Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0853 ATGTCCTTCAATCAATCAAGGTCCGATAAGAGCGACAATCATCACCGTAAATCCGGGCGATCAGGGAGCTTCAATCAGCAGCGAGGTTCCTCAGGCACGTACGTCAAGGGTGTTGGCGGCGGGCCCGCGCCTTCTCCCGTGATCACTTCGGGTTCCTCACCGCCCTCTGATCGGAGTTTTAAGAGGTCTGATTATCCACATGGTGGGCAATCTAGGGTAAACCCTCCCCCTGTGAATTCAGCCGAGTCTAATAGTGCTTCTACAGGCGGGACGATACCAAATGGTGCCCATACACAGCAATCACCGGTTACAAATGCAGCTGCCAAGTTATCTGAACTGTCATCTGTTCAGAAGAGCACCAGAGTTGTTCCGAAAGCTCCAACTCCTCGACCTGCCACCGTGAGTTCTGATACAGCAGCTCCTACAACCCCTGCCAAGGCCCCTGGAGATTCATCCAAGCCGTTTGCTGTCCAATTTGGGTCCATTAGTCCCGGTTTCATGAATGGGATTTCTGTTCCTGCTCGCACAAGCTCAGCTCCTCCAAATTTGGATGAGCAGAAAAGAGATCAGGTTCGTCATGATTCTTTTAGACCTGTGCCTTCAGTGCCAACACCTCCAAAGCAGGTACCACCACCGAATAATGGTGGTGTTATGGACCAATCTAATGCTGTAGAGGCTCCTTCAGTGAACAAGGCGAAAAAGGAGGAGCACGTGTCAGCTTTGCCCCCATCAAGCCAGGTGCAAAAGCCATCTGTTGCCATGACTGGGATTTCAATGGCGATGCCATATCATCATCAATCACAGGCACCTGTACAGTTTGGTGTTCCTAATCCACAGATTCAATCTCAGGGATTGACGGCAGCATCTCTTCAGATGCCTATATCAATGCATTTACCAATGGGAAATGTTGCACAAGTACAACAGCAAGTTTTTGTTTCAGGACTTCAACATCCTATTCATGCTCAGGGAATTATGCATCAGGGACAAAACTTAAGTTTCACTTCTCAAATGAGTCCTCAGTTGCCCCATCAGTTAGGTAACACAGGTATTAACATGAACCCACAGTATTCCCAGCAGCAAGGGGGGAAATTTGCTGGTCCTCGCAAAACTACCACTGTCAGGATTACTCATCCTGAGACGCATGAAGAGCTGAGGTTTGACGTTGACAAAAAGGCAGATTCACATTCAGATGTTACCTCATCAAGTGCTAGGTCTTATCCTAATATACTTTCTCAGTCTCAACCTGTTCAATCGTTTACCGCTTCCCTCAACTATTACCACCCATCTAGCACATACAGTGGCAGCTCTCTTTTTATCCCACCTTCAAGTTCTGTTCCTTTATCAAGTAGCCACGTAACTCCTAATTCTCAGCAGCCAAGATTTAACTATCCAGTGAACCAGGCCCCCCAAAATGCAGGTTTTAACAATCAAATATCTCTTAGTTCCTTGCCTGTTAGTAAGACTGGCACTATTGTTCCTGGCCATGGTGAAATGCCAAATCTGGAACATCCTCGTGATGTCCCTAAAGTGATTTCATCAACTACATTTGGGCTCACTCATGCTAGCATCAAAACCAGTGGTGGCTCTGGTGTTAAAACGGGTGAATTTCCTAGCTCTTCGAGGGCATCTATTGATGCTGGCTCCACTGTGTCTCAGAAAGGGTCTGATAATTATTCTGAGACCTCTTCACAGCATTCAAAGTCATCCAGTGATTCTTTTGTTCCAGGGTCATTGCCAAAACAACCTGCTGCTGGATCTGCCGAGAAGCTTGCATCCACTCCTTTGATGCCTTCTTCAGCTTCTGTGAGTGAGAATTCTGCCTCAGTTGTGTCCAACAATGAAGGCAGAAGGAAGGAATCTCTTAGTAGGTCAAACTCTATGACTGATAATCACAAGAAAACAGGGAAGAGAGGAGAATCACTGCATCAGGTGCCTGTAAAATCTCTGATGGTGGTTAATGTACCTTCTCAAGTTGTTGATAGCATTATGCCGGATAGTGAAGTTTCTGATACTGTAGAAAACAAAAAGCCTTTTGCAGAAATAACCAGTGAAGATAGCTCTAGCACACCAGAGGCATTGTCAGTTACAGTTAACAGTGATAATGTTCCTGATGCCAATGAAATGAACATTGACCCTTCTGCTGAAGGTTTTGTTTGCATCTCAGCTGAAGGAGTTGGTGCTTTAGGTGTTGATAGTTTGAAGAACCACGAACATGATAAGTTAGAGGAATCATCACAACAGGATGAACTTTCAAAGACGCAGATTCTTGAAGGGGGTAATAAAAATGAAAAATCTTCTGATGTATTTAAACAAAAAAGTGATGACGATGGGATGAAGTTTAAAGAAACAGAACAGGATGCAGCTCAGGAATCACAAGATGTACCACAAAGACTGGAATGGCAGGATGAATCTACAAATTGTAGCTCAGAATGTGACAGAAAGGGTGATAATTTAGGCATGTCCACCTCAAATAATTTGGATTCTAGAGATATCTATTTAAATAGAAATGATAGTACGGTTAGTAATGAATCTATTTGTGCTAATTCTGCCACATCTGATGAGAATTCTGGTGATCTCCCAGAAGCAACTTCAAAACATAGCAAGGATTGTTCAGAGAATGCAGACAGTGGCTCCGTTTCCCTTCCAACATCAGTTAACAAGGATAGACCTATTTCAGAGCCAAATAAGCTGAAAACTACAACCAAAGGCAAGAAGAAAAGAAAGGAGATTCTTCAGAAAGCAGATGCTGCTGGGTCAACTTCTGATCTCTATAATGCATACAAGAGAACTGAGGAAAAGAAAGAAGTTGTAACTTCAGAGAGCAAAGAAAGCATGTTACCAGGAAGTTTAAAGCAGTTGCCTAATGAGGCTGCTCAATCAGATGCTACAGCGACTGAGAAAGATGAACATGATGAAGCTGAGCCTGATGACTGGGAAGATGCTGCTGACATGTCTTCTCCAAAATTGGAAGTTGCAGATAAAACTCAACTGATCAGTGATGGAAGTGAACTTATGGAGAAAAAATACTCTAGAGATTTCCTTTTAAAATTTGAAGAGCAATGCATTGATGTTCCTGATGGTTTTGAAATTCCAGCAGACGTTGCTGAGGTTTTGATGAATTCTAATATTACTGGTTCTCGTGTTGAACGTGATTCACATCTTAGTCCAGGAAGAATTATAGATAGACCTGGTGGGATGTCTCGAGTGGATAGACGTGGGTCTGGGAAGTTTGAAGAAGAGCGGTGGAGTAAAGTCCCTGGACCATTTAATTCAGGACATGACATTCGTATGGATGGATTTGGAGGTAATGCAGGTTTTCGACCTGGTCAAGGAGGCAATTTTGGTGTTTTGAGGAACCCACGTGCTCAGATGCCTCTGCAATATGCTGGCGGGATCCTTTCTGGACCAATGCAATCCTTGGGAAATCAGGGAGTTATGCAGAGAAATAGCCCTGATGGTGAGAGGTGGCACCGAGCAACTAACTACCAGCAGAGGGGTTTAATTCCTTCTCCTCAAACCCCACTGCAGATGATGCATAAAGCTGAGAAAAAGTATGAGGTGGGTAAGGTGACAGATGAGGAACAAGCAAAGCAAAGACAGTTGAAAGCCATTTTGAACAAGTTAACTCCTCAGAATTTTGAGAAACTTTTTGAGCAGGTAAAAGCAGTTAATATTGACAATGCTGGCACTCTTACTGGTGTAATCTCTCAAATATTTGAGAAAGCTCTAATGGAGCCTACCTTTTGTGAAATGTATGCCAATTTCTGCTTACATCTAGCTGCTGAGTTGCCTGATTTCAGTGAAGACAATGAAAAGATAACTTTTAAGAGATTATTGTTAAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAGGCTAATAAGGATGATGAGGGCGAGGTGAAGCAATCTAATGAAGAGAGGGAAGAGAAACGAATTAAGGCGAGAAGACGCATGTTAGGTAATATACGGTTGATTGGAGAGTTATATAAGAAAAAAATGTTGACAGAGAGGATAATGCATGCGTGCATCACGAAGTTACTGGGATCGTATAAGGACCCTGACGAAGAAGATATAGAAGCTTTGTGCAAGCTGATGAGTACTATAGGGGCGATAATTGATCATCCCAAAGCCAAGGAACACATTGATGCTTATTTTGAAAGGATGAAATTGTTATCAAACAACATGAATTTATCTTCTCGAGTGAGATTCATGTTGAAGGATGCTATTGATCTTAGAAAGAACAAATGGCAACAGAAGCGGAAAATTGAAGGTCCAAAGAAGATTGAGGAGGTGCACAGAGATGCTGCCCAAGAGAGGCAGGCCCAAACTGGTAGGCTAGGTCGTGGTCCAGGTAATGTACCGTCATCTAGAAGGATGCCTGTGGATTTTAGTCCAAGAGGGCCGTCATCTATGTTTTCTCCCCCCAACACCCCTATGGGGCTGCGTGGGCCTTCTGCACAGGTTCGCAGTGGTGGCTCTCAGGATGTTCGTCGTGATGATAGATTATCACATGAGAGTAGAAATTTGTCAGTTCATTTGCCTCAAAGACCTTTAGGTGGTGATTCTATAACTTTGGGTCCACAAGGTGGTCTTGCAAGAGGAATGTCCTTTAGAGGGCCAGCTGGAATTCCAAGTTCTTCTGTTCCTGATGCACTCCCAGTTGCTGCTGATTCTCGAAGAATGATTTCTGGCCTTAATGGTTATGCTAATTCATCAGACCGTGCTCAGTACAGCACTAGAGAAGATCTCATGCCAAGATATGCAACAGACAGATTTTCTGGTCCAACTGCTCATGATCAATCAGCTGCTCAGGAGCGTATTATTAATTATGGTAATAAGGAGCTGAGAAATGCAGATTGGAATCTTGAGAGACCTGTTGCAACTTTAACTGCTGGTGTGCAAGGATCTGCAGTCCCAGAAGAACGACTGCGGGACATGTCCATGGCAGCAATTAAAGAATACTACAGTGCTAGAGATGTAAAAGAAGTTGCGCTATGTGTCAAAGATCTAAACTCTCCAAGCTATCATCCCTCGATGATTTCTCTATGGGTCACAGACTCGTTTGAGAGAAAGGACACAGAAAGAGATCATTTGGCCAAATTACTAGTGAACCTAACAAAGTCTCAGGATGGCACCTTGAGTCAGTCTCAACTTATCCTAGGGTTTGAATCTGTTTTAAGTGGTCTGGAAGATGCTGTTAATGATGCCCCCAGAGCACCTGAATTTCTAGGCCGCATTTTTGCCAGAGTTGTGACGGAAAATGTCATCTCTTTGAAAGAGATCGGCTGGCTATTACATGAAGGTGGAGAGGAGCCAGGCCAACTTTTAGAAAATGGACTTGCAGCACATGTTCTTGGAAGCACCTTGGAGGCAATAAAAATGGAGAAGGGGGATGCTGTTCTGAGTGAGTTACGCTCAAACTCTAACTTGAGGCTGGAGACTTTCCGGTCACCTAATGCCATTATATCAAGAAAGTTAGAAAATTTTATTTAG 5508 0.4361 MSFNQSRSDKSDNHHRKSGRSGSFNQQRGSSGTYVKGVGGGPAPSPVITSGSSPPSDRSFKRSDYPHGGQSRVNPPPVNSAESNSASTGGTIPNGAHTQQSPVTNAAAKLSELSSVQKSTRVVPKAPTPRPATVSSDTAAPTTPAKAPGDSSKPFAVQFGSISPGFMNGISVPARTSSAPPNLDEQKRDQVRHDSFRPVPSVPTPPKQVPPPNNGGVMDQSNAVEAPSVNKAKKEEHVSALPPSSQVQKPSVAMTGISMAMPYHHQSQAPVQFGVPNPQIQSQGLTAASLQMPISMHLPMGNVAQVQQQVFVSGLQHPIHAQGIMHQGQNLSFTSQMSPQLPHQLGNTGINMNPQYSQQQGGKFAGPRKTTTVRITHPETHEELRFDVDKKADSHSDVTSSSARSYPNILSQSQPVQSFTASLNYYHPSSTYSGSSLFIPPSSSVPLSSSHVTPNSQQPRFNYPVNQAPQNAGFNNQISLSSLPVSKTGTIVPGHGEMPNLEHPRDVPKVISSTTFGLTHASIKTSGGSGVKTGEFPSSSRASIDAGSTVSQKGSDNYSETSSQHSKSSSDSFVPGSLPKQPAAGSAEKLASTPLMPSSASVSENSASVVSNNEGRRKESLSRSNSMTDNHKKTGKRGESLHQVPVKSLMVVNVPSQVVDSIMPDSEVSDTVENKKPFAEITSEDSSSTPEALSVTVNSDNVPDANEMNIDPSAEGFVCISAEGVGALGVDSLKNHEHDKLEESSQQDELSKTQILEGGNKNEKSSDVFKQKSDDDGMKFKETEQDAAQESQDVPQRLEWQDESTNCSSECDRKGDNLGMSTSNNLDSRDIYLNRNDSTVSNESICANSATSDENSGDLPEATSKHSKDCSENADSGSVSLPTSVNKDRPISEPNKLKTTTKGKKKRKEILQKADAAGSTSDLYNAYKRTEEKKEVVTSESKESMLPGSLKQLPNEAAQSDATATEKDEHDEAEPDDWEDAADMSSPKLEVADKTQLISDGSELMEKKYSRDFLLKFEEQCIDVPDGFEIPADVAEVLMNSNITGSRVERDSHLSPGRIIDRPGGMSRVDRRGSGKFEEERWSKVPGPFNSGHDIRMDGFGGNAGFRPGQGGNFGVLRNPRAQMPLQYAGGILSGPMQSLGNQGVMQRNSPDGERWHRATNYQQRGLIPSPQTPLQMMHKAEKKYEVGKVTDEEQAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNAGTLTGVISQIFEKALMEPTFCEMYANFCLHLAAELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKDDEGEVKQSNEEREEKRIKARRRMLGNIRLIGELYKKKMLTERIMHACITKLLGSYKDPDEEDIEALCKLMSTIGAIIDHPKAKEHIDAYFERMKLLSNNMNLSSRVRFMLKDAIDLRKNKWQQKRKIEGPKKIEEVHRDAAQERQAQTGRLGRGPGNVPSSRRMPVDFSPRGPSSMFSPPNTPMGLRGPSAQVRSGGSQDVRRDDRLSHESRNLSVHLPQRPLGGDSITLGPQGGLARGMSFRGPAGIPSSSVPDALPVAADSRRMISGLNGYANSSDRAQYSTREDLMPRYATDRFSGPTAHDQSAAQERIINYGNKELRNADWNLERPVATLTAGVQGSAVPEERLRDMSMAAIKEYYSARDVKEVALCVKDLNSPSYHPSMISLWVTDSFERKDTERDHLAKLLVNLTKSQDGTLSQSQLILGFESVLSGLEDAVNDAPRAPEFLGRIFARVVTENVISLKEIGWLLHEGGEEPGQLLENGLAAHVLGSTLEAIKMEKGDAVLSELRSNSNLRLETFRSPNAIISRKLENFI 1835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0853 1835 Pfam MIF4G domain 1198 1420 IPR003890 GO:0003723|GO:0005515
Prci12g0853 1835 MobiDBLite consensus disorder prediction 1 221 - -
Prci12g0853 1835 MobiDBLite consensus disorder prediction 931 988 - -
Prci12g0853 1835 MobiDBLite consensus disorder prediction 616 640 - -
Prci12g0853 1835 SMART ma3_7 1648 1762 IPR003891 -
Prci12g0853 1835 MobiDBLite consensus disorder prediction 521 642 - -
Prci12g0853 1835 MobiDBLite consensus disorder prediction 738 914 - -
Prci12g0853 1835 SMART if4_15 1198 1420 IPR003890 GO:0003723|GO:0005515
Prci12g0853 1835 SUPERFAMILY ARM repeat 1641 1826 IPR016024 -
Prci12g0853 1835 MobiDBLite consensus disorder prediction 681 706 - -
Prci12g0853 1835 SUPERFAMILY ARM repeat 1192 1422 IPR016024 -
Prci12g0853 1835 MobiDBLite consensus disorder prediction 1423 1444 - -
Prci12g0853 1835 MobiDBLite consensus disorder prediction 664 710 - -
Prci12g0853 1835 Coils Coil 1280 1318 - -
Prci12g0853 1835 Gene3D - 1198 1433 - -
Prci12g0853 1835 MobiDBLite consensus disorder prediction 1048 1090 - -
Prci12g0853 1835 FunFam Eukaryotic translation initiation factor 4G 1198 1433 - -
Prci12g0853 1835 MobiDBLite consensus disorder prediction 1289 1316 - -
Prci12g0853 1835 MobiDBLite consensus disorder prediction 170 184 - -
Prci12g0853 1835 MobiDBLite consensus disorder prediction 1423 1512 - -
Prci12g0853 1835 MobiDBLite consensus disorder prediction 942 961 - -
Prci12g0853 1835 MobiDBLite consensus disorder prediction 763 788 - -
Prci12g0853 1835 MobiDBLite consensus disorder prediction 1064 1083 - -
Prci12g0853 1835 ProSiteProfiles MI domain profile. 1647 1771 IPR003891 -
Prci12g0853 1835 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 352 1834 IPR045208 GO:0003743
Prci12g0853 1835 MobiDBLite consensus disorder prediction 1498 1512 - -
Prci12g0853 1835 MobiDBLite consensus disorder prediction 873 890 - -
Prci12g0853 1835 MobiDBLite consensus disorder prediction 789 858 - -
Prci12g0853 1835 MobiDBLite consensus disorder prediction 521 576 - -
Prci12g0853 1835 Gene3D - 1641 1835 - -
Prci12g0853 1835 FunFam Eukaryotic translation initiation factor 4G 1641 1834 - -
Prci12g0853 1835 MobiDBLite consensus disorder prediction 592 615 - -
Prci12g0853 1835 MobiDBLite consensus disorder prediction 73 122 - -
Prci12g0853 1835 Pfam MA3 domain 1652 1761 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0853 Prci-Chr12 9527285 9536060 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0853 1 1834 Eukaryotic Initiation Factors Gene Family AT3G60240 43.803 0.0 1219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0853 K03260 - gmx:100796636 2115.5