Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0838 ATGTTCCGCCGCGCCACTACTTTGCTGGGTCGTCCCCTTCTCGGCGCCAGGTCTCGCCGTTTCTCGACGGATCTCCCTGCCGCTACGGCCGAAGATTCCCAGTTCGTTGGGGCATGGAAGAAGGTCGTTCCTAACTTGGAGCCACCCAAGACTCCACTTGCGTTCATGACCCCTCGCCCTCCTACTCCCTCTTCGATCCCATCCAAGCTCACGGTCAATTTCGTGCTTCCTTACTCTTCGGAATTGTCCGCGAAAGAGGTTGACATGGTCATAGTACCAGCAACAACGGGGCAAATGGGTGTTCTTCCTGGACATGTAGCTACAATTGCAGAGTTGAAGCCTGGCATTCTATCTGTGCATGATGGGAATGATGTGACCAAGTACTTTGTGAGTAGTGGCTTTGCTTTCGTCCATGCGAACTCTGTTGCTGATATAATAGCTGTTGAGGCCGTGCCAGTCGATCAAATTGATGCCAGCCTAGTCCAAAAGGGTCTCCAAGAATTCACTCAGAAGCTGAGCTCTGCCACAACTGATCTGGAGAAAGCTGAAGCTCAGATTGGGATTGATGTCCATAGTGCGCTCAACGCTGCCCTTTCAGGTTGA 603 0.5224 MFRRATTLLGRPLLGARSRRFSTDLPAATAEDSQFVGAWKKVVPNLEPPKTPLAFMTPRPPTPSSIPSKLTVNFVLPYSSELSAKEVDMVIVPATTGQMGVLPGHVATIAELKPGILSVHDGNDVTKYFVSSGFAFVHANSVADIIAVEAVPVDQIDASLVQKGLQEFTQKLSSATTDLEKAEAQIGIDVHSALNAALSG 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0838 200 NCBIfam ATP synthase F1 subunit epsilon 82 188 IPR001469 GO:0015986|GO:0045261|GO:0046933
Prci12g0838 200 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 33 199 IPR001469 GO:0015986|GO:0045261|GO:0046933
Prci12g0838 200 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 70 151 IPR036771 -
Prci12g0838 200 Gene3D - 157 199 - -
Prci12g0838 200 FunFam ATP synthase delta 59 156 - -
Prci12g0838 200 Coils Coil 165 185 - -
Prci12g0838 200 CDD F1-ATPase_delta 70 193 IPR001469 GO:0015986|GO:0045261|GO:0046933
Prci12g0838 200 Hamap ATP synthase epsilon chain [atpC]. 68 188 IPR001469 GO:0015986|GO:0045261|GO:0046933
Prci12g0838 200 Gene3D - 60 156 IPR036771 -
Prci12g0838 200 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 70 142 IPR020546 GO:0015986
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0838 1 200 Primary Pumps ATPases AT5G47030 73.659 1.53e-107 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0838 K02134 - cave:132167725 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g0838 12 9132498 9136788 Prci12g0838 12 9132498 9136788 ECH