Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0774 ATGTCCTCTTCTTTTGCTCCTTCATCTTCCAAATCTTACGACGTGGTGATAACTCTGAGAGACACCAATCATCCTGTAAAAGCCTATCTTGAAGATGCTTTAGGAGATGCTGGAATCATTCCTTTCTTTGATGATGCACAGATGGAGAATCTTTTCGGACGTAATACTATAAGCATACGAGGGTGTAGAATTGCTATGATTATCTTCACAAGAACGTTCCTTGATTCTGACAGATGTCTGGAGAGGGTGGTGCAAATAATGGACTGTCATAGAACTATGAAAATACAAGTGCTGCCAGTATTCTGTGATCTGGGTAAGCGAGAAGTACAAGAGTTCATGTATGCGGATCGTTCACTAGAACGTGATTTCGCCCTCGCTGAAGTTATTGACTTATCCGGCTTCACACTGTCATCTGAGTTCAGCATTAATGACGAGGGGGAAATCAACAACCTTGTGGCAAAATTAAACCAATACTTGCTTGGCGACCTTCCCAACCATGCAATGCAGTTACAGCTTCGGGTAAGAGAAGTGATTCACCTATCGAAGACGAAACACTTTCCAATGAAAGGTGCAACCGTAATCGGAATATGGGGAGCTAGTGGTATTGGTAAAACTACTGTTGCTAAAGCCATTTATGATAAAATTGGTAAAGATTTTGAAAGTAAAATTTTCATTGAAAGTATCAAGGATGTATGGGAGAAAGATGATGAGCGAGTTATTCCACAAAAACAACTTCTCTTGGCTATTTATAAAATTGAACTGAGCGAGATAAATGACATTGAATTGACACTTCAACAACTGGATCAAACACTCTGTAGAAGAACTCTATTAGTACTTGATGATGTAGATCGAGTAGAACAACTCAGAGAACTATGTGGACAAAGAAACAATGTTGGCAAAGGGAGTTTAATTTTCATCACAACAAGAAATAGGGATTTACTTGATCCCTTTGTTGATGAGTCATATGAAATGAGAAGGTTGGACAATAATGATTCCCTTTCGCTTTTCAGTGTGCATGCATTCAGGAAACTTAGTCCAACGGATGATTTTGAGAATCTTTCAACAAAAGTAATGATTCAATGTGAAGGGTTACCATTGGCTCTTGAAGTTATTGGCTCTCTTTTGCATAACAGAGTAAAATCGGAGTGGAAAAGAATATTGAATAAATTGAAAGCAATTGTAGCTGGTCAAGTACAACAGAAATTGAAGATAAGCCTTGACTTTTTAACTGATCTAGAGAAAGATTTGTTCTTTAATATAGTTTGCTTCTATGTGGGTCAAAGGAAAGACGATGTCACAAAATTGCTAAAGGGCCAAAGATTCCCAGTAGAAAAGGTAATGCCCTTAATCATTAAGCGAAGAATTGTAAAGGTTGTGAATGGCAAGCTTCTTGTTCATGATTTGCTGCAGGAGGTAGGAAGGGAAATTAGCCCCTATAAGCCAATGCCCAAATATTTCCATGATGTATTTTTAAGTTTTAGAGGTGAAGACACACGTAAATCATTTACTACTCATCTTTATAATGCTCTAAAACAAGCAGGCATTAAGGTCTTCATAGATGATCAAGGGCTTGGAAGGGGAGAAAATATTTCATCCTCACTAATGCAAGCAATTAAAAGTTCTAGAATTTCAATTGTTGTATTCTCAAAAAATTATATTGGTTCTCATTGGTGCTTGCAAGAATTAGAGAAAATCATGGAGTGTCACAAAGCAACTTTTCAAGAGGTTTTACCCATTTTCTATGATGTGAGACCATCTGAATTTCGCAAACAACAAAATACTTTTAGAAAATTCCTTATGTATTGGAGATCTTCAAATGGCAAAAGTAAGAAGTTGACAACCAATTTGCAAAGAGCCCTTACTGAAGCTGCTAACTTATCTGGATGGGATATGCAAAATTACAGAATTGAATCTGAATTGATTGATCATGTTACTGAAACCATCACAATGAAGCTAAATGACAACAAAAGCTTGTTCATTGCTCACCATCCAGTGGGGGTGAAGTCTCGTGTGCAAGAAATTATGCAATTGCTAAATGATAAACCAAATGAGGTTATCATAGTTGGGATTTGGGGGATGGGAGGGATGGGCAAGACCACGATTGCCAAAGCCATTTATAATGAAATTGGTCAAAGATTTGATGGAAAGAATTTCCTTGCAAATGTTAGAGAAGTTTGGAAGCAAGATAATGGTCCAGTTTATTTGCAAGAACAGCTTCTTACAGGAATCTTAAGAGCAAGAAGGGTAACACTACCAAGTATAGAAAGGGGGGAAACCCTAGTTAAGGAAATGCTTTGTAATAAAAAGGCATTTATTGTACTTGATGATGTAAATAATGAAGACCAACTAAAAGCTTTATGTGGAAGTCGTGATTGGTTTGGTCAAGGCAGTAGAATAATCATCACTACTAGAGATGAACGTCTATTCAAGATACTTGGAGTGGATAAAGTATACACTATGAAAGAAATGGATGATGATGAATCTCTTGAGCTTTTTAGTTGGCATGTTTTTAAGCAAGCAGTCCCTAAAAGAGATTTCTTTGAACTTTCAAGAAGGATAGTTTCATATTCCGGAGGGTTACCACTAGCTCTTGAAGTCCTTGGCTGTTACTTGTTTGACAGAGAAATAATGCTTTGGGAAAGTGTTTTAGAGAAACTAAAACAAATTCCAAACGATCAAATACATAAAAAGCTAAAAATAAGCTATGATGGTTTGAGTGATCATACTGAGAAAGATTTGTTCCTTGATATATGTTGTTTTTTTATTGGCAAGGATATAAGCTATGCCACTCAAATATTAAATGGTTGCGGACTTCATGCAGACATTGGAATTAACCGTTTAATAGAGAGAAGCCTTGTAAAAATTGGCAACAAAAATAAGCTTGATATGCATGACTTATTGCGTGACATGGGAAGAGAAATCATACGTGAACAATCACCAGAGGAGCTAGAGAAGCGTGCAAGATTATGGTTTCATGATGATGTACTAGATGTGTTGAAAAATAGCACAGGGACAATAGCTATCAAGGGATTGGCTTTAAACTTGTCAAGGAACAATTCACTATCATTGAGTACCAAAGCATTTAAGAAGATGAAGAGACTTCGTCTGCTCCAACTTGATCGTGTAAAACTTGATGGAGATTATGGTTATCTATCAAAAGAATTGAGATGGCTTTGTTGGCAGGGATTCCCCTTAGAAAACATGCCAATGAACTTAAGTCTAGAAAAGGTAGTTGCCATAGACTTAAAGTGGAGTAATCTCATAAAAGTATGGGAGAAAAGCCAGTTGTTGGAGAGGTTAAAAATTCTGAATTTGAGTCATTCACATTACTTGATAGAAACACCTAACTTTTCAATGTTGCCTAACCTCAAGAAGTTAATACTCAAAGATTGTCTGAGTTTGTCTATGATTCACCCCTCCCTTGGAGATCTCAAATATATTATTTTGTTAAATTTGAAGGACTGCAAAAGCTTAAGAGATCTCCCAAGAAATATATATAAGTTGAGATCTTTAAACACCCTCAATCTTTTTGGTTGTTCAAAGATTGAAAAGTTAGAAGAAGACATCGAGCAAATGGAATCCTTGACAACTTTGATGGCCAATCAAACTGCTATAACACAAGTACCCTTTTCATTGGTGAGAATGAAAAGCATTAAATATGTGTCTCTATGCGGCTATGAAGGATTATCACGTGATGTATTTCCCTCTATTGTTTTGTCTTGGGTGTCCCCAACAAATCATTCAAAGTCCTTGTTCCAATCCTTTGGGATCATGCCATCTTTGATTAAGGGTCTATCACATCCTTCACGTGCCAAAAGTCATGAAATATTAGAAGCAATACCGAGCACGTCTCAAGCTTCATGTAGAAATTCTTCAACATTAATTGGTTTTCAAGATCAAATTCACATGGAAAGGTCAGAAACTTTCATGAGTTCCCTCACAATTCATGTTGGTGGGTTCAATAAAGTTATCGATGCACTTTTAAAAAATATCTCACAGGGATGCAGTGAAAGAGGGTTTGGTGACAGTTCTCTTCCCAAAGACAATCATCCTGAGTGGCTAAGTTTCAAAGGTGAAGGATCTTCAATATTGTTTGAAGTGCCTCAAATATTTGGCAGGAGCTTGAAAGGAATGATTATTTGCATTACCTATTTGTCTTCTCAAGACAACATGACATTATATCCTGTTGGTGTCTTGGTATCAAATCGTACAAAGACTACCATTAAATTGTACGAGAAAGATGCAACAACTACTTCAGAGGATGAAGAGTGGAAAAACATTATTTCTAATTGGGAGCCTGGTAACAGAGTAGAGGTTATAGTCACTTTTGCATGTGAATTAACAGTGAAAAAGACAGCTATCTATTTGGTATATGATGAAGATTTTAGCAAGAGAATTATGTACCACTAA 4410 0.366 MSSSFAPSSSKSYDVVITLRDTNHPVKAYLEDALGDAGIIPFFDDAQMENLFGRNTISIRGCRIAMIIFTRTFLDSDRCLERVVQIMDCHRTMKIQVLPVFCDLGKREVQEFMYADRSLERDFALAEVIDLSGFTLSSEFSINDEGEINNLVAKLNQYLLGDLPNHAMQLQLRVREVIHLSKTKHFPMKGATVIGIWGASGIGKTTVAKAIYDKIGKDFESKIFIESIKDVWEKDDERVIPQKQLLLAIYKIELSEINDIELTLQQLDQTLCRRTLLVLDDVDRVEQLRELCGQRNNVGKGSLIFITTRNRDLLDPFVDESYEMRRLDNNDSLSLFSVHAFRKLSPTDDFENLSTKVMIQCEGLPLALEVIGSLLHNRVKSEWKRILNKLKAIVAGQVQQKLKISLDFLTDLEKDLFFNIVCFYVGQRKDDVTKLLKGQRFPVEKVMPLIIKRRIVKVVNGKLLVHDLLQEVGREISPYKPMPKYFHDVFLSFRGEDTRKSFTTHLYNALKQAGIKVFIDDQGLGRGENISSSLMQAIKSSRISIVVFSKNYIGSHWCLQELEKIMECHKATFQEVLPIFYDVRPSEFRKQQNTFRKFLMYWRSSNGKSKKLTTNLQRALTEAANLSGWDMQNYRIESELIDHVTETITMKLNDNKSLFIAHHPVGVKSRVQEIMQLLNDKPNEVIIVGIWGMGGMGKTTIAKAIYNEIGQRFDGKNFLANVREVWKQDNGPVYLQEQLLTGILRARRVTLPSIERGETLVKEMLCNKKAFIVLDDVNNEDQLKALCGSRDWFGQGSRIIITTRDERLFKILGVDKVYTMKEMDDDESLELFSWHVFKQAVPKRDFFELSRRIVSYSGGLPLALEVLGCYLFDREIMLWESVLEKLKQIPNDQIHKKLKISYDGLSDHTEKDLFLDICCFFIGKDISYATQILNGCGLHADIGINRLIERSLVKIGNKNKLDMHDLLRDMGREIIREQSPEELEKRARLWFHDDVLDVLKNSTGTIAIKGLALNLSRNNSLSLSTKAFKKMKRLRLLQLDRVKLDGDYGYLSKELRWLCWQGFPLENMPMNLSLEKVVAIDLKWSNLIKVWEKSQLLERLKILNLSHSHYLIETPNFSMLPNLKKLILKDCLSLSMIHPSLGDLKYIILLNLKDCKSLRDLPRNIYKLRSLNTLNLFGCSKIEKLEEDIEQMESLTTLMANQTAITQVPFSLVRMKSIKYVSLCGYEGLSRDVFPSIVLSWVSPTNHSKSLFQSFGIMPSLIKGLSHPSRAKSHEILEAIPSTSQASCRNSSTLIGFQDQIHMERSETFMSSLTIHVGGFNKVIDALLKNISQGCSERGFGDSSLPKDNHPEWLSFKGEGSSILFEVPQIFGRSLKGMIICITYLSSQDNMTLYPVGVLVSNRTKTTIKLYEKDATTTSEDEEWKNIISNWEPGNRVEVIVTFACELTVKKTAIYLVYDEDFSKRIMYH 1469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0774 1469 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 487 1229 IPR044974 GO:0006952
Prci12g0774 1469 SMART AAA_5 190 328 IPR003593 GO:0016887
Prci12g0774 1469 SMART AAA_5 684 824 IPR003593 GO:0016887
Prci12g0774 1469 Gene3D Ribonuclease Inhibitor 1001 1162 IPR032675 -
Prci12g0774 1469 Pfam NB-ARC domain 191 403 IPR002182 GO:0043531
Prci12g0774 1469 Pfam NB-ARC domain 669 900 IPR002182 GO:0043531
Prci12g0774 1469 Coils Coil 1182 1202 - -
Prci12g0774 1469 ProSiteProfiles TIR domain profile. 485 652 IPR000157 GO:0007165
Prci12g0774 1469 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 109 IPR035897 -
Prci12g0774 1469 Gene3D Ribonuclease Inhibitor 1163 1266 IPR032675 -
Prci12g0774 1469 Gene3D - 157 319 IPR027417 -
Prci12g0774 1469 Gene3D - 651 816 IPR027417 -
Prci12g0774 1469 Gene3D - 482 650 IPR035897 -
Prci12g0774 1469 Gene3D - 6 156 IPR035897 -
Prci12g0774 1469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 418 IPR027417 -
Prci12g0774 1469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 656 917 IPR027417 -
Prci12g0774 1469 SMART till_3 486 626 IPR000157 GO:0007165
Prci12g0774 1469 Gene3D - 822 906 IPR042197 -
Prci12g0774 1469 Gene3D - 326 410 IPR042197 -
Prci12g0774 1469 ProSiteProfiles TIR domain profile. 11 160 IPR000157 GO:0007165
Prci12g0774 1469 SUPERFAMILY Toll/Interleukin receptor TIR domain 483 629 IPR035897 -
Prci12g0774 1469 SUPERFAMILY "Winged helix" DNA-binding domain 893 1000 IPR036390 -
Prci12g0774 1469 PRINTS Disease resistance protein signature 764 778 - -
Prci12g0774 1469 PRINTS Disease resistance protein signature 857 871 - -
Prci12g0774 1469 PRINTS Disease resistance protein signature 1095 1111 - -
Prci12g0774 1469 PRINTS Disease resistance protein signature 687 702 - -
Prci12g0774 1469 Pfam TIR domain 487 654 IPR000157 GO:0007165
Prci12g0774 1469 Pfam TIR domain 58 110 IPR000157 GO:0007165
Prci12g0774 1469 FunFam Disease resistance protein (TIR-NBS-LRR class) 484 654 - -
Prci12g0774 1469 SUPERFAMILY L domain-like 1013 1236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0774 Prci-Chr12 7423817 7435028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0774 8 476 WRKY Transcription Factor Family AT4G12020 25.207 8.10e-27 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0774 - - pcin:129288830 1815.43