Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0807 ATGGACAGACCTGCACAGTCCCAAACGAAACGCAAAAACGCTACCTTCTTCAAGGTTCTGATTCAAGATTTCTCTACCTTCTTGCAAATCCCACCGGCATTTAACAAAGTGATTGGCAAAGATGTGCCAAAGAAAGCAATGCTTGAGACTTATTATGGTAAATCTGAAGAAGTCGAAGTGGAAAAGCGTGAGAATCGAGTTTTTTTCTGTAAGGGATGGAGTAAATTTGTGGAGGACAATAAATTGGAGAATGGAGATTTCTTAGTGTTCAAATATATGTCTGATTATTCAAAGTTCAAGGTCAAAATCTACGGCAAAACTTGCTGCGAGAAGGAATGTTACAATGATGTTGCTGGAGATCAGACAAATAATAATAAAAGAAAGAGAGATGAGGAAGAAGAAGATAATGTGAACGAAGATGATGGAGAAACATCGAAAGCTGCAAAAAGAATTGAGACAGACTCTGATGTTGAAGACGAAGCTTCTGATGAAGATGAACCCATTGATATTGAATCTGATTCTTCTCGTCCTGTCGTCGTAGAAGGAGATAATGATGAAAGAGAAGTTGCAGGTAAATCCAAGCAGTCAACGAGTGAAGAGAGGAGGAATGAAGAGGGCGAAGCATTGGCTAATGATAATCAAATAGAATTTAAATCTGAGAATCCTTTCTTCCAAGTCAAACTCAAATCTTCAAGTATCAGCAGCTATCTGAATATACCATTGAGCTTTTCGAGAGAATACATAAGGAAGGAGAGCCAAAGGCAAGAGATAAAGCTAGAGATGTCAAAGTGCAACAAAATGTGGGATGTGGGTCTGATGGTGTTGTGGGGCCCAGGCAACAAGAAGGTTATTGCAGGAGCAAGACTGAGTCAGGGATGGAAGGGCTTCGTCTCAGAATATCAGCTGCAAATGGGAGATCTCTGCATCTTTGAAATGATCCACCATACTCATCACCTTCTCTTCCGTCTTCATGTTCATCGATGGGATCAACAGAACCACAAGTTTATTCACATATTTTAG 1020 0.4 MDRPAQSQTKRKNATFFKVLIQDFSTFLQIPPAFNKVIGKDVPKKAMLETYYGKSEEVEVEKRENRVFFCKGWSKFVEDNKLENGDFLVFKYMSDYSKFKVKIYGKTCCEKECYNDVAGDQTNNNKRKRDEEEEDNVNEDDGETSKAAKRIETDSDVEDEASDEDEPIDIESDSSRPVVVEGDNDEREVAGKSKQSTSEERRNEEGEALANDNQIEFKSENPFFQVKLKSSSISSYLNIPLSFSREYIRKESQRQEIKLEMSKCNKMWDVGLMVLWGPGNKKVIAGARLSQGWKGFVSEYQLQMGDLCIFEMIHHTHHLLFRLHVHRWDQQNHKFIHIF 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0807 339 Gene3D - 201 330 IPR015300 -
Prci12g0807 339 MobiDBLite consensus disorder prediction 176 211 - -
Prci12g0807 339 ProSiteProfiles B3 DNA-binding domain profile. 222 329 IPR003340 GO:0003677
Prci12g0807 339 PANTHER B3 DOMAIN-CONTAINING 8 316 - -
Prci12g0807 339 SUPERFAMILY DNA-binding pseudobarrel domain 217 326 IPR015300 -
Prci12g0807 339 SMART B3_2 223 327 IPR003340 GO:0003677
Prci12g0807 339 SMART B3_2 16 107 IPR003340 GO:0003677
Prci12g0807 339 CDD B3_DNA 16 104 IPR003340 GO:0003677
Prci12g0807 339 Pfam B3 DNA binding domain 223 322 IPR003340 GO:0003677
Prci12g0807 339 Pfam B3 DNA binding domain 16 104 IPR003340 GO:0003677
Prci12g0807 339 ProSiteProfiles B3 DNA-binding domain profile. 13 107 IPR003340 GO:0003677
Prci12g0807 339 CDD B3_DNA 222 324 IPR003340 GO:0003677
Prci12g0807 339 Gene3D - 7 109 IPR015300 -
Prci12g0807 339 SUPERFAMILY DNA-binding pseudobarrel domain 10 109 IPR015300 -
Prci12g0807 339 MobiDBLite consensus disorder prediction 119 214 - -
Prci12g0807 339 MobiDBLite consensus disorder prediction 141 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0807 Prci-Chr12 7815406 7818672 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0807 12 313 B3 DNA Binding Superfamily AT5G66980 28.349 4.60e-19 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci12g0807 B3 5.8e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0807 - - pcin:129289042 641.728