Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0849 ATGTCCTTCAATCAATCAAGGTCCGATAAGAGCGACAATCATTACCGTAAATCCTGGAGATCAGGGAGCTTCAATCAGCAGCGAGGTTCCTCAGGCACGCACGTTAAGGGTGGTGGCGGCGGGGCCGCGCCTTCTGCCGTGATCACTTCGGGTTCCTCACAGCCCTCTAATCGGAGGGTAAACCCTCCCCCTGTAAATTCAGCCGAGTCTAATGGTGCTTCTACAGGCCGGACGATACCAAATGGTGCCCATTCACAACAATCACCTGGAGCATCTGATGCGCCAGTTACGAATGCAGTTGCCAAGTCATCTGAGCCCTCATCCATACAGAAGAGCACCAGAGTTGTTCCGAAAGCTCCAACCCCTGGACCTTCCACCGTGAATTCTGATGCAGCAGCTCCTACGACCCCTGCCAAGGCCCCTGAAGATTCATCCAAGCCATTTGCTTTCCAATTTGGATCCATTAGTCCCGGTTTCATGAATGGGATTTCTATTCCTGCTCGCACAAGCTCAGCTCCTCCAAATTTGGACGAACAGAAAAGAGATCAGGCTTGTCACGATTCTTTTAGACCTGTGCCTTCAGTGCCAACACCTCCAAAGCAGCTACCACCAAGGAATGATGGTGTTGTTACTGACCAATCTAATGCTGGGGAGGCTCGTTCAGTGAACAAGGTGAAAAAGGAGGAGCAGGTGTTAGCTTTGCCCCCAGCAAGCCAGGTGCAGAAGCCTTCTGTTGCCATGACTGGGATTTCAATGGCTATGCCATATCATCACCAATCACAGGCCCCTGTACAGTTTGGTGGACCTAATCCACAGATTCAATCTCAGGGAATGCCACCAGCATCTCTTCAGATACCGATCCCTTTAGCAATGGGAAATGTTGCACAAGTACAACCGCAGGTTTTTTTTCCAAGTCTTCAAACTCTTCCTACTCATCCTCAGGGAATTATGCATCAAGGCCAAAACTTGAGTTTCCCTCCGCAAATGGGTCCTCAGATGTCCCATCAGTTGGGTAACATGGGTATGAACATCAACCCACAATATACCCAGCAGCAAGGTGGAAAATTTGCTGGTCCTCGCAAGGCTACTACTGTCAGGATTACTCATCCTGAGACACATGAAGAGCTCAGACTTGACAATGATAAAAAGTCAGATTCACATTCCGATGGCATGTCATCTGGTGCTAGGAATTATCCTAATGTTCCTTCTCAGTCTCAACCCGTTCAATCGTTTGCCACTTCTCATCCCCTCAACTATTTTCCATCTAGCACTTACAGCAGTGGCTCTCTCTTTTTTCCACCTAGTTCTGTTCCATTATCAAGCAGCCATATAACTCCTAATTCTCAGCAACCAAGATTTAATTATCCTGTGAATCAGGGCCCCCAAAATGGAGGTTTTAACAATCCATTATCTATTGGTTCCTTGCCTGTTAGTAAAACTGGCACTTTTGTTCCAGGCTTTGGTGAAACACCAAATTTGGAACATTCTCGTGATTCACAGAAGGTGATATCATCAGGTATGTCTGGAGTAGCTCATGCTAGTATCAAACCAAGTGGCAGTTCTGGTATCGTTGACTCAACAATCACCAATTCTGGCATTTCTGTTAAAACAAGTGAATCTCCCGGCTATTTAGGCGCATCGATTGATGCTGGCTCCACTGTGTCTCCAAAAGTGTCTGATAATTTTTCTGAGACCTCTTCACAGCAGTCTAAGCCGTCCAGTGATTCTTTTGTTTCAAGGTCATTGTCAAAACAACCTGCTGCTGGTTCTGCTGAGAAGCTTGCATCCACTCCCTTGATGCCTTTTTCTGCTGCTGTGAGTGAGAACTCTGTCTCAGTTGTGTCCAACAACGAAGGCAGAAAGAAGGAATCTCTTAGCAGGTCAAACTCTTTGAAAGATAATCAGAAGAAAACAGGGAAGAGAGGCCAATCACAACATCAGGTTACTTCACAATCTCCTACAGTGGTTAATGTACCTTCTCAAGCTGTTGATAGTGTTATGGTTGATCGTGAAGTTTCTGATACTTCGGAAAAAAAAACAAAGGCTTGTGTAGCAACAACCCGTGATGATAACTCTAACAGCACACCACAGGCATTATCAGCCACAGTTAGCAGTGATATTTTTCCTTGTGCCAATGAAATGAACATTGATCCTTCTTTGGAAGGTTCTGTCCGCATTTCAGCTGAAGGAGTTGGTGCTTTAGCTATTGATAGTTTGAACAACCACAGGAATGATAAACTAGAATCATCACAACAGGATAAACTTTTAAAGATGAATATACTTGAGGTGGGTGATAAAAATGAAAGATCCTGTGAAGTATTTAAACAAAAAAGCGATGACATTGGAACTAAGTTTAAACAAACAGAAACAGATGGGGCTAAGGAATCGCAAGTGCAACAAAGACTGGAATCGCAGGATGAATCTACGAATTTTAGATCAGAATGTGACATAAAGGGTGATAATTTAGGCGTGCCTACCTCAAATGATTTGGATTCTAGAGATATCTATTTAAATAGAAATGATAGTACGGTTAGTAATGAATCTATTTGTGCAAATTCTGCCTCGACTGATAAGAATTCTGGTGATCTCCCAGAAGCAACTTCAAAACATAGCAAGGATTGTTCAGAGAATGCAGACAGTGGCTCCGTATTCCTTCCAACATCAATTAGCAAGGACAGACCTATTTTGGAGCCAAATAAGGTGAAAACTACAACAAAAGGAAAGAAGAAAAGAAGGGAGATTCTTCAGAAAGCAGATGCTGCGGGGTCAACTGCTGATCTTTATAATGCATACAAGAGACCCGAGGAAAAGAAAGAAGTCATTGTATGTACAGAGAGCAAAGAAAGTACTTCATCTGGAAGTTTAAAGCAGTTGCCTAAAGAGGCTGCTCAGCCAGATGCTATTGCAACTGAGAAAGATGGGCATGATAAAGCTGAGCCTGCTGATTGGGAGGATGCTGCTGATATGTCTTCCCCAAAATTGGAAGTTGCGGAAAAAACACAACAGGTCAGTGATGGAAATGAACTAGCAGGTAAAAAATACTCAAGGGATTTCCTTATGAAATTTGAAGAGCAATGCATTGATCTTCCTGCGGATTTTAAAATAGAAGACATTCCTGAGGGTTTGATGAATTCTAATGTTACTGGTTCTCATTTTGAACGTGATTCACATCTTAGTCCAGGAAGAATTATGGATAGGTCTGGTGGGATGTCTCGAATGGACCGCCGTGGCTCCGGGCATTTTGAAGAAGACCGGTGGAATAAAGTTGCTGGACGTGACATGCGCATGGATGGTTTTGGTGGTAATACAGGATTTCGACATGGTCAAGGAGGCAATTTTGGTGTTTTAAGGAATCCACGTGCTCAGACACCTCTGCAATATGCTGGAGGGATCCTTTCTGGACCAATGCAATCCATGGGTAATCAGGGAATTATGCAAAAGAATAGCCCTGATGGTGAGAGATGGCAACGAGCAACTAACTACCAGCAGAGGGGTTTAATTCCTTCTCCTCAAACCCCACTGCAGATGATGCATAAAGCTGAAAAGAAGTATGAGGTTGGTAAGGTGACAGATGAGGAGCAAGCAAAGCAGAGGCAGTTGAAAGCCATTTTGAACAAGTTAACTCCTCAGAATTTTGAGAAACTTTTTGAGCAGGTAAAAGCAGTTAACATTGACAATGCCGGCACTCTTACTCGTGTAATCTCTCAAATATTTGAGAAAGCTCTAATGGAGCCTACCTTCTGTGAAATGTATGCCGATTTCTGTTTTCATCTAGCTGCCGAGTTGCCTGATTTCAGTGAAGACGAGGAAAAGATAACTTTTAAGAGATTATTGTTAAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAGGCTAATAAGGATGATGATGGTGAGGTGAAGCAATCCAATGAAGAGAGGGAAGAGAAACGAATTAAGGCAAGAAGACGCATGTTAGGTAATATACGATTGATTGGAGAGTTATATAAGAAAAAAATGTTGACGGAGAGGATAATGCATGAGTGCATCCAGAAGTTACTGGGATCATATCAGGACCCTGATGAGGAAGATATTGAAGCCTTGTGCAAGCTGATGAGTACTATAGGGGTGATAATTGATCATCCCAAAGCCAAGGAACACATTGATGCTTATTTTGAAAGGATGAAATTGTTATCAAACAACATGAATTTATCTTCTCGAGTTAGATTCATGTTGAAGGATGCTATTGATCTGAGAAAGAACAAATGGCAGCAGAAGCGGAAAGTTGAAGGTCCAAAGAAGATTGAAGAGGTGCACAGAGATGCTGCCCAAGAGAGGCAGGCCCAAACTGGTAGGGTAGGCCGTGGTCCAAGCAATACTGCATCATTGAGAAGGATGCCTATGGATTTTAGTCTGAGAGGGTCATCTATGTTGTCTCCACCCATCACCCCTATGGGGCTACGTGGGCTTTCTGCGCAAGTTCGCAGTGGTGGTTCTCAGGATGTTCGTCAAGATGATAGACTATCCTATGAGGCTAGAAATTTGTCCATTCCTTTGCCTCAAAGACCTTTAGCTGATGATTCTATAACCTTGGGACCACAAGGTGGTCTTGCAAGAGGAATGTCCTTTAGGGGGCCAGCTGCTATTCCAAGTTCTCCTGTTCCTGATGGGCTTCCAGTTGCTGCAGATTCTCGTAGAATGACGTCTGGCCCTAATGGTTATAGCAATTCATCGGAGCGTGCTCTGTACAGCAGCAGAGAGGATCAAACGCCAAGATATGCTACAGATAGATTTGCTAGTGCAACTGCTCATGACCAATCAGCTGTTCAGGAGCGTAATATCAGTTATGGTAATAGGGATCTGAGAAATGCAGATAGGAGTCTTGAGAGACCTGTTGCAACTTTACCTCCTGGTGTGCAAGGATCTGCAGTCTCCAAGAATGCCTCGTTAGAGAAGGTTTGGCCGGAAGAACAACTGCGGGACATGTCCATGGCAGCAATTAAAGAATACTACAGTGCTAGAGATGTAAAAGAAGTTGCGCTGTGTGTGAAAGATCTAAACTCTCCGAGCTATCATCCTTCAATGATTTCTCAATGGGTCATAGACTCGTTTGAGAGAAAGGACACGGAAAGAGATCTTCTGGCCAAATTACTAGTGAGCCTTACAAAGTCTCAGGATGGCACCTTGAGTCAGTCTCAGCTTATCCAAGGGTTTGAATATGTTCTAAGTGGCCTGCAAGATGCCGTTAACGATGCCCCCAGAGCCCCAGAATTTCTAGGCCGAGTTTTTGCCAGAGTTGTGACAGAAAGCGTTGTTTCTTTGAAAGATATTGGTCGACTATTACACGAAGGCGGAGAGGAGCCAGGCCAACTCTTGGAAATTGGACTGGCAGCAGATGTTCTGGGAAGCACCTTGGAGGCAATACAAATGGAGAAAGGGGATGCAGTTCTGAGTGAGATCCGTTCAAACTCCAACTTGAGGCTGGAGACTTTCCGGCCACTCAATTCCAATGTATCAAGAAAGTTAGAAAAATATATTTAG 5532 0.4403 MSFNQSRSDKSDNHYRKSWRSGSFNQQRGSSGTHVKGGGGGAAPSAVITSGSSQPSNRRVNPPPVNSAESNGASTGRTIPNGAHSQQSPGASDAPVTNAVAKSSEPSSIQKSTRVVPKAPTPGPSTVNSDAAAPTTPAKAPEDSSKPFAFQFGSISPGFMNGISIPARTSSAPPNLDEQKRDQACHDSFRPVPSVPTPPKQLPPRNDGVVTDQSNAGEARSVNKVKKEEQVLALPPASQVQKPSVAMTGISMAMPYHHQSQAPVQFGGPNPQIQSQGMPPASLQIPIPLAMGNVAQVQPQVFFPSLQTLPTHPQGIMHQGQNLSFPPQMGPQMSHQLGNMGMNINPQYTQQQGGKFAGPRKATTVRITHPETHEELRLDNDKKSDSHSDGMSSGARNYPNVPSQSQPVQSFATSHPLNYFPSSTYSSGSLFFPPSSVPLSSSHITPNSQQPRFNYPVNQGPQNGGFNNPLSIGSLPVSKTGTFVPGFGETPNLEHSRDSQKVISSGMSGVAHASIKPSGSSGIVDSTITNSGISVKTSESPGYLGASIDAGSTVSPKVSDNFSETSSQQSKPSSDSFVSRSLSKQPAAGSAEKLASTPLMPFSAAVSENSVSVVSNNEGRKKESLSRSNSLKDNQKKTGKRGQSQHQVTSQSPTVVNVPSQAVDSVMVDREVSDTSEKKTKACVATTRDDNSNSTPQALSATVSSDIFPCANEMNIDPSLEGSVRISAEGVGALAIDSLNNHRNDKLESSQQDKLLKMNILEVGDKNERSCEVFKQKSDDIGTKFKQTETDGAKESQVQQRLESQDESTNFRSECDIKGDNLGVPTSNDLDSRDIYLNRNDSTVSNESICANSASTDKNSGDLPEATSKHSKDCSENADSGSVFLPTSISKDRPILEPNKVKTTTKGKKKRREILQKADAAGSTADLYNAYKRPEEKKEVIVCTESKESTSSGSLKQLPKEAAQPDAIATEKDGHDKAEPADWEDAADMSSPKLEVAEKTQQVSDGNELAGKKYSRDFLMKFEEQCIDLPADFKIEDIPEGLMNSNVTGSHFERDSHLSPGRIMDRSGGMSRMDRRGSGHFEEDRWNKVAGRDMRMDGFGGNTGFRHGQGGNFGVLRNPRAQTPLQYAGGILSGPMQSMGNQGIMQKNSPDGERWQRATNYQQRGLIPSPQTPLQMMHKAEKKYEVGKVTDEEQAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNAGTLTRVISQIFEKALMEPTFCEMYADFCFHLAAELPDFSEDEEKITFKRLLLNKCQEEFERGEREQEEANKDDDGEVKQSNEEREEKRIKARRRMLGNIRLIGELYKKKMLTERIMHECIQKLLGSYQDPDEEDIEALCKLMSTIGVIIDHPKAKEHIDAYFERMKLLSNNMNLSSRVRFMLKDAIDLRKNKWQQKRKVEGPKKIEEVHRDAAQERQAQTGRVGRGPSNTASLRRMPMDFSLRGSSMLSPPITPMGLRGLSAQVRSGGSQDVRQDDRLSYEARNLSIPLPQRPLADDSITLGPQGGLARGMSFRGPAAIPSSPVPDGLPVAADSRRMTSGPNGYSNSSERALYSSREDQTPRYATDRFASATAHDQSAVQERNISYGNRDLRNADRSLERPVATLPPGVQGSAVSKNASLEKVWPEEQLRDMSMAAIKEYYSARDVKEVALCVKDLNSPSYHPSMISQWVIDSFERKDTERDLLAKLLVSLTKSQDGTLSQSQLIQGFEYVLSGLQDAVNDAPRAPEFLGRVFARVVTESVVSLKDIGRLLHEGGEEPGQLLEIGLAADVLGSTLEAIQMEKGDAVLSEIRSNSNLRLETFRPLNSNVSRKLEKYI 1843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0849 1843 MobiDBLite consensus disorder prediction 1565 1581 - -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 966 992 - -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 611 698 - -
Prci12g0849 1843 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 340 1840 IPR045208 GO:0003743
Prci12g0849 1843 MobiDBLite consensus disorder prediction 366 389 - -
Prci12g0849 1843 SUPERFAMILY ARM repeat 1651 1841 IPR016024 -
Prci12g0849 1843 Gene3D - 1649 1843 - -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 555 584 - -
Prci12g0849 1843 SMART ma3_7 1656 1770 IPR003891 -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 1288 1316 - -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 1424 1443 - -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 348 410 - -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 163 177 - -
Prci12g0849 1843 Pfam MA3 domain 1660 1768 IPR003891 -
Prci12g0849 1843 Coils Coil 1279 1299 - -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 670 685 - -
Prci12g0849 1843 FunFam Eukaryotic translation initiation factor 4G 1197 1432 - -
Prci12g0849 1843 Gene3D - 1197 1432 - -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 487 524 - -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 18 33 - -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 1 209 - -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 848 912 - -
Prci12g0849 1843 SUPERFAMILY ARM repeat 1191 1421 IPR016024 -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 641 661 - -
Prci12g0849 1843 Pfam MIF4G domain 1197 1419 IPR003890 GO:0003723|GO:0005515
Prci12g0849 1843 MobiDBLite consensus disorder prediction 390 410 - -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 1424 1461 - -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 848 862 - -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 1597 1614 - -
Prci12g0849 1843 FunFam Eukaryotic translation initiation factor 4G 1649 1842 - -
Prci12g0849 1843 ProSiteProfiles MI domain profile. 1655 1779 IPR003891 -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 620 640 - -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 784 833 - -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 1047 1079 - -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 1521 1619 - -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 945 992 - -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 46 115 - -
Prci12g0849 1843 MobiDBLite consensus disorder prediction 792 806 - -
Prci12g0849 1843 SMART if4_15 1197 1419 IPR003890 GO:0003723|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0849 Prci-Chr12 9467404 9476300 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0849 1 1842 Eukaryotic Initiation Factors Gene Family AT3G60240 44.197 0.0 1234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0849 K03260 - gmx:100790680 2189.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g0849 12 9467404 9476300 Prci12g0849 12 9467404 9476300 ECH