Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0809 ATGGCTTGTGTTGAGTTTCAATATTCTGATCTTGTGACACTGTTTTTATTCCAAGCTTTTCATGATCTTATACCATATCTTGTGTTAGCCTTTTGTCTTGTTAATGTGCTTATTTGTTCATCTTCTGGTGTAATATCTGAAATGCTTAAGGTACAAGGAGGAAGTGCAATGAGTAGTGGATTGGGAGATGTGTTTGATTCACATACTAATCACCTTTCATCTACTTATTGTAAGTTCCTCTGCCATTGGGATTGGCTGATTGACTTAGAAGCAAAAGAGACTGAGTTTGTAAAGAAAGAGATGTGGCGATCACATGCTTTTAAAAGTCAGAACAGTACTGGCCTTTCTTCTGTCATCCTTGATGCTTCAAATAATATTCCACATCAGAAATCTCTTAAAGATAATTGTTTCATTTATCGTTTTGTACGATGTGGTCCATCTTCCCTATCTGAAGATGGCGATCCTTCTAAAGCTACAGCAAATTATTTAGATCTGAAACTAAGAAGTGGAGACTATGTGATATTGAGCACTGAATCTAGCCGTCAAGCTATTGCCAGTGGGGTGATTACAGATATTAGTCATGCCCATGTTTCTGTTTCCTTTTCAAAGCGCCTGCGGATTCCTGGAAGCACCTCCACTAGCCAAGATCTCTATAAACAGGTTTGGAGAATTGATAAGGATGAAGGTGTGACTTCATTTGCTATTATGAGGTTTAATCTAGTACAGCTTTTTCTGCAAAATGCTCGAAGTACTCATCTGAGGAAAATGATTGTTGATCTTGAGGCTCCTAAATTTGACAGTGGATCTGTGCTCAGTCAGGACCCAGCAATATCATATGTGTGGTCAGAGAAGAGTTTGAATGATGATCAGCGTAGATCAATCCTCAAGATTCTTACTGCAAAGGACTACGCACTCATATTAGGAATGCCCGGAACAGGAAAGACATCAACTATGGTTCATGCTGTGAAAGCATTATTAATCAGAGGCACAACTATTTTGCTGACAGCTTATACAAACTCAGCTGTAGATAATTTACTTATCAAATTAAAAGCTCAGGGAATTGATTTTGTCCGTATTGGAAGACATGAAGCTGTGCATGAGGAGGTTAGAGGACACTGCCTTTCAGCAACAAATGTACAAAATGTTGATGAGATCAAAGTAAGGTTAGAACAAGTTAAAGTAGTTGCAGTTACATGTCTGGGCATCACCAGTCCCTTGCTTGCCAACAGGACTTTTGATGTATGCGTTATGGACGAAGCTGGGCAGACAACTCTACCAGTGTCCTTGGGCCCTCTCATGTTTTCCTCAATGTTTGTACTTGTGGGTGATCACTATCAACTTCCTCCGCTCGTCCAGAGTGCAGAGGCTCGAGAGAATGGTCTGGGGATAAGTTTATTTTGTAGGCTCTCAGAAGCACATCCACAAGCAATTTCAGCACTACAGAGTCAGTACCGTATGTGTCAGGGCATCATGGACCTGTCAAATGCCTTGATATATGGTGATAGGTTAAGGTGCGGTTCCACTGAGATTGCCAATGCAAAACTTGCGTTTTCTACCTTAAAATGTGCCTTGCCTTGGCTAAAAAATGTTTTGAATCCATGCAGGCCAGTGATATTTATTGATACTGATAAATTGCCCGCTATGGAGGCAAGAGAACAGAAGGCTATAAATAACCCTGTTGAAGCTCACATAATTGTTGAGATAGCTAAGGCACTAATAAAAAATGGAATTGGAGAAGAACATGTTGGCATTATTACTCCCTACAATTCCCAGGCAAACCTCATCCGTCAAGCTGCTTGCATGACATCGTTGGAGATTCATACCATTGACAAATACCAGGGTAGAGATAAAGATTGCATAATAGTATCTTTTGTGAGGTCCAGTGAAAATCCATCAAGCTGTACTTCTTTGCTTGGAGACTGGCACAGGATAAATGTGGCTCTCACACGTGGCAAGAACTCTATCAAAGGTTCCATTACTGAAGCTTCTCATAAAAAAGGTTGA 2004 0.4032 MACVEFQYSDLVTLFLFQAFHDLIPYLVLAFCLVNVLICSSSGVISEMLKVQGGSAMSSGLGDVFDSHTNHLSSTYCKFLCHWDWLIDLEAKETEFVKKEMWRSHAFKSQNSTGLSSVILDASNNIPHQKSLKDNCFIYRFVRCGPSSLSEDGDPSKATANYLDLKLRSGDYVILSTESSRQAIASGVITDISHAHVSVSFSKRLRIPGSTSTSQDLYKQVWRIDKDEGVTSFAIMRFNLVQLFLQNARSTHLRKMIVDLEAPKFDSGSVLSQDPAISYVWSEKSLNDDQRRSILKILTAKDYALILGMPGTGKTSTMVHAVKALLIRGTTILLTAYTNSAVDNLLIKLKAQGIDFVRIGRHEAVHEEVRGHCLSATNVQNVDEIKVRLEQVKVVAVTCLGITSPLLANRTFDVCVMDEAGQTTLPVSLGPLMFSSMFVLVGDHYQLPPLVQSAEARENGLGISLFCRLSEAHPQAISALQSQYRMCQGIMDLSNALIYGDRLRCGSTEIANAKLAFSTLKCALPWLKNVLNPCRPVIFIDTDKLPAMEAREQKAINNPVEAHIIVEIAKALIKNGIGEEHVGIITPYNSQANLIRQAACMTSLEIHTIDKYQGRDKDCIIVSFVRSSENPSSCTSLLGDWHRINVALTRGKNSIKGSITEASHKKG 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0809 667 Pfam AAA domain 389 453 IPR041677 GO:0004386
Prci12g0809 667 Pfam AAA domain 286 376 IPR041677 GO:0004386
Prci12g0809 667 Pfam AAA domain 463 654 IPR041679 -
Prci12g0809 667 Gene3D - 484 656 IPR027417 -
Prci12g0809 667 Gene3D - 211 483 IPR027417 -
Prci12g0809 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 285 653 IPR027417 -
Prci12g0809 667 FunFam DNA replication ATP-dependent helicase/nuclease DNA2 382 483 - -
Prci12g0809 667 FunFam DNA replication ATP-dependent helicase/nuclease DNA2 228 377 - -
Prci12g0809 667 CDD SF1_C_Upf1 486 653 IPR047187 -
Prci12g0809 667 CDD DEXXQc_DNA2 285 485 IPR026851 GO:0017116
Prci12g0809 667 PANTHER DNA2/NAM7 HELICASE FAMILY 246 654 IPR045055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0809 Prci-Chr12 8108511 8115170 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0809 50 427 Core DNA Replication Machinery Family AT1G08840 62.532 1.33e-154 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0809 K10742 - gmx:100799415 939.102