Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0855 ATGTCCTTCAATCAATCAAGGTCCGATAAGAGCGACAATCATCACCGTAAATCCGGGCGATCAGGGAGCTTCAATCAGCAGCGAGGTTCCTCAGGCACGTACGTCAAGGGTGTTGGCGGCGGGCCCGCGCCTTCTCCCGTGATCACTTCGGGTTCCTCACCGCCCTCTGATCGGAGGGTAAACCCTCCCCCTGTGAATTCAGCCGAGTCTAATAGTGCTTCTACAGGCGGGACGATACCAAATGGTGCCCATACACAGCAATCACCGGAAGCATCTGATGCACCAGTTACAAATGCAGCTGCCAAGTTATCTGAACTGTCATCTGTTCAGAAGAGCACCAGAGTTGTTCCGAAAGCTCCAACTCCTCGACCTGCCACCGTGAGTTCTGATACAGCAGCTCCTACAACCCCTGCCAAGGCCCCTGGAGATTCATCCAAGCCGTTTGCTGTCCAATTTGGGTCCATTAGTCCCGGTTTCATGAATGGGATTTCTGTTCCTGCTCGCACAAGCTCAGCTCCTCCAAATTTGGATGAGCAGAAAAGAGATCAGGTTCGTCATGATTCTTTTAGACCTGTGCCTTCAGTGCCAACACCTCCAAAGCAGGTACCACCACCGAATAATGGTGGTGTTATGGACCAATCTAATGCTGTAGAGGCTCCTTCAGTGAACAAGGCGAAAAAGGAGGAGCACGTGTCAGCTTTGCCCCCATCAAGCCAGGTGCAAAAGCCATCTGTTGCCATGACTGGGATTTCAATGGCGATGCCATATCATCATCAATCACAGGCACCTGTACAGTTTGGTGTTCCTAATCCACAGATTCAATCTCAGGGATTGACGGCAGCATCTCTTCAGATGCCTATATCAATGCATTTACCAATGGGAAATGTTGCACAAGTACAACAGCAAGTTTTTGTTTCAGGACTTCAACATCCTATTCATGCTCAGGGAATTATGCATCAGGGACAAAACTTAAGTTTCACTTCTCAAATGAGTCCTCAGTTGCCCCATCAGTTAGGTAACACAGGTATTAACATGAACCCACAGTATTCCCAGCAGCAAGGGGGGAAATTTGCTGGTCCTCGCAAAACTACCACTGTCAGGATTACTCATCCTGAGACGCATGAAGAGCTGAGGTTTGACGTTGACAAAAAGGCAGATTCACATTCAGATGTTACCTCATCAAGTGCTAGGTCTTATCCTAATATACTTTCTCAGTCTCAACCTGTTCAATCGTTTACCGCTTCCCTCAACTATTACCACCCATCTAGCACATACAGTGGCAGCTCTCTTTTTATCCCACCTTCAAGTTCTGTTCCTTTATCAAGTAGCCACGTAACTCCTAATTCTCAGCAGCCAAGATTTAACTATCCAGTGAACCAGGCCCCCCAAAATGCAGGTTTTAACAATCAAATATCTCTTAGTTCCTTGCCTGTTAGTAAGACTGGCACTATTGTTCCTGGCCATGGTGAAATGCCAAATCTGGAACATCCTCGTGATGTCCCTAAAGTGATTTCATCAACTACATTTGGGCTCACTCATGCTAGCATCAAAACCAGTGGTGGCTCTGGTGTTAAAACGGGTGAATTTCCTAGCTCTTCGAGGGCATCTATTGATGCTGGCTCCACTGTGTCTCAGAAAGGGTCTGATAATTATTCTGAGACCTCTTCACAGCATTCAAAGTCATCCAGTGATTCTTTTGTTCCAGGGTCATTGCCAAAACAACCTGCTGCTGGATCTGCCGAGAAGCTTGCATCCACTCCTTTGATGCCTTCTTCAGCTTCTGTGAGTGAGAATTCTGCCTCAGTTGTGTCCAACAATGAAGGCAGAAGGAAGGAATCTCTTAGTAGGTCAAACTCTATGACTGATAATCACAAGAAAACAGGGAAGAGAGGAGAATCACTGCATCAGGTGCCTGTAAAATCTCTGATGGTGGTTAATGTACCTTCTCAAGTTGTTGATAGCATTATGCCGGATAGTGAAGTTTCTGATACTGTAGAAAACAAAAAGCCTTTTGCAGAAATAACCAGTGAAGATAGCTCTAGCACACCAGAGGCATTGTCAGTTACAGTTAACAGTGATAATGTTCCTGATGCCAATGAAATGAACATTGACCCTTCTGCTGAAGGTTTTGTTTGCATCTCAGCTGAAGGAGTTGGTGCTTTAGGTGTTGATAGTTTGAAGAACCACGAACATGATAAGTTAGAGGAATCATCACAACAGGATGAACTTTCAAAGACGCAGATTCTTGAAGGGGGTAATAAAAATGAAAAATCTTCTGATGTATTTAAACAAAAAAGTGATGACGATGGGATGAAGTTTAAAGAAACAGAACAGGATGCAGCTCAGGAATCACAAGATGTACCACAAAGACTGGAATGGCAGGATGAATCTACAAATTGTAGCTCAGAATGTGACAGAAAGGGTGATAATTTAGGCATGTCCACCTCAAATAATTTGGATTCTAGAGATATCTATTTAAATAGAAATGATAGTACGGTTAGTAATGAATCTATTTGTGCTAATTCTGCCACATCTGATGAGAATTCTGGTGATCTCCCAGAAGCAACTTCAAAACATAGCAAGGATTGTTCAGAGAATGCAGACAGTGGCTCCGTTTCCCTTCCAACATCAGTTAACAAGGATAGACCTATTTCAGAGCCAAATAAGCTGAAAACTACAACCAAAGGCAAGAAGAAAAGAAAGGAGATTCTTCAGAAAGCAGATGCTGCTGGGTCAACTTCTGATCTCTATAATGCATACAAGAGAACTGAGGAAAAGAAAGAAGTTGTAACTTCAGAGAGCAAAGAAAGCATGTTACCAGGAAGTTTAAAGCAGTTGCCTAATGAGGCTGCTCAATCAGATGCTACAGCGACTGAGAAAGATGAACATGATGAAGCTGAGCCTGATGACTGGGAAGATGCTGCTGACATGTCTTCTCCAAAATTGGAAGTTGCAGATAAAACTCAACTGATCAGTGATGGAAGTGAACTTATGGAGAAAAAATACTCTAGAGATTTCCTTTTAAAATTTGAAGAGCAATGCATTGATGTTCCTGATGGTTTTGAAATTCCAGCAGACGTTGCTGAGGTTTTGATGAATTCTAATATTACTGGTTCTCGTGTTGAACGTGATTCACATCTTAGTCCAGGAAGAATTATAGATAGACCTGGTGGGATGTCTCGAGTGGATAGACGTGGGTCTGGGAAGTTTGAAGAAGAGCGGTGGAGTAAAGTCCCTGGACCATTTAATTCAGGACATGACATTCGTATGGATGGATTTGGAGGTAATGCAGGTTTTCGACCTGGTCAAGGAGGCAATTTTGGTGTTTTGAGGAACCCACGTGCTCAGATGCCTCTGCAATATGCTGGCGGGATCCTTTCTGGACCAATGCAATCCTTGGGAAATCAGGGAGTTATGCAGAGAAATAGCCCTGATGGTGAGAGGTGGCACCGAGCAACTAACTACCAGCAGAGGGGTTTAATTCCTTCTCCTCAAACCCCACTGCAGATGATGCATAAAGCTGAGAAAAAGTATGAGGTGGGTAAGGTGACAGATGAGGAACAAGCAAAGCAAAGACAGTTGAAAGCCATTTTGAACAAGTTAACTCCTCAGAATTTTGAGAAACTTTTTGAGCAGGTAAAAGCAGTTAATATTGACAATGCTGGCACTCTTACTGGTGTAATCTCTCAAATATTTGAGAAAGCTCTAATGGAGCCTACCTTTTGTGAAATGTATGCCAATTTCTGCTTACATCTAGCTGCTGAGTTGCCTGATTTCAGTGAAGACAATGAAAAGATAACTTTTAAGAGATTATTGTTAAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAGGCTAATAAGGATGATGAGGGCGAGGTGAAGCAATCTAATGAAGAGAGGGAAGAGAAACGAATTAAGGCGAGAAGACGCATGTTAGGTAATATACGGTTGATTGGAGAGTTATATAAGAAAAAAATGTTGACAGAGAGGATAATGCATGCGTGCATCACGAAGTTACTGGGATCGTATAAGGACCCTGACGAAGAAGATATAGAAGCTTTGTGCAAGCTGATGAGTACTATAGGGGCGATAATTGATCATCCCAAAGCCAAGGAACACATTGATGCTTATTTTGAAAGGATGAAATTGTTATCAAACAACATGAATTTATCTTCTCGAGTGAGATTCATGTTGAAGGATGCTATTGATCTTAGAAAGAACAAATGGCAACAGAAGCGGAAAATTGAAGGTCCAAAGAAGATTGAGGAGGTGCACAGAGATGCTGCCCAAGAGAGGCAGGCCCAAACTGGTAGGCTAGGTCGTGGTCCAGGTAATGTACCGTCATCTAGAAGGATGCCTGTGGATTTTAGTCCAAGAGGGCCGTCATCTATGTTTTCTCCCCCCAACACCCCTATGGGGCTGCGTGGGCCTTCTGCACAGGTTCGCAGTGGTGGCTCTCAGGATGTTCGTCGTGATGATAGATTATCACATGAGAGTAGAAATTTGTCAGTTCATTTGCCTCAAAGACCTTTAGGTGGTGATTCTATAACTTTGGGTCCACAAGGTGGTCTTGCAAGAGGAATGTCCTTTAGAGGGCCAGCTGGAATTCCAAGTTCTTCTGTTCCTGATGCACTCCCAGTTGCTGCTGATTCTCGAAGAATGATTTCTGGCCTTAATGGTTATGCTAATTCATCAGACCGTGCTCAGTACAGCACTAGAGAAGATCTCATGCCAAGATATGCAACAGACAGATTTTCTGGTCCAACTGCTCATGATCAATCAGCTGCTCAGGAGCGTATTATTAATTATGGTAATAAGGAGCTGAGAAATGCAGATTGGAATCTTGAGAGACCTGTTGCAACTTTAACTGCTGGTGTGCAAGGATCTGCAGTCCCAGAAGAACGACTGCGGGACATGTCCATGGCAGCAATTAAAGAATACTACAGTGCTAGAGATGTAAAAGAAGTTGCGCTATGTGTCAAAGATCTAAACTCTCCAAGCTATCATCCCTCGATGATTTCTCTATGGGTCACAGACTCGTTTGAGAGAAAGGACACAGAAAGAGATCATTTGGCCAAATTACTAGTGAACCTAACAAAGTCTCAGGATGGCACCTTGAGTCAGTCTCAACTTATCCTAGGGTTTGAATCTGTTTTAAGTGGTCTGGAAGATGCTGTTAATGATGCCCCCAGAGCACCTGAATTTCTAGGCCGCATTTTTGCCAGAGTTGTGACGGAAAATGTCATCTCTTTGAAAGAGATCGGCTGGCTATTACATGAAGGTGGAGAGGAGCCAGGCCAACTTTTAGAAAATGGACTTGCAGCACATGTTCTTGGAAGCACCTTGGAGGCAATAAAAATGGAGAAGGGGGATGCTGTTCTGAGTGAGTTACGCTCAAACTCTAACTTGAGGCTGGAGACTTTCCGGTCACCTAATGCCATTATATCAAGAAAGTTAGAAAATTTTATTTAG 5487 0.4365 MSFNQSRSDKSDNHHRKSGRSGSFNQQRGSSGTYVKGVGGGPAPSPVITSGSSPPSDRRVNPPPVNSAESNSASTGGTIPNGAHTQQSPEASDAPVTNAAAKLSELSSVQKSTRVVPKAPTPRPATVSSDTAAPTTPAKAPGDSSKPFAVQFGSISPGFMNGISVPARTSSAPPNLDEQKRDQVRHDSFRPVPSVPTPPKQVPPPNNGGVMDQSNAVEAPSVNKAKKEEHVSALPPSSQVQKPSVAMTGISMAMPYHHQSQAPVQFGVPNPQIQSQGLTAASLQMPISMHLPMGNVAQVQQQVFVSGLQHPIHAQGIMHQGQNLSFTSQMSPQLPHQLGNTGINMNPQYSQQQGGKFAGPRKTTTVRITHPETHEELRFDVDKKADSHSDVTSSSARSYPNILSQSQPVQSFTASLNYYHPSSTYSGSSLFIPPSSSVPLSSSHVTPNSQQPRFNYPVNQAPQNAGFNNQISLSSLPVSKTGTIVPGHGEMPNLEHPRDVPKVISSTTFGLTHASIKTSGGSGVKTGEFPSSSRASIDAGSTVSQKGSDNYSETSSQHSKSSSDSFVPGSLPKQPAAGSAEKLASTPLMPSSASVSENSASVVSNNEGRRKESLSRSNSMTDNHKKTGKRGESLHQVPVKSLMVVNVPSQVVDSIMPDSEVSDTVENKKPFAEITSEDSSSTPEALSVTVNSDNVPDANEMNIDPSAEGFVCISAEGVGALGVDSLKNHEHDKLEESSQQDELSKTQILEGGNKNEKSSDVFKQKSDDDGMKFKETEQDAAQESQDVPQRLEWQDESTNCSSECDRKGDNLGMSTSNNLDSRDIYLNRNDSTVSNESICANSATSDENSGDLPEATSKHSKDCSENADSGSVSLPTSVNKDRPISEPNKLKTTTKGKKKRKEILQKADAAGSTSDLYNAYKRTEEKKEVVTSESKESMLPGSLKQLPNEAAQSDATATEKDEHDEAEPDDWEDAADMSSPKLEVADKTQLISDGSELMEKKYSRDFLLKFEEQCIDVPDGFEIPADVAEVLMNSNITGSRVERDSHLSPGRIIDRPGGMSRVDRRGSGKFEEERWSKVPGPFNSGHDIRMDGFGGNAGFRPGQGGNFGVLRNPRAQMPLQYAGGILSGPMQSLGNQGVMQRNSPDGERWHRATNYQQRGLIPSPQTPLQMMHKAEKKYEVGKVTDEEQAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNAGTLTGVISQIFEKALMEPTFCEMYANFCLHLAAELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKDDEGEVKQSNEEREEKRIKARRRMLGNIRLIGELYKKKMLTERIMHACITKLLGSYKDPDEEDIEALCKLMSTIGAIIDHPKAKEHIDAYFERMKLLSNNMNLSSRVRFMLKDAIDLRKNKWQQKRKIEGPKKIEEVHRDAAQERQAQTGRLGRGPGNVPSSRRMPVDFSPRGPSSMFSPPNTPMGLRGPSAQVRSGGSQDVRRDDRLSHESRNLSVHLPQRPLGGDSITLGPQGGLARGMSFRGPAGIPSSSVPDALPVAADSRRMISGLNGYANSSDRAQYSTREDLMPRYATDRFSGPTAHDQSAAQERIINYGNKELRNADWNLERPVATLTAGVQGSAVPEERLRDMSMAAIKEYYSARDVKEVALCVKDLNSPSYHPSMISLWVTDSFERKDTERDHLAKLLVNLTKSQDGTLSQSQLILGFESVLSGLEDAVNDAPRAPEFLGRIFARVVTENVISLKEIGWLLHEGGEEPGQLLENGLAAHVLGSTLEAIKMEKGDAVLSELRSNSNLRLETFRSPNAIISRKLENFI 1828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0855 1828 Coils Coil 1273 1311 - -
Prci12g0855 1828 SUPERFAMILY ARM repeat 1634 1819 IPR016024 -
Prci12g0855 1828 SUPERFAMILY ARM repeat 1185 1415 IPR016024 -
Prci12g0855 1828 SMART if4_15 1191 1413 IPR003890 GO:0003723|GO:0005515
Prci12g0855 1828 MobiDBLite consensus disorder prediction 436 457 - -
Prci12g0855 1828 SMART ma3_7 1641 1755 IPR003891 -
Prci12g0855 1828 MobiDBLite consensus disorder prediction 1415 1437 - -
Prci12g0855 1828 MobiDBLite consensus disorder prediction 514 569 - -
Prci12g0855 1828 MobiDBLite consensus disorder prediction 756 781 - -
Prci12g0855 1828 MobiDBLite consensus disorder prediction 585 608 - -
Prci12g0855 1828 MobiDBLite consensus disorder prediction 63 94 - -
Prci12g0855 1828 MobiDBLite consensus disorder prediction 1415 1505 - -
Prci12g0855 1828 MobiDBLite consensus disorder prediction 1491 1505 - -
Prci12g0855 1828 FunFam Eukaryotic translation initiation factor 4G 1191 1426 - -
Prci12g0855 1828 MobiDBLite consensus disorder prediction 924 982 - -
Prci12g0855 1828 MobiDBLite consensus disorder prediction 657 700 - -
Prci12g0855 1828 Pfam MIF4G domain 1191 1413 IPR003890 GO:0003723|GO:0005515
Prci12g0855 1828 MobiDBLite consensus disorder prediction 163 177 - -
Prci12g0855 1828 MobiDBLite consensus disorder prediction 935 954 - -
Prci12g0855 1828 MobiDBLite consensus disorder prediction 782 851 - -
Prci12g0855 1828 ProSiteProfiles MI domain profile. 1640 1764 IPR003891 -
Prci12g0855 1828 MobiDBLite consensus disorder prediction 609 633 - -
Prci12g0855 1828 MobiDBLite consensus disorder prediction 514 635 - -
Prci12g0855 1828 Gene3D - 1634 1828 - -
Prci12g0855 1828 MobiDBLite consensus disorder prediction 1041 1083 - -
Prci12g0855 1828 MobiDBLite consensus disorder prediction 101 115 - -
Prci12g0855 1828 MobiDBLite consensus disorder prediction 866 883 - -
Prci12g0855 1828 FunFam Eukaryotic translation initiation factor 4G 1634 1827 - -
Prci12g0855 1828 MobiDBLite consensus disorder prediction 1057 1076 - -
Prci12g0855 1828 MobiDBLite consensus disorder prediction 731 907 - -
Prci12g0855 1828 MobiDBLite consensus disorder prediction 1282 1308 - -
Prci12g0855 1828 Pfam MA3 domain 1645 1754 IPR003891 -
Prci12g0855 1828 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 345 1827 IPR045208 GO:0003743
Prci12g0855 1828 MobiDBLite consensus disorder prediction 1 242 - -
Prci12g0855 1828 MobiDBLite consensus disorder prediction 674 699 - -
Prci12g0855 1828 Gene3D - 1191 1426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0855 Prci-Chr12 9527285 9536060 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0855 1 1827 Eukaryotic Initiation Factors Gene Family AT3G60240 43.451 0.0 1208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0855 K03260 - gmx:100796636 2108.95