Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0840 ATGGCCGGAAAGGAAGAGGTGAAGCTCTTGGGAATCGTAGGAAGCCCATTTGCAAGCAGAGCAGAGATAGCTCTGAAACTGAAGGAAGTGGAATATGAATACGTTCATGAATCTGTGAACAAGAAAAGTGATCTTCTTCTAAAGTACAATCCAGTTCACAAGCTGGTTCCTGTGCTGATTCACAATGAGAAACCTATTTGTGAGTCACTTGTGATTGTTGAATACATTGATGAGACTTGGAATAATAATGGTCACCCCTTCTTGCCTTCTGATCCTCACCAAAAAGCCTTGGCTCGTTTCTGGTCTAAGTTCATCGATGATAAGGTTACGCCTGCTGTATTTAAAGCAGCATGGAACCCTAATGAGAAAGAGAGAGAGAAGTGTGTTGAAGAATCAATGGATGCTTTGAAGGCCCTAGAAAATGAGGTCAAAGGCAAATTCTTCAATGGAGGTTCAATTGGGCTTGTGGACATAGCTGGTTTGTTTGTGGCTTATTGGCTGCCTGTAGTTCAAGAAGCTGGTGGTCTTGGTTGGTTCAATGGTGAGAAATTTCCAAAGCTTGAGAAATGGAGCTATGAGATTCTGAATCACCCAACAATCAAATTGGCTTTACCTCCCAGAGATGATCTTCTTGCATATGCCAAAACTCAATTTCAAATCATTCATGCTTCAAAGTAA 678 0.4145 MAGKEEVKLLGIVGSPFASRAEIALKLKEVEYEYVHESVNKKSDLLLKYNPVHKLVPVLIHNEKPICESLVIVEYIDETWNNNGHPFLPSDPHQKALARFWSKFIDDKVTPAVFKAAWNPNEKEREKCVEESMDALKALENEVKGKFFNGGSIGLVDIAGLFVAYWLPVVQEAGGLGWFNGEKFPKLEKWSYEILNHPTIKLALPPRDDLLAYAKTQFQIIHASK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0840 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Prci12g0840 225 FunFam Tau class glutathione S-transferase 88 224 - -
Prci12g0840 225 SUPERFAMILY Thioredoxin-like 7 109 IPR036249 -
Prci12g0840 225 Gene3D - 91 225 - -
Prci12g0840 225 Pfam Glutathione S-transferase, C-terminal domain 109 198 IPR004046 -
Prci12g0840 225 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Prci12g0840 225 Gene3D Glutaredoxin 1 90 - -
Prci12g0840 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 209 IPR045073 -
Prci12g0840 225 CDD GST_C_Tau 92 215 IPR045074 GO:0004364|GO:0006749
Prci12g0840 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 218 IPR010987 -
Prci12g0840 225 SUPERFAMILY GST C-terminal domain-like 78 220 IPR036282 -
Prci12g0840 225 CDD GST_N_Tau 7 80 - -
Prci12g0840 225 FunFam Glutathione S-transferase GSTU6 2 88 - -
Prci12g0840 225 SFLD Glutathione Transferase (cytosolic) 4 222 IPR040079 -
Prci12g0840 225 SFLD Main.3: Omega- and Tau-like 4 222 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0840 Prci-Chr12 9158535 9161263 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0840 1 224 Glutathione S-transferase Gene Family AT3G09270 51.327 3.65e-75 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0840 K00799 - gmx:100500680 290.812