Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0845 ATGTATTGCTTTCACTACTTCACGAGGCGCGGGAGGCGGAGGTCATCGGAACCTGATCTTAAAGGAGAATTGAAGTCCCAAAACTCCGAGGTCAATAGAGTCACCAAATCTTCGGCTGCTTCAACCTCATCGCGTGGGATTCCAGAATTGTATGAAGAGAAGGCTCATAATTTGCGTGTTTTCTCCTTCGCTGAACTCCGACAAGCGACAAATAATTTCAGTAGGGTTTTGAAGATTGGTGAAGGAGGGTTTGGGAGTGTATACAAAGGTGAAATCCATGCCCATGGTGGGAATAAGAAGGAGTTTATTTCGGTTGCCATCAAAAGGCTTGACCCTGGTGCGTTCCAGGGTCATAAGCAATGGTTAGCTGAAGTTCAGTTTCTCGGCATTGTGGAGCACCCAAATCTTGTGAAACTCATCGGATATTGTGCTGTGGATGCTGAAAGAGGGATTCAGAGACTGCTTGTATATGAATACATGCCGAATAAAAGCTTGGAATATCATCTTTTTAATAAGGTGTTCGATGCTCTTCCTTGGAAAACAAGACTTGAAATAGCACTTGGAGCAGCACAAGGGTTAGCTTATCTTCACGAAGAATTGGAAGTTCAGGTGATATATAGAGATTTTAAAACCTCAAATGTATTGCTGGACGAAAATTTTAGGCCAAAACTTTCTGATTTCGGACTTGCAAGGCAGGGGCCAATGGCTGGGCACACTCATGTTTCAACTGCTGTAATGGGTACATATGGCTATGCTGCTCCGGATTACATTGAAACAGGCCATCTCACTACAAAGAGTGATGTGTGGAGCTTTGGCGTGGTTCTCTATGAAATTCTTACAGGGAGGCAATCGCTGGATCGAAACAGGCCAAAGGCGGAGCAGAAACTTTTGGAGTGGGTGAAACGGCATCCTGTTAATAGCAAAAGCTTTAGCTTGATAATTGATCCGAGACTTGAAGGAAACTATTCCATCAATAGAGCACGAGATATCGCCAAGCTTGCCGATGATTGCCTGAGTAAAAGCGCAAAAGAGCGACCAAGGATGAGTGAGGTGGTGGAGCGATTGAAGCAGATAATCATTGATTCAGATGAAGACAATCCTGATGAGAAAAATATTAAGCTGTTTGAAAATGATGAATTACTTGATCAAGAAGAAAACCCAAATCAGCCAAACCCTTCGAAGTTGTGGCAAAGGAGGATGGCCCATCTTGCAAAACTTGGTGAACATGTGGATACTGCAATTGGACGAAGATTTATGGTGCTACAAAGTACCAAAGCTGGTTCTTAG 1287 0.4351 MYCFHYFTRRGRRRSSEPDLKGELKSQNSEVNRVTKSSAASTSSRGIPELYEEKAHNLRVFSFAELRQATNNFSRVLKIGEGGFGSVYKGEIHAHGGNKKEFISVAIKRLDPGAFQGHKQWLAEVQFLGIVEHPNLVKLIGYCAVDAERGIQRLLVYEYMPNKSLEYHLFNKVFDALPWKTRLEIALGAAQGLAYLHEELEVQVIYRDFKTSNVLLDENFRPKLSDFGLARQGPMAGHTHVSTAVMGTYGYAAPDYIETGHLTTKSDVWSFGVVLYEILTGRQSLDRNRPKAEQKLLEWVKRHPVNSKSFSLIIDPRLEGNYSINRARDIAKLADDCLSKSAKERPRMSEVVERLKQIIIDSDEDNPDEKNIKLFENDELLDQEENPNQPNPSKLWQRRMAHLAKLGEHVDTAIGRRFMVLQSTKAGS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0845 428 ProSiteProfiles Protein kinase domain profile. 73 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0845 428 PANTHER OS01G0588500 PROTEIN-RELATED 37 358 - -
Prci12g0845 428 SUPERFAMILY Protein kinase-like (PK-like) 55 356 IPR011009 -
Prci12g0845 428 MobiDBLite consensus disorder prediction 27 41 - -
Prci12g0845 428 MobiDBLite consensus disorder prediction 15 41 - -
Prci12g0845 428 Gene3D Phosphorylase Kinase; domain 1 47 159 - -
Prci12g0845 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Prci12g0845 428 ProSitePatterns Protein kinases ATP-binding region signature. 79 108 IPR017441 GO:0005524
Prci12g0845 428 Gene3D Transferase(Phosphotransferase) domain 1 160 380 - -
Prci12g0845 428 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 160 369 - -
Prci12g0845 428 Pfam Protein tyrosine and serine/threonine kinase 78 355 IPR001245 GO:0004672|GO:0006468
Prci12g0845 428 CDD STKc_IRAK 79 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0845 Prci-Chr12 9410126 9413819 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0845 3 355 Glycoside Hydrolase AT3G07070 44.475 2.42e-92 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci12g0845 PK_Tyr_Ser-Thr 3.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0845 - - gmx:100784625 600.127