Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0854 ATGTCCTTCAATCAATCAAGGTCCGATAAGAGCGACAATCATCACCGTAAATCCGGGCGATCAGGGAGCTTCAATCAGCAGCGAGGTTCCTCAGGCACGTACGTCAAGGGTGTTGGCGGCGGGCCCGCGCCTTCTCCCGTGATCACTTCGGGTTCCTCACCGCCCTCTGATCGGAGTTTTAAGAGGTCTGATTATCCACATGGTGGGCAATCTAGGGTAAACCCTCCCCCTGTGAATTCAGCCGAGTCTAATAGTGCTTCTACAGGCGGGACGATACCAAATGGTGCCCATACACAGCAATCACCGGCTGCCAAGTTATCTGAACTGTCATCTGTTCAGAAGAGCACCAGAGTTGTTCCGAAAGCTCCAACTCCTCGACCTGCCACCGTGAGTTCTGATACAGCAGCTCCTACAACCCCTGCCAAGGCCCCTGGAGATTCATCCAAGCCGTTTGCTGTCCAATTTGGGTCCATTAGTCCCGGTTTCATGAATGGGATTTCTGTTCCTGCTCGCACAAGCTCAGCTCCTCCAAATTTGGATGAGCAGAAAAGAGATCAGGTTCGTCATGATTCTTTTAGACCTGTGCCTTCAGTGCCAACACCTCCAAAGCAGGTACCACCACCGAATAATGGTGGTGTTATGGACCAATCTAATGCTGTAGAGGCTCCTTCAGTGAACAAGGCGAAAAAGGAGGAGCACGTGTCAGCTTTGCCCCCATCAAGCCAGGTGCAAAAGCCATCTGTTGCCATGACTGGGATTTCAATGGCGATGCCATATCATCATCAATCACAGGCACCTGTACAGTTTGGTGTTCCTAATCCACAGATTCAATCTCAGGGATTGACGGCAGCATCTCTTCAGATGCCTATATCAATGCATTTACCAATGGGAAATGTTGCACAAGTACAACAGCAAGTTTTTGTTTCAGGACTTCAACATCCTATTCATGCTCAGGGAATTATGCATCAGGGACAAAACTTAAGTTTCACTTCTCAAATGAGTCCTCAGTTGCCCCATCAGTTAGGTAACACAGGTATTAACATGAACCCACAGTATTCCCAGCAGCAAGGGGGGAAATTTGCTGGTCCTCGCAAAACTACCACTGTCAGGATTACTCATCCTGAGACGCATGAAGAGCTGAGGTTTGACGTTGACAAAAAGGCAGATTCACATTCAGATGTTACCTCATCAAGTGCTAGGTCTTATCCTAATATACTTTCTCAGTCTCAACCTGTTCAATCGTTTACCGCTTCCCTCAACTATTACCACCCATCTAGCACATACAGTGGCAGCTCTCTTTTTATCCCACCTTCAAGTTCTGTTCCTTTATCAAGTAGCCACGTAACTCCTAATTCTCAGCAGCCAAGATTTAACTATCCAGTGAACCAGGCCCCCCAAAATGCAGGTTTTAACAATCAAATATCTCTTAGTTCCTTGCCTGTTAGTAAGACTGGCACTATTGTTCCTGGCCATGGTGAAATGCCAAATCTGGAACATCCTCGTGATGTCCCTAAAGTGATTTCATCAACTACATTTGGGCTCACTCATGCTAGCATCAAAACCAGTGGTGGCTCTGGTGTTAAAACGGGTGAATTTCCTAGCTCTTCGAGGGCATCTATTGATGCTGGCTCCACTGTGTCTCAGAAAGGGTCTGATAATTATTCTGAGACCTCTTCACAGCATTCAAAGTCATCCAGTGATTCTTTTGTTCCAGGGTCATTGCCAAAACAACCTGCTGCTGGATCTGCCGAGAAGCTTGCATCCACTCCTTTGATGCCTTCTTCAGCTTCTGTGAGTGAGAATTCTGCCTCAGTTGTGTCCAACAATGAAGGCAGAAGGAAGGAATCTCTTAGTAGGTCAAACTCTATGACTGATAATCACAAGAAAACAGGGAAGAGAGGAGAATCACTGCATCAGGTGCCTGTAAAATCTCTGATGGTGGTTAATGTACCTTCTCAAGTTGTTGATAGCATTATGCCGGATAGTGAAGTTTCTGATACTGTAGAAAACAAAAAGCCTTTTGCAGAAATAACCAGTGAAGATAGCTCTAGCACACCAGAGGCATTGTCAGTTACAGTTAACAGTGATAATGTTCCTGATGCCAATGAAATGAACATTGACCCTTCTGCTGAAGGTTTTGTTTGCATCTCAGCTGAAGGAGTTGGTGCTTTAGGTGTTGATAGTTTGAAGAACCACGAACATGATAAGTTAGAGGAATCATCACAACAGGATGAACTTTCAAAGACGCAGATTCTTGAAGGGGGTAATAAAAATGAAAAATCTTCTGATGTATTTAAACAAAAAAGTGATGACGATGGGATGAAGTTTAAAGAAACAGAACAGGATGCAGCTCAGGAATCACAAGATGTACCACAAAGACTGGAATGGCAGGATGAATCTACAAATTGTAGCTCAGAATGTGACAGAAAGGGTGATAATTTAGGCATGTCCACCTCAAATAATTTGGATTCTAGAGATATCTATTTAAATAGAAATGATAGTACGGTTAGTAATGAATCTATTTGTGCTAATTCTGCCACATCTGATGAGAATTCTGGTGATCTCCCAGAAGCAACTTCAAAACATAGCAAGGATTGTTCAGAGAATGCAGACAGTGGCTCCGTTTCCCTTCCAACATCAGTTAACAAGGATAGACCTATTTCAGAGCCAAATAAGCTGAAAACTACAACCAAAGGCAAGAAGAAAAGAAAGGAGATTCTTCAGAAAGCAGATGCTGCTGGGTCAACTTCTGATCTCTATAATGCATACAAGAGAACTGAGGAAAAGAAAGAAGTTGTAACTTCAGAGAGCAAAGAAAGCATGTTACCAGGAAGTTTAAAGCAGTTGCCTAATGAGGCTGCTCAATCAGATGCTACAGCGACTGAGAAAGATGAACATGATGAAGCTGAGCCTGATGACTGGGAAGATGCTGCTGACATGTCTTCTCCAAAATTGGAAGTTGCAGATAAAACTCAACTGATCAGTGATGGAAGTGAACTTATGGAGAAAAAATACTCTAGAGATTTCCTTTTAAAATTTGAAGAGCAATGCATTGATGTTCCTGATGGTTTTGAAATTCCAGCAGACGTTGCTGAGGTTTTGATGAATTCTAATATTACTGGTTCTCGTGTTGAACGTGATTCACATCTTAGTCCAGGAAGAATTATAGATAGACCTGGTGGGATGTCTCGAGTGGATAGACGTGGGTCTGGGAAGTTTGAAGAAGAGCGGTGGAGTAAAGTCCCTGGACCATTTAATTCAGGACATGACATTCGTATGGATGGATTTGGAGGTAATGCAGGTTTTCGACCTGGTCAAGGAGGCAATTTTGGTGTTTTGAGGAACCCACGTGCTCAGATGCCTCTGCAATATGCTGGCGGGATCCTTTCTGGACCAATGCAATCCTTGGGAAATCAGGGAGTTATGCAGAGAAATAGCCCTGATGGTGAGAGGTGGCACCGAGCAACTAACTACCAGCAGAGGGGTTTAATTCCTTCTCCTCAAACCCCACTGCAGATGATGCATAAAGCTGAGAAAAAGTATGAGGTGGGTAAGGTGACAGATGAGGAACAAGCAAAGCAAAGACAGTTGAAAGCCATTTTGAACAAGTTAACTCCTCAGAATTTTGAGAAACTTTTTGAGCAGGTAAAAGCAGTTAATATTGACAATGCTGGCACTCTTACTGGTGTAATCTCTCAAATATTTGAGAAAGCTCTAATGGAGCCTACCTTTTGTGAAATGTATGCCAATTTCTGCTTACATCTAGCTGCTGAGTTGCCTGATTTCAGTGAAGACAATGAAAAGATAACTTTTAAGAGATTATTGTTAAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAGGCTAATAAGGATGATGAGGGCGAGGTGAAGCAATCTAATGAAGAGAGGGAAGAGAAACGAATTAAGGCGAGAAGACGCATGTTAGGTAATATACGGTTGATTGGAGAGTTATATAAGAAAAAAATGTTGACAGAGAGGATAATGCATGCGTGCATCACGAAGTTACTGGGATCGTATAAGGACCCTGACGAAGAAGATATAGAAGCTTTGTGCAAGCTGATGAGTACTATAGGGGCGATAATTGATCATCCCAAAGCCAAGGAACACATTGATGCTTATTTTGAAAGGATGAAATTGTTATCAAACAACATGAATTTATCTTCTCGAGTGAGATTCATGTTGAAGGATGCTATTGATCTTAGAAAGAACAAATGGCAACAGAAGCGGAAAATTGAAGGTCCAAAGAAGATTGAGGAGGTGCACAGAGATGCTGCCCAAGAGAGGCAGGCCCAAACTGGTAGGCTAGGTCGTGGTCCAGGTAATGTACCGTCATCTAGAAGGATGCCTGTGGATTTTAGTCCAAGAGGGCCGTCATCTATGTTTTCTCCCCCCAACACCCCTATGGGGCTGCGTGGGCCTTCTGCACAGGTTCGCAGTGGTGGCTCTCAGGATGTTCGTCGTGATGATAGATTATCACATGAGAGTAGAAATTTGTCAGTTCATTTGCCTCAAAGACCTTTAGGTGGTGATTCTATAACTTTGGGTCCACAAGGTGGTCTTGCAAGAGGAATGTCCTTTAGAGGGCCAGCTGGAATTCCAAGTTCTTCTGTTCCTGATGCACTCCCAGTTGCTGCTGATTCTCGAAGAATGATTTCTGGCCTTAATGGTTATGCTAATTCATCAGACCGTGCTCAGTACAGCACTAGAGAAGATCTCATGCCAAGATATGCAACAGACAGATTTTCTGGTCCAACTGCTCATGATCAATCAGCTGCTCAGGAGCGTATTATTAATTATGGTAATAAGGAGCTGAGAAATGCAGATTGGAATCTTGAGAGACCTGTTGCAACTTTAACTGCTGGTGTGCAAGGATCTGCAGTCCCAGAAGAACGACTGCGGGACATGTCCATGGCAGCAATTAAAGAATACTACAGTGCTAGAGATGTAAAAGAAGTTGCGCTATGTGTCAAAGATCTAAACTCTCCAAGCTATCATCCCTCGATGATTTCTCTATGGGTCACAGACTCGTTTGAGAGAAAGGACACAGAAAGAGATCATTTGGCCAAATTACTAGTGAACCTAACAAAGTCTCAGGATGGCACCTTGAGTCAGTCTCAACTTATCCTAGGGTTTGAATCTGTTTTAAGTGGTCTGGAAGATGCTGTTAATGATGCCCCCAGAGCACCTGAATTTCTAGGCCGCATTTTTGCCAGAGTTGTGACGGAAAATGTCATCTCTTTGAAAGAGATCGGCTGGCTATTACATGAAGGTGGAGAGGAGCCAGGCCAACTTTTAGAAAATGGACTTGCAGCACATGTTCTTGGAAGCACCTTGGAGGCAATAAAAATGGAGAAGGGGGATGCTGTTCTGAGTGAGTTACGCTCAAACTCTAACTTGAGGCTGGAGACTTTCCGGTCACCTAATGCCATTATATCAAGAAAGTTAGAAAATTTTATTTAG 5496 0.4363 MSFNQSRSDKSDNHHRKSGRSGSFNQQRGSSGTYVKGVGGGPAPSPVITSGSSPPSDRSFKRSDYPHGGQSRVNPPPVNSAESNSASTGGTIPNGAHTQQSPAAKLSELSSVQKSTRVVPKAPTPRPATVSSDTAAPTTPAKAPGDSSKPFAVQFGSISPGFMNGISVPARTSSAPPNLDEQKRDQVRHDSFRPVPSVPTPPKQVPPPNNGGVMDQSNAVEAPSVNKAKKEEHVSALPPSSQVQKPSVAMTGISMAMPYHHQSQAPVQFGVPNPQIQSQGLTAASLQMPISMHLPMGNVAQVQQQVFVSGLQHPIHAQGIMHQGQNLSFTSQMSPQLPHQLGNTGINMNPQYSQQQGGKFAGPRKTTTVRITHPETHEELRFDVDKKADSHSDVTSSSARSYPNILSQSQPVQSFTASLNYYHPSSTYSGSSLFIPPSSSVPLSSSHVTPNSQQPRFNYPVNQAPQNAGFNNQISLSSLPVSKTGTIVPGHGEMPNLEHPRDVPKVISSTTFGLTHASIKTSGGSGVKTGEFPSSSRASIDAGSTVSQKGSDNYSETSSQHSKSSSDSFVPGSLPKQPAAGSAEKLASTPLMPSSASVSENSASVVSNNEGRRKESLSRSNSMTDNHKKTGKRGESLHQVPVKSLMVVNVPSQVVDSIMPDSEVSDTVENKKPFAEITSEDSSSTPEALSVTVNSDNVPDANEMNIDPSAEGFVCISAEGVGALGVDSLKNHEHDKLEESSQQDELSKTQILEGGNKNEKSSDVFKQKSDDDGMKFKETEQDAAQESQDVPQRLEWQDESTNCSSECDRKGDNLGMSTSNNLDSRDIYLNRNDSTVSNESICANSATSDENSGDLPEATSKHSKDCSENADSGSVSLPTSVNKDRPISEPNKLKTTTKGKKKRKEILQKADAAGSTSDLYNAYKRTEEKKEVVTSESKESMLPGSLKQLPNEAAQSDATATEKDEHDEAEPDDWEDAADMSSPKLEVADKTQLISDGSELMEKKYSRDFLLKFEEQCIDVPDGFEIPADVAEVLMNSNITGSRVERDSHLSPGRIIDRPGGMSRVDRRGSGKFEEERWSKVPGPFNSGHDIRMDGFGGNAGFRPGQGGNFGVLRNPRAQMPLQYAGGILSGPMQSLGNQGVMQRNSPDGERWHRATNYQQRGLIPSPQTPLQMMHKAEKKYEVGKVTDEEQAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNAGTLTGVISQIFEKALMEPTFCEMYANFCLHLAAELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKDDEGEVKQSNEEREEKRIKARRRMLGNIRLIGELYKKKMLTERIMHACITKLLGSYKDPDEEDIEALCKLMSTIGAIIDHPKAKEHIDAYFERMKLLSNNMNLSSRVRFMLKDAIDLRKNKWQQKRKIEGPKKIEEVHRDAAQERQAQTGRLGRGPGNVPSSRRMPVDFSPRGPSSMFSPPNTPMGLRGPSAQVRSGGSQDVRRDDRLSHESRNLSVHLPQRPLGGDSITLGPQGGLARGMSFRGPAGIPSSSVPDALPVAADSRRMISGLNGYANSSDRAQYSTREDLMPRYATDRFSGPTAHDQSAAQERIINYGNKELRNADWNLERPVATLTAGVQGSAVPEERLRDMSMAAIKEYYSARDVKEVALCVKDLNSPSYHPSMISLWVTDSFERKDTERDHLAKLLVNLTKSQDGTLSQSQLILGFESVLSGLEDAVNDAPRAPEFLGRIFARVVTENVISLKEIGWLLHEGGEEPGQLLENGLAAHVLGSTLEAIKMEKGDAVLSELRSNSNLRLETFRSPNAIISRKLENFI 1831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0854 1831 ProSiteProfiles MI domain profile. 1643 1767 IPR003891 -
Prci12g0854 1831 MobiDBLite consensus disorder prediction 1419 1508 - -
Prci12g0854 1831 MobiDBLite consensus disorder prediction 166 180 - -
Prci12g0854 1831 MobiDBLite consensus disorder prediction 938 957 - -
Prci12g0854 1831 MobiDBLite consensus disorder prediction 1285 1312 - -
Prci12g0854 1831 Pfam MA3 domain 1648 1757 IPR003891 -
Prci12g0854 1831 MobiDBLite consensus disorder prediction 759 784 - -
Prci12g0854 1831 MobiDBLite consensus disorder prediction 660 706 - -
Prci12g0854 1831 MobiDBLite consensus disorder prediction 1060 1079 - -
Prci12g0854 1831 MobiDBLite consensus disorder prediction 1494 1508 - -
Prci12g0854 1831 FunFam Eukaryotic translation initiation factor 4G 1637 1830 - -
Prci12g0854 1831 SMART ma3_7 1644 1758 IPR003891 -
Prci12g0854 1831 MobiDBLite consensus disorder prediction 869 886 - -
Prci12g0854 1831 SUPERFAMILY ARM repeat 1637 1822 IPR016024 -
Prci12g0854 1831 MobiDBLite consensus disorder prediction 785 854 - -
Prci12g0854 1831 SUPERFAMILY ARM repeat 1188 1418 IPR016024 -
Prci12g0854 1831 MobiDBLite consensus disorder prediction 517 572 - -
Prci12g0854 1831 MobiDBLite consensus disorder prediction 588 611 - -
Prci12g0854 1831 Pfam MIF4G domain 1194 1416 IPR003890 GO:0003723|GO:0005515
Prci12g0854 1831 SMART if4_15 1194 1416 IPR003890 GO:0003723|GO:0005515
Prci12g0854 1831 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 347 1830 IPR045208 GO:0003743
Prci12g0854 1831 FunFam Eukaryotic translation initiation factor 4G 1194 1429 - -
Prci12g0854 1831 MobiDBLite consensus disorder prediction 73 118 - -
Prci12g0854 1831 MobiDBLite consensus disorder prediction 927 984 - -
Prci12g0854 1831 MobiDBLite consensus disorder prediction 612 636 - -
Prci12g0854 1831 MobiDBLite consensus disorder prediction 517 638 - -
Prci12g0854 1831 MobiDBLite consensus disorder prediction 734 910 - -
Prci12g0854 1831 Gene3D - 1637 1831 - -
Prci12g0854 1831 MobiDBLite consensus disorder prediction 677 702 - -
Prci12g0854 1831 MobiDBLite consensus disorder prediction 1419 1440 - -
Prci12g0854 1831 Gene3D - 1194 1429 - -
Prci12g0854 1831 Coils Coil 1276 1314 - -
Prci12g0854 1831 MobiDBLite consensus disorder prediction 1 217 - -
Prci12g0854 1831 MobiDBLite consensus disorder prediction 1044 1086 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0854 Prci-Chr12 9527285 9536060 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0854 1 1830 Eukaryotic Initiation Factors Gene Family AT3G60240 43.911 0.0 1219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0854 K03260 - gmx:100796636 2103.56