Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0779 ATGCCTCCAAGCCCACCGCTTCGCCATCTTGCAGCTTCTGAAACAAAACTCTCTCCCAAATCTCACTTGATCTCACGCGCGTCGTCACGTGGCACTTCAAAAGCTTCTTCATCATCATCTTCAAACTCTTTCATGAAGGTCAGACTCGGAAGAAAAGGTCCTAATAATAATGATCTTCGAGCATGTTCTCATCATCACGAGATGAACATCGACGAGTCGTCTGTGATGAGTCCGTACTACAGGGGTCTTCTTGATCAATCTCTCGCTATCAACAACAAAGATGATGGTTTGCAGAATCACCACCATCAGTACAATCTGAACATTGGCCATAATAGCAACAATAATAGTACTGTGTTTTGGTCCAGAAAGAGTCCATACTACAAAGGGCTTACAGATTTCTCACTGGCTCTTCGTCGACGTGGAGGACAAGAAAACCTAGAATCGCATGACTATGGGTGGAGAAATCTTGAGGTTGAAGCAGCGTATGAGTCTAGTCCGTATTACAGAGGCCTTCTCACTGATTATTACTCTCTAGCAATTCCTAAACTTGATGAGCATGGTGGTGTTGGACCTGTAAACTTGTCGTCCCTTGCGTTCCACATGAACTTAGGTTTGTGCTTAGGGCGTAAGGATGAGATTTTGAAGAACGTCGTTCCCGATGCGGCGGCGGCGGAGGAGGCGGATTTGAGGGACTCCGGAAGACAGCGTGCTTTATCGTCGTTCTTATCACCCCCGGCACCGATACCCTTACCGTCACCATCGCTACCACTGCCGCCACCACCCCTGCCTATGTTTCCATCCGAAGGTAAGACTGCTCTGAGTATGAACCTGAAAGTAGAAGATGGGAAGTCTTTGGGGGAGAGAGAATCAGAAGAAAGTGCAGAGGAAAAAGCTCATGTGGATTTGGAGATTAATAATAATAAGGAAGAGGACATGACTAATGAACATGATTTGGACAATGAGGAGGAGATAAACAAGAAGTCCTTGAGAGAGAGTGTTTCCAATAATATTCCGGAACAAAGAATAGTGTCTGCAATAATATCATCAGAATCTTCAAGTAATAAAGATGTTCCTCAGGAGATTAAGGAAGAAGAAGAAGCAATAAGCTTGAAAGAATTTGTTTGGGCCAACAAGTATCAGCCGAAGGCATTATATGAGTTTATATGCCACAAACATATTGTTGCTCAGCTGCTAACAAAGGTAAAAGAGGAGGCGAGTGCTTGTGATAATCATTTTATATTTGAAGGACCACCTGGTGTAGGAAAGAGAACTATGATTCGAGCTCTGCTTCGAGAGCTTTTTGGCCATGAAGGAGTTAAGGTGACTGAAGAATATAAAACATTCACACCGAAGGAAGAAATGATCGGAAGCATCCAAGTGCCGATAAAGAAATCAGCCCATCATGTAGAGGTCAATCTCTCACAAACCAAGGGATATGAGAAGCAAGTGATTGTTGATTTGTTGAAAGAAACTTATCAAACCATTATCCTGAACAATTCTTTGCCTTGCACCCCAAAAAATTGCCAAGCAATAATTATATACGAGGCCGAGAGACTGTCAACAGAATTGTTGATGTACATAAAATGGATGCTGGAGAGATATATCAAGGGTTGCAATAAAGTCTTCTTTTGTTGTTCTGATGAATCAAAGCTCCAAATTGTGAAACCTCTCTGCAACACCTTTCGTCTTTCTCCTCCTTCCACTCAAGAGATCGTTGAGGTTTTGAAATACATAGGAAAAGAGGAAGGAAAAGAATTGTCTCCAGAATTCCTCGTGAAGGTTGTTGAGAAGTCCAAGAACAATCTTCGCCAGGCCATTCGTTCTTTGGAGGCCACTTGCCGCAACAAGGATTCAATCAAAGAAGACGAGTTAATTTTAACTGGATGGGAAGATGACATTGCAAATGTCGCTAAGAACATACTTCAAGAGCAAAGTTCAAAACAGCTATACACGATTCATGTGAAGCTTCAAAGCCTCATGATTCACAAGGTTTCACCTGACTTTGTTTACAAGAATTTGGTATCAGAGCTCAATTCTCTGGTGGATGAATCACTAAAACCAGGGCTTGAAAAACTAGAGAAGGAGTACAATCATAATGTTTACGAAATGAAATTGAGAAGTGGGAAGCATTCTGGTCAAGCTCACAACAAAGAAAGGGAATTATCTGATGAAAGGAACAACGAACTACCAAAAAAGAATAATGCTCGCAGTTACTTAGAAGTTGAAGAGTTCATAGCGAAATTCATGAGCTGGTACAAGAGTTCATCTGCAAAAGGTGATGATACATAA 2289 0.419 MPPSPPLRHLAASETKLSPKSHLISRASSRGTSKASSSSSSNSFMKVRLGRKGPNNNDLRACSHHHEMNIDESSVMSPYYRGLLDQSLAINNKDDGLQNHHHQYNLNIGHNSNNNSTVFWSRKSPYYKGLTDFSLALRRRGGQENLESHDYGWRNLEVEAAYESSPYYRGLLTDYYSLAIPKLDEHGGVGPVNLSSLAFHMNLGLCLGRKDEILKNVVPDAAAAEEADLRDSGRQRALSSFLSPPAPIPLPSPSLPLPPPPLPMFPSEGKTALSMNLKVEDGKSLGERESEESAEEKAHVDLEINNNKEEDMTNEHDLDNEEEINKKSLRESVSNNIPEQRIVSAIISSESSSNKDVPQEIKEEEEAISLKEFVWANKYQPKALYEFICHKHIVAQLLTKVKEEASACDNHFIFEGPPGVGKRTMIRALLRELFGHEGVKVTEEYKTFTPKEEMIGSIQVPIKKSAHHVEVNLSQTKGYEKQVIVDLLKETYQTIILNNSLPCTPKNCQAIIIYEAERLSTELLMYIKWMLERYIKGCNKVFFCCSDESKLQIVKPLCNTFRLSPPSTQEIVEVLKYIGKEEGKELSPEFLVKVVEKSKNNLRQAIRSLEATCRNKDSIKEDELILTGWEDDIANVAKNILQEQSSKQLYTIHVKLQSLMIHKVSPDFVYKNLVSELNSLVDESLKPGLEKLEKEYNHNVYEMKLRSGKHSGQAHNKERELSDERNNELPKKNNARSYLEVEEFIAKFMSWYKSSSAKGDDT 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0779 762 Gene3D - 567 627 - -
Prci12g0779 762 MobiDBLite consensus disorder prediction 281 304 - -
Prci12g0779 762 Coils Coil 592 612 - -
Prci12g0779 762 MobiDBLite consensus disorder prediction 705 733 - -
Prci12g0779 762 MobiDBLite consensus disorder prediction 18 46 - -
Prci12g0779 762 SUPERFAMILY post-AAA+ oligomerization domain-like 628 700 IPR008921 GO:0003677|GO:0006260
Prci12g0779 762 MobiDBLite consensus disorder prediction 1 58 - -
Prci12g0779 762 FunFam replication factor C subunit 3 567 625 - -
Prci12g0779 762 CDD HLD_clamp_RFC 566 622 - -
Prci12g0779 762 Gene3D - 373 566 IPR027417 -
Prci12g0779 762 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 375 695 - -
Prci12g0779 762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 373 623 IPR027417 -
Prci12g0779 762 Gene3D - 628 752 - -
Prci12g0779 762 MobiDBLite consensus disorder prediction 244 266 - -
Prci12g0779 762 MobiDBLite consensus disorder prediction 226 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0779 Prci-Chr12 7507669 7518132 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0779 373 753 Core DNA Replication Machinery Family AT5G27740 28.052 5.63e-43 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0779 K10756 - gmx:102664389 484.567