Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0850 ATGTCCTTCAATCAATCAAGGTCCGATAAGAGCGACAATCATTACCGTAAATCCTGGAGATCAGGGAGCTTCAATCAGCAGCGAGGTTCCTCAGGCACGCACGTTAAGGGTGGTGGCGGCGGGGCCGCGCCTTCTGCCGTGATCACTTCGGGTTCCTCACAGCCCTCTAATCGGAGTTTTAAGAGGTCTAACAATTCACATGGTGGGCAATCTAGGGTAAACCCTCCCCCTGTAAATTCAGCCGAGTCTAATGGTGCTTCTACAGGCCGGACGATACCAAATGGTGCCCATTCACAACAATCACCTGGAGCATCTGATGCGCCAGTTACGAATGCAGTTGCCAAGTCATCTGAGCCCTCATCCATACAGAAGAGCACCAGAGTTGTTCCGAAAGCTCCAACCCCTGGACCTTCCACCGTGAATTCTGATGCAGCAGCTCCTACGACCCCTGCCAAGGCCCCTGAAGATTCATCCAAGCCATTTGCTTTCCAATTTGGATCCATTAGTCCCGGTTTCATGAATGGGATTTCTATTCCTGCTCGCACAAGCTCAGCTCCTCCAAATTTGGACGAACAGAAAAGAGATCAGGCTTGTCACGATTCTTTTAGACCTGTGCCTTCAGTGCCAACACCTCCAAAGCAGCTACCACCAAGGAATGATGGTGTTGTTACTGACCAATCTAATGCTGGGGAGGCTCGTTCAGTGAACAAGGTGAAAAAGGAGGAGCAGGTGTTAGCTTTGCCCCCAGCAAGCCAGGTGCAGAAGCCTTCTGTTGCCATGACTGGGATTTCAATGGCTATGCCATATCATCACCAATCACAGGCCCCTGTACAGTTTGGTGGACCTAATCCACAGATTCAATCTCAGGGAATGCCACCAGCATCTCTTCAGATACCGATCCCTTTAGCAATGGGAAATGTTGCACAAGTACAACCGCAGGTTTTTTTTCCAAGTCTTCAAACTCTTCCTACTCATCCTCAGGGAATTATGCATCAAGGCCAAAACTTGAGTTTCCCTCCGCAAATGGGTCCTCAGATGTCCCATCAGTTGGGTAACATGGGTATGAACATCAACCCACAATATACCCAGCAGCAAGGTGGAAAATTTGCTGGTCCTCGCAAGGCTACTACTGTCAGGATTACTCATCCTGAGACACATGAAGAGCTCAGACTTGACAATGATAAAAAGTCAGATTCACATTCCGATGGCATGTCATCTGGTGCTAGGAATTATCCTAATGTTCCTTCTCAGTCTCAACCCGTTCAATCGTTTGCCACTTCTCATCCCCTCAACTATTTTCCATCTAGCACTTACAGCAGTGGCTCTCTCTTTTTTCCACCTAGTTCTGTTCCATTATCAAGCAGCCATATAACTCCTAATTCTCAGCAACCAAGATTTAATTATCCTGTGAATCAGGGCCCCCAAAATGGAGGTTTTAACAATCCATTATCTATTGGTTCCTTGCCTGTTAGTAAAACTGGCACTTTTGTTCCAGGCTTTGGTGAAACACCAAATTTGGAACATTCTCGTGATTCACAGAAGGTGATATCATCAGGTATGTCTGGAGTAGCTCATGCTAGTATCAAACCAAGTGGCAGTTCTGGTATCGTTGACTCAACAATCACCAATTCTGGCATTTCTGTTAAAACAAGTGAATCTCCCGGCTATTTAGGCGCATCGATTGATGCTGGCTCCACTGTGTCTCCAAAAGTGTCTGATAATTTTTCTGAGACCTCTTCACAGCAGTCTAAGCCGTCCAGTGATTCTTTTGTTTCAAGGTCATTGTCAAAACAACCTGCTGCTGGTTCTGCTGAGAAGCTTGCATCCACTCCCTTGATGCCTTTTTCTGCTGCTGTGAGTGAGAACTCTGTCTCAGTTGTGTCCAACAACGAAGGCAGAAAGAAGGAATCTCTTAGCAGGTCAAACTCTTTGAAAGATAATCAGAAGAAAACAGGGAAGAGAGGCCAATCACAACATCAGGTTACTTCACAATCTCCTACAGTGGTTAATGTACCTTCTCAAGCTGTTGATAGTGTTATGGTTGATCGTGAAGTTTCTGATACTTCGGAAAAAAAAACAAAGGCTTGTGTAGCAACAACCCGTGATGATAACTCTAACAGCACACCACAGGCATTATCAGCCACAGTTAGCAGTGATATTTTTCCTTGTGCCAATGAAATGAACATTGATCCTTCTTTGGAAGGTTCTGTCCGCATTTCAGCTGAAGGAGTTGGTGCTTTAGCTATTGATAGTTTGAACAACCACAGGAATGATAAACTAGAATCATCACAACAGGATAAACTTTTAAAGATGAATATACTTGAGGTGGGTGATAAAAATGAAAGATCCTGTGAAGTATTTAAACAAAAAAGCGATGACATTGGAACTAAGTTTAAACAAACAGAAACAGATGGGGCTAAGGAATCGCAAGTGCAACAAAGACTGGAATCGCAGGATGAATCTACGAATTTTAGATCAGAATGTGACATAAAGGGTGATAATTTAGGCGTGCCTACCTCAAATGATTTGGATTCTAGAGATATCTATTTAAATAGAAATGATAGTACGGTTAGTAATGAATCTATTTGTGCAAATTCTGCCTCGACTGATAAGAATTCTGGTGATCTCCCAGAAGCAACTTCAAAACATAGCAAGGATTGTTCAGAGAATGCAGACAGTGGCTCCGTATTCCTTCCAACATCAATTAGCAAGGACAGACCTATTTTGGAGCCAAATAAGGTGAAAACTACAACAAAAGGAAAGAAGAAAAGAAGGGAGATTCTTCAGAAAGCAGATGCTGCGGGGTCAACTGCTGATCTTTATAATGCATACAAGAGACCCGAGGAAAAGAAAGAAGTCATTGTATGTACAGAGAGCAAAGAAAGTACTTCATCTGGAAGTTTAAAGCAGTTGCCTAAAGAGGCTGCTCAGCCAGATGCTATTGCAACTGAGAAAGATGGGCATGATAAAGCTGAGCCTGCTGATTGGGAGGATGCTGCTGATATGTCTTCCCCAAAATTGGAAGTTGCGGAAAAAACACAACAGGTCAGTGATGGAAATGAACTAGCAGGTAAAAAATACTCAAGGGATTTCCTTATGAAATTTGAAGAGCAATGCATTGATCTTCCTGCGGATTTTAAAATAGAAGACATTCCTGAGGGTTTGATGAATTCTAATGTTACTGGTTCTCATTTTGAACGTGATTCACATCTTAGTCCAGGAAGAATTATGGATAGGTCTGGTGGGATGTCTCGAATGGACCGCCGTGGCTCCGGGCATTTTGAAGAAGACCGGTGGAATAAAGTTGCTGGACGTGACATGCGCATGGATGGTTTTGGTGGTAATACAGGATTTCGACATGGTCAAGGAGGCAATTTTGGTGTTTTAAGGAATCCACGTGCTCAGACACCTCTGCAATATGCTGGAGGGATCCTTTCTGGACCAATGCAATCCATGGGTAATCAGGGAATTATGCAAAAGAATAGCCCTGATGGTGAGAGATGGCAACGAGCAACTAACTACCAGCAGAGGGGTTTAATTCCTTCTCCTCAAACCCCACTGCAGATGATGCATAAAGCTGAAAAGAAGTATGAGGTTGGTAAGGTGACAGATGAGGAGCAAGCAAAGCAGAGGCAGTTGAAAGCCATTTTGAACAAGTTAACTCCTCAGAATTTTGAGAAACTTTTTGAGCAGGTAAAAGCAGTTAACATTGACAATGCCGGCACTCTTACTCGTGTAATCTCTCAAATATTTGAGAAAGCTCTAATGGAGCCTACCTTCTGTGAAATGTATGCCGATTTCTGTTTTCATCTAGCTGCCGAGTTGCCTGATTTCAGTGAAGACGAGGAAAAGATAACTTTTAAGAGATTATTGTTAAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAGGCTAATAAGGATGATGATGGTGAGGTGAAGCAATCCAATGAAGAGAGGGAAGAGAAACGAATTAAGGCAAGAAGACGCATGTTAGGTAATATACGATTGATTGGAGAGTTATATAAGAAAAAAATGTTGACGGAGAGGATAATGCATGAGTGCATCCAGAAGTTACTGGGATCATATCAGGACCCTGATGAGGAAGATATTGAAGCCTTGTGCAAGCTGATGAGTACTATAGGGGTGATAATTGATCATCCCAAAGCCAAGGAACACATTGATGCTTATTTTGAAAGGATGAAATTGTTATCAAACAACATGAATTTATCTTCTCGAGTTAGATTCATGTTGAAGGATGCTATTGATCTGAGAAAGAACAAATGGCAGCAGAAGCGGAAAGTTGAAGGTCCAAAGAAGATTGAAGAGGTGCACAGAGATGCTGCCCAAGAGAGGCAGGCCCAAACTGGTAGGGTAGGCCGTGGTCCAAGCAATACTGCATCATTGAGAAGGATGCCTATGGATTTTAGTCTGAGAGGGTCATCTATGTTGTCTCCACCCATCACCCCTATGGGGCTACGTGGGCTTTCTGCGCAAGTTCGCAGTGGTGGTTCTCAGGATGTTCGTCAAGATGATAGACTATCCTATGAGGCTAGAAATTTGTCCATTCCTTTGCCTCAAAGACCTTTAGCTGATGATTCTATAACCTTGGGACCACAAGGTGGTCTTGCAAGAGGAATGTCCTTTAGGGGGCCAGCTGCTATTCCAAGTTCTCCTGTTCCTGATGGGCTTCCAGTTGCTGCAGATTCTCGTAGAATGACGTCTGGCCCTAATGGTTATAGCAATTCATCGGAGCGTGCTCTGTACAGCAGCAGAGAGGATCAAACGCCAAGATATGCTACAGATAGATTTGCTAGTGCAACTGCTCATGACCAATCAGCTGTTCAGGAGCGTAATATCAGTTATGGTAATAGGGATCTGAGAAATGCAGATAGGAGTCTTGAGAGACCTGTTGCAACTTTACCTCCTGGTGTGCAAGGATCTGCAGTCTCCAAGAATGCCTCGTTAGAGAAGGTTTGGCCGGAAGAACAACTGCGGGACATGTCCATGGCAGCAATTAAAGAATACTACAGTGCTAGAGATGTAAAAGAAGTTGCGCTGTGTGTGAAAGATCTAAACTCTCCGAGCTATCATCCTTCAATGATTTCTCAATGGGTCATAGACTCGTTTGAGAGAAAGGACACGGAAAGAGATCTTCTGGCCAAATTACTAGTGAGCCTTACAAAGTCTCAGGATGGCACCTTGAGTCAGTCTCAGCTTATCCAAGGGTTTGAATATGTTCTAAGTGGCCTGCAAGATGCCGTTAACGATGCCCCCAGAGCCCCAGAATTTCTAGGCCGAGTTTTTGCCAGAGTTGTGACAGAAAGCGTTGTTTCTTTGAAAGATATTGGTCGACTATTACACGAAGGCGGAGAGGAGCCAGGCCAACTCTTGGAAATTGGACTGGCAGCAGATGTTCTGGGAAGCACCTTGGAGGCAATACAAATGGAGAAAGGGGATGCAGTTCTGAGTGAGATCCGTTCAAACTCCAACTTGAGGCTGGAGACTTTCCGGCCACTCAATTCCAATGTATCAAGAAAGTTAGAAAAATATATTTAG 5571 0.44 MSFNQSRSDKSDNHYRKSWRSGSFNQQRGSSGTHVKGGGGGAAPSAVITSGSSQPSNRSFKRSNNSHGGQSRVNPPPVNSAESNGASTGRTIPNGAHSQQSPGASDAPVTNAVAKSSEPSSIQKSTRVVPKAPTPGPSTVNSDAAAPTTPAKAPEDSSKPFAFQFGSISPGFMNGISIPARTSSAPPNLDEQKRDQACHDSFRPVPSVPTPPKQLPPRNDGVVTDQSNAGEARSVNKVKKEEQVLALPPASQVQKPSVAMTGISMAMPYHHQSQAPVQFGGPNPQIQSQGMPPASLQIPIPLAMGNVAQVQPQVFFPSLQTLPTHPQGIMHQGQNLSFPPQMGPQMSHQLGNMGMNINPQYTQQQGGKFAGPRKATTVRITHPETHEELRLDNDKKSDSHSDGMSSGARNYPNVPSQSQPVQSFATSHPLNYFPSSTYSSGSLFFPPSSVPLSSSHITPNSQQPRFNYPVNQGPQNGGFNNPLSIGSLPVSKTGTFVPGFGETPNLEHSRDSQKVISSGMSGVAHASIKPSGSSGIVDSTITNSGISVKTSESPGYLGASIDAGSTVSPKVSDNFSETSSQQSKPSSDSFVSRSLSKQPAAGSAEKLASTPLMPFSAAVSENSVSVVSNNEGRKKESLSRSNSLKDNQKKTGKRGQSQHQVTSQSPTVVNVPSQAVDSVMVDREVSDTSEKKTKACVATTRDDNSNSTPQALSATVSSDIFPCANEMNIDPSLEGSVRISAEGVGALAIDSLNNHRNDKLESSQQDKLLKMNILEVGDKNERSCEVFKQKSDDIGTKFKQTETDGAKESQVQQRLESQDESTNFRSECDIKGDNLGVPTSNDLDSRDIYLNRNDSTVSNESICANSASTDKNSGDLPEATSKHSKDCSENADSGSVFLPTSISKDRPILEPNKVKTTTKGKKKRREILQKADAAGSTADLYNAYKRPEEKKEVIVCTESKESTSSGSLKQLPKEAAQPDAIATEKDGHDKAEPADWEDAADMSSPKLEVAEKTQQVSDGNELAGKKYSRDFLMKFEEQCIDLPADFKIEDIPEGLMNSNVTGSHFERDSHLSPGRIMDRSGGMSRMDRRGSGHFEEDRWNKVAGRDMRMDGFGGNTGFRHGQGGNFGVLRNPRAQTPLQYAGGILSGPMQSMGNQGIMQKNSPDGERWQRATNYQQRGLIPSPQTPLQMMHKAEKKYEVGKVTDEEQAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNAGTLTRVISQIFEKALMEPTFCEMYADFCFHLAAELPDFSEDEEKITFKRLLLNKCQEEFERGEREQEEANKDDDGEVKQSNEEREEKRIKARRRMLGNIRLIGELYKKKMLTERIMHECIQKLLGSYQDPDEEDIEALCKLMSTIGVIIDHPKAKEHIDAYFERMKLLSNNMNLSSRVRFMLKDAIDLRKNKWQQKRKVEGPKKIEEVHRDAAQERQAQTGRVGRGPSNTASLRRMPMDFSLRGSSMLSPPITPMGLRGLSAQVRSGGSQDVRQDDRLSYEARNLSIPLPQRPLADDSITLGPQGGLARGMSFRGPAAIPSSPVPDGLPVAADSRRMTSGPNGYSNSSERALYSSREDQTPRYATDRFASATAHDQSAVQERNISYGNRDLRNADRSLERPVATLPPGVQGSAVSKNASLEKVWPEEQLRDMSMAAIKEYYSARDVKEVALCVKDLNSPSYHPSMISQWVIDSFERKDTERDLLAKLLVSLTKSQDGTLSQSQLIQGFEYVLSGLQDAVNDAPRAPEFLGRVFARVVTESVVSLKDIGRLLHEGGEEPGQLLEIGLAADVLGSTLEAIQMEKGDAVLSEIRSNSNLRLETFRPLNSNVSRKLEKYI 1856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0850 1856 Gene3D - 1210 1445 - -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 797 845 - -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 1534 1632 - -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 958 1004 - -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 805 819 - -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 1578 1594 - -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 861 875 - -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 1610 1627 - -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 568 597 - -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 360 423 - -
Prci12g0850 1856 SUPERFAMILY ARM repeat 1204 1434 IPR016024 -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 379 402 - -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 46 128 - -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 1301 1329 - -
Prci12g0850 1856 ProSiteProfiles MI domain profile. 1668 1792 IPR003891 -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 176 190 - -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 500 537 - -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 403 423 - -
Prci12g0850 1856 Gene3D - 1662 1856 - -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 18 33 - -
Prci12g0850 1856 Pfam MA3 domain 1673 1781 IPR003891 -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 1437 1456 - -
Prci12g0850 1856 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 831 1853 IPR045208 GO:0003743
Prci12g0850 1856 MobiDBLite consensus disorder prediction 654 674 - -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 683 698 - -
Prci12g0850 1856 Coils Coil 1292 1312 - -
Prci12g0850 1856 SMART ma3_7 1669 1783 IPR003891 -
Prci12g0850 1856 SMART if4_15 1210 1432 IPR003890 GO:0003723|GO:0005515
Prci12g0850 1856 FunFam Eukaryotic translation initiation factor 4G 1662 1855 - -
Prci12g0850 1856 SUPERFAMILY ARM repeat 1664 1854 IPR016024 -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 633 653 - -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 979 1004 - -
Prci12g0850 1856 Pfam MIF4G domain 1210 1432 IPR003890 GO:0003723|GO:0005515
Prci12g0850 1856 MobiDBLite consensus disorder prediction 1437 1474 - -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 624 711 - -
Prci12g0850 1856 FunFam Eukaryotic translation initiation factor 4G 1210 1445 - -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 1 222 - -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 1060 1092 - -
Prci12g0850 1856 MobiDBLite consensus disorder prediction 861 925 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0850 Prci-Chr12 9467404 9476300 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0850 1 1855 Eukaryotic Initiation Factors Gene Family AT3G60240 44.480 0.0 1248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0850 K03260 - gmx:100790680 2209.11