Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0841 ATGTTAAAAGCTAGTTTGTCAAATAGGTATGACAGAAGAATAAGAGAAATCACTCACTCCATAAAGATATTACTTGATGCAACATACTTGGATATCCCACCACATCTAGTGCGAATTCAACATCGGGTGAAAAAAGCTCTTCATTTGTCCAAATACTACTCAAAAGATATAGCTGTTAGGGAAGAAAATGTGATCATAGTAGGCATATGTGGAGTTGTAGGCATTGGCAAATCAACCATTGCTAGAATTATTTATGATACAATCAGTGGCAATTTTGAGAGCAGTAGTTTTCTTGCAAGTATCAATAAAGTATGGAAGAAAGACAATGGTCAAATTCTTCTCCAGGAACAACTTATTTCAGAAATTTCTAGCACAAAAGTTGAGAATATACATGACACTGAAACTGGAATTAGACAAATAAAGATGGCTCTGCAGAATAGAAGGTCACTTGTAGTGCTTGATGATGTTGACCATATAGACCAACTTGTGACATTGTGTGGAAGCCGAGAATGGTTTGGTTTTGGGAGTATGATCCTCATTACGTCAACAAGTAAGCATATATTAGATCACATTAAAGTCAAATATGTCTATGAAGTGAGGAAAATGGACAAAAGGGAATCTCTTGAACTTCTGAGTTGGCATGCTTTCAAGTTGAGTTGGAATGCTTTCAAGCAATCTAGCCCAAGCAATGATTTCATTAACCTTGCAAAAAATGTCATTCTTCATTGTGAAGGATTACCACTAGTTCTCGAAGTTGTTGGCTCTCTTTTGTATAGGAAGACAACACAAGAATGGGAATGTGTATTGAAGAAATTGAAAAGCATCCCTGCAAGTCAAATACAAGAGAAGATTAAAATAAGTTGTCAGTATTTAGATGACTCGGTGAAAGATTTATTCTTTACTATTGCATACTTTTATGTGGGTGATGAGAAATTGTCTATTGCACAAAAACTAAGTGGCCTTCAATTTCCCTTAGAAATTGGAATAAACACGCTTGTTGAGAGGAGCTTGATAAAAATTGACATGAATAATAGGCTTCATATGCATGAATTGCTGCAAGAGATTGGAAAGGGAATAAACCCTAATAAGCCAAAACCCAAATATAACTATCATGTGTTCTTGAGTTTCTGTGGTGATGATACACGCAAGTCTTTTGCAACTCATCTTCATGATGCATTGAAAAGGGTTGGTCTTGAGGTTTTCATGGATCCTGAAATCAGAAGGGGAGACAATATCTCATCTTCACTGGTCCAGGCAATTGAAAGTTCAAGAATATCAATCATTATCTTTTCAATCAAATATGCAAGCTCAAGCTGGTGCTTGCAAGAACTGGAAAAAATTATGGAATGTCATAGAACTGTTGGACAACAGGTATTACCTATTTTCTTCAGTGTGCAACCATCAGATGTACGGAAGCAATCCGGTGATTTTGGAAGTGAATTCAAAAGGCTCTTGAAAAGGACCTCAGCTAGCAAAGACCAAAAATTCAATTGGACAAGAGCACTCAATGAAGTTGCCAATTTAGCTGGATGGGACTACTCTCATCGTTATGGAACTGAAGCTGAGCTGATTAACTGTGTTATGGACACTGTCACCAAGAACCTTGACGACAACACAAATCTATTTGTCACACATCATCCTGTAGGGCTGAGATCTCGCATGAAGGAAATCATACAAATGTTAAGTGACAAATCAGATGAGATTATGGTGGTGGGAATTCTCGGTATGGGTGGGATTGGCAAAACAACCCTTGCCAAAGCCATTTATAATGAAGTTGGACAATATTTTGAGGCTAAAAGCTTCCTTGCAAACATTAGAGAAGCTTCAGAGCTAGAAAATGGCCTAGTTCGTCTGCAAGAACAACTTTTGTCAAACATTTTACAATCAAGGAGGTTGACACTATATTGCATTGAATCCGGGAAAGCTATAATGAAAGAAAGGCTTTGTGGTAAAAAAGCACTAATCGTACTAGATAGTGTCACCAACATGGCTCAACTTGATGCTCTGTGTGGCAATCGTGAATGGTTTGGTTCAGGTAGTAAAATAATCATTACTACTAGAGACCAACGCGTACTTGATAGCATTAAAGCAGATAATGTATACAAGATGAAAGAAATGGATGGTAATGAATCTCTTGAACTGTTTAGCTGGCATGCATTTAAACAAGCAAGCCCAACAGGAGTTCTTATTGATAGATCAAGAAGTGTTATTGCTTATTGTGAAGGGTTGCCATTAGCTCTTGAAGTTCTTGGTGCTTATCTATTTGATAGACCAATAGAAGCTTGGAAATGTGTTTTGGATAGTCTAAAAGAAATTCCAAATGATCAAATACATAAAAAGCTAAGAATAAGCTTTGATGGTCTTAGTAATGATTTTGAGAAAAATATATTTTTGGATATATGTTGTTTTTTCATTGGAAAGGATAGAAATTATGCTACACAAATATTAGATGGTTGTGGACTTCATGCAGAGATTGGAATTACCCGACTCATAGAGTTGAGCCTCTTAAGAGTTGATAAGAATAATAAGCTTGATATGCATGGCTTAATACGTGACATGGGAAGAGAGATTGTTCGTGAAGAGTCACCAGATGAACCTGGAAATCGTAGCAGATTATGGATTCGAGATAATGGGATTGATGTGTTAAGAAATTGTAGGGGAACAATATCTGTTAAAGGACTAGCACTGAATTTTTCAAGGACAGAAACACAATCTTTTGATGCGAAGGGATTTGAGATGATGAAGAGACTTAGATTACTTCAACTTGGCCATGTAAAACTTAATGGCAATTATGAATATCTATCAAAGGAGTTGCGATGGCTTTGTTGGCATGGATTTCCTTCATGTTGCATGCCCCAAAATTTTTCTCAAGAAAAAGCAGTTGTCATTGACTTAAGATATAGTTATCTAACCCAAGTATTGAAGAATTGCCAGTTATTAGAGAGGTTGAAAGTTCTCAATTTAAGTCATTCTTATGACTTAAGAGAAACGCCTGATTTTTCAAGACTGCCAAATCTTGAAAGGCTAATACTTAAAGATTGTCCACGATTATCTTCAATTCATGAATCTATTGGAGATTTGAAGTTCTTAATATTGGCAAATTTGAAAGGTTGTAAAGATCTCGGTGAGTTGCCAAGAGGTATATATAACTTGAAATCTCTAAAAACTCTCAACCTGTCTGGTTGTTCAAAACTTGAGAAATTAGAAGATGGGATTAACCAAATGGAATCCTTGACAACTCTAATGGCAAATGAAACTTCCATAGCACAAGTTCCCTTGGCATTAGTGAGATCAAGAAGCATCACATATTTGTCAATATGTGGCCATGAAGGATTGCCCAGAGATGTATTTCCAATTCTCATTCGCTCGTGGGTGTCACCAAGAAATAATTCAAGGTCCCTTCAGCATGTATTTGCAAGCATGCCATTTTTATTGCCACATCTTTTTCGTAGTTTATCTCACCTAAGCAGCGGAATATTGAGAAGAAGACCTTATCCATTACATATCTCAGGGGCAACAGCTCTAACATCAATTGGTTTTCATGATCAAGTTGACACTATAGAGACTGCAAATTTCTTGAATTCTTTTATTACTGTACAAGTGGGAGGATTCAGCGAAGTCATTGATGCACTTTTGAAGATTATCTCCCAGGGATGGAGTGATAGAGGGCTTGACTATTATCTCCCTGGAGATAATTACTCTGATTGGCTAGCCTTTGAAGATAAAGGGTCCTCAGTATCATTTAAAGTGACTCAAGTTGTTAGTCGTAGCTTAAAAGGAATGGTCATTTGCAGTTTCTTTTCATCTTTGCAAAATAGCACGGCATCTGTATATCCTGTTGGTTTCATGATAAAGAATTTTACAAAGGCTTCTATTGATTTCTACAAACGAGATTCTGAAACTTCTACATCTGATGAAGAAGAACGGCAGAAGATATTATCTAATTTGGAGCCTGAAAATGAAGTGGAAGTTAGAGTGGATTTTGCTCATAAATATATTGTGAACAAAACTATAGTCTATCTTGTGTACAGTGATCATGATGATGCTGCTGCTGGCAAAAGGGTTGTTGAATAA 4074 0.3655 MLKASLSNRYDRRIREITHSIKILLDATYLDIPPHLVRIQHRVKKALHLSKYYSKDIAVREENVIIVGICGVVGIGKSTIARIIYDTISGNFESSSFLASINKVWKKDNGQILLQEQLISEISSTKVENIHDTETGIRQIKMALQNRRSLVVLDDVDHIDQLVTLCGSREWFGFGSMILITSTSKHILDHIKVKYVYEVRKMDKRESLELLSWHAFKLSWNAFKQSSPSNDFINLAKNVILHCEGLPLVLEVVGSLLYRKTTQEWECVLKKLKSIPASQIQEKIKISCQYLDDSVKDLFFTIAYFYVGDEKLSIAQKLSGLQFPLEIGINTLVERSLIKIDMNNRLHMHELLQEIGKGINPNKPKPKYNYHVFLSFCGDDTRKSFATHLHDALKRVGLEVFMDPEIRRGDNISSSLVQAIESSRISIIIFSIKYASSSWCLQELEKIMECHRTVGQQVLPIFFSVQPSDVRKQSGDFGSEFKRLLKRTSASKDQKFNWTRALNEVANLAGWDYSHRYGTEAELINCVMDTVTKNLDDNTNLFVTHHPVGLRSRMKEIIQMLSDKSDEIMVVGILGMGGIGKTTLAKAIYNEVGQYFEAKSFLANIREASELENGLVRLQEQLLSNILQSRRLTLYCIESGKAIMKERLCGKKALIVLDSVTNMAQLDALCGNREWFGSGSKIIITTRDQRVLDSIKADNVYKMKEMDGNESLELFSWHAFKQASPTGVLIDRSRSVIAYCEGLPLALEVLGAYLFDRPIEAWKCVLDSLKEIPNDQIHKKLRISFDGLSNDFEKNIFLDICCFFIGKDRNYATQILDGCGLHAEIGITRLIELSLLRVDKNNKLDMHGLIRDMGREIVREESPDEPGNRSRLWIRDNGIDVLRNCRGTISVKGLALNFSRTETQSFDAKGFEMMKRLRLLQLGHVKLNGNYEYLSKELRWLCWHGFPSCCMPQNFSQEKAVVIDLRYSYLTQVLKNCQLLERLKVLNLSHSYDLRETPDFSRLPNLERLILKDCPRLSSIHESIGDLKFLILANLKGCKDLGELPRGIYNLKSLKTLNLSGCSKLEKLEDGINQMESLTTLMANETSIAQVPLALVRSRSITYLSICGHEGLPRDVFPILIRSWVSPRNNSRSLQHVFASMPFLLPHLFRSLSHLSSGILRRRPYPLHISGATALTSIGFHDQVDTIETANFLNSFITVQVGGFSEVIDALLKIISQGWSDRGLDYYLPGDNYSDWLAFEDKGSSVSFKVTQVVSRSLKGMVICSFFSSLQNSTASVYPVGFMIKNFTKASIDFYKRDSETSTSDEEERQKILSNLEPENEVEVRVDFAHKYIVNKTIVYLVYSDHDDAAAGKRVVE 1357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0841 1357 Gene3D Ribonuclease Inhibitor 870 1100 IPR032675 -
Prci12g0841 1357 Gene3D - 540 703 IPR027417 -
Prci12g0841 1357 SUPERFAMILY L domain-like 858 1159 - -
Prci12g0841 1357 PRINTS Disease resistance protein signature 740 754 - -
Prci12g0841 1357 PRINTS Disease resistance protein signature 1049 1065 - -
Prci12g0841 1357 PRINTS Disease resistance protein signature 647 661 - -
Prci12g0841 1357 PRINTS Disease resistance protein signature 570 585 - -
Prci12g0841 1357 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 530 800 IPR027417 -
Prci12g0841 1357 SMART AAA_5 63 203 IPR003593 GO:0016887
Prci12g0841 1357 SMART AAA_5 567 707 IPR003593 GO:0016887
Prci12g0841 1357 Gene3D - 706 789 IPR042197 -
Prci12g0841 1357 Gene3D - 201 292 IPR042197 -
Prci12g0841 1357 ProSiteProfiles TIR domain profile. 368 535 IPR000157 GO:0007165
Prci12g0841 1357 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 300 IPR027417 -
Prci12g0841 1357 Pfam TIR domain 369 535 IPR000157 GO:0007165
Prci12g0841 1357 Gene3D - 365 539 IPR035897 -
Prci12g0841 1357 SMART till_3 369 508 IPR000157 GO:0007165
Prci12g0841 1357 FunFam Disease resistance protein (TIR-NBS-LRR class) 366 537 - -
Prci12g0841 1357 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 370 1084 IPR044974 GO:0006952
Prci12g0841 1357 Pfam NB-ARC domain 553 773 IPR002182 GO:0043531
Prci12g0841 1357 Pfam NB-ARC domain 62 283 IPR002182 GO:0043531
Prci12g0841 1357 CDD ABC_ATPase 48 192 - -
Prci12g0841 1357 Gene3D - 29 197 IPR027417 -
Prci12g0841 1357 SUPERFAMILY Toll/Interleukin receptor TIR domain 364 511 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0841 Prci-Chr12 9176895 9183395 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0841 57 378 WRKY Transcription Factor Family AT4G12020 28.358 6.91e-28 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0841 - - pcin:129289060 2647.08