Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0770 ATGACAAAAGAAGAGCGGAGATTGGATGAACTGAAAAAAGAAACGATTGAACATCCCAACAGTACGATATCATTGAAGCGGATACGGAGGGAAGATTCCATGGATCTAGTGAATGAGCCTATGAACAACCAGGGTTTATGCAATAAACATGAAGTGTTCATGAGTTTTATGAGAGGAGAAGATACTCAAGAATCTTTCCCTTACCGTCTCAATTCCTCTCTAAAGAATGCTGGAATTTGCATTATCAAAGACGATACTGAGCTTAACAGTGAATATGATATCTCAATCAAACTGTTGCGAAGCATTGAAGGTTCTGGAATTTCAATAATTATGTTCTCTGAACACTATGCTAGTTCCAAAAGGTGCCTCGATGAACTTGCAAAAATCATGGACTTTCGCAGAGCACGCTACCTGGTAGTTGTGACCATTTTTTATGGTGTACATCCCTCTGATGTTCGCGATCAAAAATCTAATTTTGGAAAAGAGTTTCGAAATCTTGTACAAAGAATTTCACCCACTGATGATCAAGTGTCGAGGTGGACGGCAGCTCTTAGTGAAGCTGGACGCATGGTTAAGTTTGTTGTGCCTAATTCCAAATCCAAGAATGAAAGTGAGGATATTGAGAATATTGTGAAGCATGTTCGTTGTATGCTGGACACGAAAGACCCGTTTGCCACAGATATCCTAGTTGGATTGAGTTCTCGAGTGCAAGAAGTGATTACAATGCTTCAGAATCATCAGTCAAAAGATGTTGTCTCTGTAGGGATATGGGGAATGGGGGGTATTGGCAAATCAACTATTGCTAAACTCATTTATGAGAACATTCGTCCCCAATTTGAGAGTTCATGTTTTCTTTCAAACGTCAGGGAAGCTTGGGGAATGGGACAAGGAAGTTCTTTACAAAGTACACTTCGTGGAATGATATGTGGACCATCAAATATAAGCATAGTTGGCATTGAATTAGGAAGCATAAGACTTTACCTTAAGAAGGTACTTGTTGTGCTTGATGATGTGAATCAGTTGGAGCAACTAGAAGCTTTATGGGGAACTCGTGAATGGTTTGGTGAAGGGAGTAGAATAATCATTACAACTAGAGATTTACACTTACTTGAGGCCTTTCAAGTGGACCATGTCTATGCCATGAAACTCTTGAGCAATTGTGAGTCCACTGAGCTTTTCAATAGGTATGTATTTAGACAAGAAAGTCCAGAAACATTCATCGAGCTTTCAAGAAGAATGGATGGGAGTCAGCATTGA 1257 0.397 MTKEERRLDELKKETIEHPNSTISLKRIRREDSMDLVNEPMNNQGLCNKHEVFMSFMRGEDTQESFPYRLNSSLKNAGICIIKDDTELNSEYDISIKLLRSIEGSGISIIMFSEHYASSKRCLDELAKIMDFRRARYLVVVTIFYGVHPSDVRDQKSNFGKEFRNLVQRISPTDDQVSRWTAALSEAGRMVKFVVPNSKSKNESEDIENIVKHVRCMLDTKDPFATDILVGLSSRVQEVITMLQNHQSKDVVSVGIWGMGGIGKSTIAKLIYENIRPQFESSCFLSNVREAWGMGQGSSLQSTLRGMICGPSNISIVGIELGSIRLYLKKVLVVLDDVNQLEQLEALWGTREWFGEGSRIIITTRDLHLLEAFQVDHVYAMKLLSNCESTELFNRYVFRQESPETFIELSRRMDGSQH 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0770 418 Pfam NB-ARC domain 235 404 IPR002182 GO:0043531
Prci12g0770 418 SMART till_3 49 190 IPR000157 GO:0007165
Prci12g0770 418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 215 413 IPR027417 -
Prci12g0770 418 Pfam TIR domain 49 217 IPR000157 GO:0007165
Prci12g0770 418 SUPERFAMILY Toll/Interleukin receptor TIR domain 49 190 IPR035897 -
Prci12g0770 418 ProSiteProfiles TIR domain profile. 48 218 IPR000157 GO:0007165
Prci12g0770 418 PRINTS Disease resistance protein signature 325 339 - -
Prci12g0770 418 PRINTS Disease resistance protein signature 253 268 - -
Prci12g0770 418 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 50 412 IPR044974 GO:0006952
Prci12g0770 418 Gene3D - 216 380 IPR027417 -
Prci12g0770 418 Gene3D - 47 215 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0770 Prci-Chr12 7269881 7272895 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0770 50 410 WRKY Transcription Factor Family AT4G12020 28.962 5.15e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0770 - - pcin:129289039 810.831