Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0788 ATGGCTCCCTCGTCTCCGATCGGTGCTCATTCGCATCCCTCGTCAATGGCTCCCGAAACCATGGAGAACAACATTCAGCCATTTTATGTCCTTCACAAAGCTTCATCTCGAGGAAAAGATAGAAAATCTACAGGATATGGAAGAAAGAGGAGGAGAAAAGAGGCACCTTCATCACTGCAAAGCCCTAAGAAACTTGACGGGAGTATTGCAGAAGAACATGATGGCCATCATCTTCAGCAATTGCAATTTGAAGCATTTTGCTTTATTTGGTCAAAAATTGAGTCAACTATCAAGGATGTTTTGAGAGATATCAATGCTAGTGTTTTTGATGAAATACGACAATGGGTTCTGGCATGCTTCGATGCTACTAGAGCAACTGGAGAACCTAGCTTTGCCAACTCAACTGGATCTTTCCCTGTTCTGAACACAAGTACTCCTAGCCAGCTATTCACTGGGTTGGTTATTACCAAAAACGTGGAGTTTGTTGATGACATTTTGACATTTGAAGAGCTTAGTCTCTTTTTGAAATCGCAAGGCTGCCATGTGGGTAAGCTATCATCATTAGACTTTTCAGTGAAAAATGGGATTGCTGGTTGCCTAAAGGCTTTGTTGCGAGAGTTTATGGACACCACTTTAGATTCAGCCGATATATCAAACTTAGCGTCATGGTATAGAGAACAAGGAAACTACAATAAACCCCTGGTTCTAATCATTAATGATTTGGAAAGATGCTCTAGTGAATGGGTAAACAGGGTGCCAATTATCTTAATATTTGGAGTTACGACCACAGTGGATTCCCTAAGAAGCATTCTTCCATCACATGTTCTTCACCATTTGTGCCCCTGTAAGTTTATGCTTGGATCACCAGCTGAGAGAATGGATTCAATTATTGAGACTGTTCTTGTGAAGCATTGCACTATATTCAGTATTGGTTACAAAGTGGCACTATTTCTTAGAAACAACTTCTTAAACAGGGATGGGACATTAACTTCTTTTATCCGAGCTTTGAAGATATCTTGCATGTTACATTTCTCTGTGGAGCCCCTGAGTCTTATACTTAGCCAAATACTTGCTGAAGAAGACCAGGATGGAAAATTTGCATTATCATCTGATACAGTGTTGAAGTTTGTGCATGAACTTCCACCGTGTGCAAGGAACCGAATGGCTGATGAGACTGGGAGAGATTTAGCCCAGGGCTTGGCAAATTTGGTTATTGCAAAGAAGCTTTGGAGCACTGCAGTCTTGTGCCTGCATGAAGCTGGAAAATATAACAGAATTCGACTGCTGGACTTGTTTTGTGAAGCACTCAATTCGGATTTGTTCCCATCAAGGGCTTCTGATTGTCAGGTGTCAAACAAAAATGATTGTGGCTTGACCTCATCCAGTTCCTACCAACAATGTGCTATTATTCAAAAGGATGGTTTTATCTCCCAGATAGTCCGCAAAGTGAGGGATCTTCCTCCTGCAATGTTATTTCAGTTGATTAAGAGCTGGGAAAAATGTACTGAGGGTGTTGTTGAGATTCATGACAAATTAAGAACTTTGCAATCTTCACTAAGATGTGAAGATGGAAAATGGCCAACCAAGATTTCTGACGTTTCCAAGAAACATGCAACCAGGATTTCATTAAACAGTGAGGACTCAAGAGTCTTAAATTCACAGGTTGTGACATTCATGAATGACTTGATCAGGAGTTATATGAGGCCCATTTCATGCATGCCTTTCCATGAAATTTTCTGTTTTAATGAGGTTGAGAAACTACAAATGGCCCTCACTGGAGATCCAAGAAGCAGAATTCAAGTTGATCTTTTGGACTTCAATAAAATTTTGCGGTGCAGTTGCTGTAAAAAGAGTAGCTCTGCCCTATTGCCATCCATGCATGATTCCTCAATCATGTATTCCCTGGCTGAGGAGCACGGTGATCTGATCAATCTTCATGACTGGTTCAAGTCTTTTAAAACTATTATTCTTGACCAAAAGAATAAACGCAAACAAAAGTTGAAGCAATCCCCACATAAAAGGAAGAGAAAAGATACAAATGAGTCTAGTGATCCAAGTGAAGCATCAATTCAAGCACGCTTTTGCAATGCAGTTACAGAGTTGCAGATAATTGGCTTACTTAGAATGCCCAGCAAGAGACGCCCTGATTGTGCACAGAGAGTGGCCTTTGGACTTTGA 2178 0.4073 MAPSSPIGAHSHPSSMAPETMENNIQPFYVLHKASSRGKDRKSTGYGRKRRRKEAPSSLQSPKKLDGSIAEEHDGHHLQQLQFEAFCFIWSKIESTIKDVLRDINASVFDEIRQWVLACFDATRATGEPSFANSTGSFPVLNTSTPSQLFTGLVITKNVEFVDDILTFEELSLFLKSQGCHVGKLSSLDFSVKNGIAGCLKALLREFMDTTLDSADISNLASWYREQGNYNKPLVLIINDLERCSSEWVNRVPIILIFGVTTTVDSLRSILPSHVLHHLCPCKFMLGSPAERMDSIIETVLVKHCTIFSIGYKVALFLRNNFLNRDGTLTSFIRALKISCMLHFSVEPLSLILSQILAEEDQDGKFALSSDTVLKFVHELPPCARNRMADETGRDLAQGLANLVIAKKLWSTAVLCLHEAGKYNRIRLLDLFCEALNSDLFPSRASDCQVSNKNDCGLTSSSSYQQCAIIQKDGFISQIVRKVRDLPPAMLFQLIKSWEKCTEGVVEIHDKLRTLQSSLRCEDGKWPTKISDVSKKHATRISLNSEDSRVLNSQVVTFMNDLIRSYMRPISCMPFHEIFCFNEVEKLQMALTGDPRSRIQVDLLDFNKILRCSCCKKSSSALLPSMHDSSIMYSLAEEHGDLINLHDWFKSFKTIILDQKNKRKQKLKQSPHKRKRKDTNESSDPSEASIQARFCNAVTELQIIGLLRMPSKRRPDCAQRVAFGL 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0788 725 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 20 724 IPR020795 GO:0003677|GO:0005664|GO:0006260
Prci12g0788 725 Pfam Origin recognition complex winged helix C-terminal 596 723 IPR040855 -
Prci12g0788 725 CDD Orc3 81 723 - -
Prci12g0788 725 MobiDBLite consensus disorder prediction 662 687 - -
Prci12g0788 725 MobiDBLite consensus disorder prediction 8 22 - -
Prci12g0788 725 MobiDBLite consensus disorder prediction 1 67 - -
Prci12g0788 725 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 71 214 IPR045667 -
Prci12g0788 725 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 237 351 IPR045667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0788 Prci-Chr12 7552159 7567960 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0788 1 694 Core DNA Replication Machinery Family AT5G16690 43.034 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0788 K02605 - gmx:100780646 924.08