVEAPSVNKAKKEEHVSALPPSSQVQKPSVAMTGISMAMPYHHQSQAPVQFGVPNPQIQSQGLTAASLQMPISMHLPMGNVAQVQQQVFVSGLQHPIHAQGIMHQGQNLSFTSQMSPQLPHQLGNTGINMNPQYSQQQGGKFAGPRKTTTVRITHPETHEELRFDVDKKADSHSDVTSSSARSYPNILSQSQPVQSFTASLNYYHPSSTYSGSSLFIPPSSSVPLSSSHVTPNSQQPRFNYPVNQAPQNAGFNNQISLSSLPVSKTGTIVPGHGEMPNLEHPRDVPKVISSTTFGLTHASIKTSGGSGVKTGSLPKQPAAGSAEKLASTPLMPSSASVSENSASVVSNNEGRRKESLSRSNSMTDNHKKTGKRGESLHQVPVKSLMVVNVPSQVVDSIMPDSEVSDTVENKKPFAEITSEDSSSTPEALSVTVNSDNVPDANEMNIDPSAEGFVCISAEGVGALGVDSLKNHEHDKLEESSQQDELSKTQILEGGNKNEKSSDVFKQKSDDDGMKFKETEQDAAQESQDVPQRLEWQDESTNCSSECDRKGDNLGMSTSNNLDSRDIYLNRNDSTVSNESICANSATSDENSGDLPEATSKHSKDCSENADSGSVSLPTSVNKDRPISEPNKLKTTTKGKKKRKEILQKADAAGSTSDLYNAYKRTEEKKEVVTSESKESMLPGSLKQLPNEAAQSDATATEKDEHDEAEPDDWEDAADMSSPKLEVADKTQLISDGSELMEKKYSRDFLLKFEEQCIDVPDGFEIPADVAEVLMNSNITGSRVERDSHLSPGRIIDRPGGMSRVDRRGSGKFEEERWSKVPGPFNSGHDIRMDGFGGNAGFRPGQGGNFGVLRNPRAQMPLQYAGGILSGPMQSLGNQGVMQRNSPDGERWHRATNYQQRGLIPSPQTPLQMMHKAEKKYEVGKVTDEEQAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNAGTLTGVISQIFEKALMEPTFCEMYANFCLHLAAELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKDDEGEVKQSNEEREEKRIKARRRMLGNIRLIGELYKKKMLTERIMHACITKLLGSYKDPDEEDIEALCKLMSTIGAIIDHPKAKEHIDAYFERMKLLSNNMNLSSRVRFMLKDAIDLRKNKWQQKRKIEGPKKIEEVHRDAAQERQAQTGRLGRGPGNVPSSRRMPVDFSPRGPSSMFSPPNTPMGLRGPSAQVRSGGSQDVRRDDRLSHESRNLSVHLPQRPLGGDSITLGPQGGLARGMSFRGPAGIPSSSVPDALPVAADSRRMISGLNGYANSSDRAQYSTREDLMPRYATDRFSGPTAHDQSAAQERIINYGNKELRNADWNLERPVATLTAGVQGSAVPEERLRDMSMAAIKEYYSARDVKEVALCVKDLNSPSYHPSMISLWVTDSFERKDTERDHLAKLLVNLTKSQDGTLSQSQLILGFESVLSGLEDAVNDAPRAPEFLGRIFARVVTENVISLKEIGWLLHEGGEEPGQLLENGLAAHVLGSTLEAIKMEKGDAVLSELRSNSNLRLETFRSPNAIISRKLENFI 1799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0857 1799 MobiDBLite consensus disorder prediction 727 752 - -
Prci12g0857 1799 MobiDBLite consensus disorder prediction 1253 1280 - -
Prci12g0857 1799 MobiDBLite consensus disorder prediction 906 925 - -
Prci12g0857 1799 Coils Coil 1244 1282 - -
Prci12g0857 1799 ProSiteProfiles MI domain profile. 1611 1735 IPR003891 -
Prci12g0857 1799 SUPERFAMILY ARM repeat 1605 1790 IPR016024 -
Prci12g0857 1799 MobiDBLite consensus disorder prediction 1387 1408 - -
Prci12g0857 1799 MobiDBLite consensus disorder prediction 1462 1476 - -
Prci12g0857 1799 MobiDBLite consensus disorder prediction 645 670 - -
Prci12g0857 1799 MobiDBLite consensus disorder prediction 642 673 - -
Prci12g0857 1799 MobiDBLite consensus disorder prediction 176 190 - -
Prci12g0857 1799 MobiDBLite consensus disorder prediction 753 822 - -
Prci12g0857 1799 MobiDBLite consensus disorder prediction 1028 1047 - -
Prci12g0857 1799 MobiDBLite consensus disorder prediction 580 603 - -
Prci12g0857 1799 Gene3D - 1605 1799 - -
Prci12g0857 1799 FunFam Eukaryotic translation initiation factor 4G 1605 1798 - -
Prci12g0857 1799 MobiDBLite consensus disorder prediction 837 854 - -
Prci12g0857 1799 Pfam MIF4G domain 1162 1384 IPR003890 GO:0003723|GO:0005515
Prci12g0857 1799 MobiDBLite consensus disorder prediction 556 579 - -
Prci12g0857 1799 SUPERFAMILY ARM repeat 1156 1386 IPR016024 -
Prci12g0857 1799 MobiDBLite consensus disorder prediction 114 128 - -
Prci12g0857 1799 MobiDBLite consensus disorder prediction 1012 1054 - -
Prci12g0857 1799 SMART ma3_7 1612 1726 IPR003891 -
Prci12g0857 1799 MobiDBLite consensus disorder prediction 895 952 - -
Prci12g0857 1799 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 358 1798 IPR045208 GO:0003743
Prci12g0857 1799 FunFam Eukaryotic translation initiation factor 4G 1162 1397 - -
Prci12g0857 1799 Gene3D - 1162 1397 - -
Prci12g0857 1799 MobiDBLite consensus disorder prediction 702 878 - -
Prci12g0857 1799 MobiDBLite consensus disorder prediction 529 603 - -
Prci12g0857 1799 SMART if4_15 1162 1384 IPR003890 GO:0003723|GO:0005515
Prci12g0857 1799 Pfam MA3 domain 1616 1725 IPR003891 -
Prci12g0857 1799 MobiDBLite consensus disorder prediction 73 107 - -
Prci12g0857 1799 MobiDBLite consensus disorder prediction 1387 1476 - -
Prci12g0857 1799 MobiDBLite consensus disorder prediction 1 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0857 Prci-Chr12 9527286 9536060 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0857 774 1798 Eukaryotic Initiation Factors Gene Family AT3G60240 53.796 0.0 994
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0857 K03260 - gmx:100796636 2075.83