Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0758 ATGGAGAAGATTCGGCTCGTTAAATGTCCTAAGTGCAAAAAGATCCTTCCCGAGCCCCGCGGTTACATTGCTTATCAATGTGGTGGTTGTGGCGCTGTTCTTAAAGCTCGAGTTCGAGGCAAAAAACATGACGTGTTCTTGAGCTACAGAGGGGAAGACACTAGAGCATCCTTCACTTCACATCTTTATTCATCTCTATGTAATGCCGGCATTAATGTTTTCAAAGATGATGTTGAGATTCCGAGAGGTAACCATATATCAATTGAACTGTCACAAGGAATTGAAAGTTCTGAAATTTCAATCATCATCTTGTCTAAAAGATATGCTGGTTCGAGATGGTGTCTGGAGGAACTGTCAAAAATCATGGAACTTCACAAGAGAGTGGGTCTGGTGGTTTTGCCTGTGTTTTATGACGTGGATCCATCTGACGTTCGCCGCCTGACTTCGAGTTTTGGAGAAGCATTTGAAGATCTTATACTTAGAATCTCACCAGCAGAATATGAAGTGTTCAGATGGAGGATAGCATTGCGTGAAGTTGGGGGCATTGCAGGGTTTGTTGTGTTTGACTCGAGGAATGAAAGTGAGGATATTGAGAACATTGTTGAGCATGTTTGCAATATATTGGACAAGAAAGACTTGTTTGTCACAGATCACCCAGTTGGAGTTGACTCTCGCGTGCAAGATGTGATTTCAATGCTCCAGAAGCATCAATCAAAAGATGTTGTCTTGGTAGGGATATGGGGAATGGGGGGAATTGGCAAAACAACCATTGCCAAAGCCATTTACAATGAAATTGGTCACACATTTGATAGTAGAAGTTTTCTTTCAAATATCAGGGAAATTTGGGAGCAAGATAATGGCCAAATTTATCTGCAAAACAGACTTCTTTTAGAAATTTGTAAAACAACAAAGATGGCTATAAATAGCATTGAATCCGGAAAAACCACATTGAGGGATAGACTTCGCCATAAACGGGCATTTGTTGCACTTGATAATGTGGATAAATTAGAGCAACTAAATGCTTTGTCTGGAAGTCGTGAATGGTATGGACAAGGGAGTAGAATAATCATCACTACTAGAGATCAACATCTACTCAATGTTCTTAGAGTTGATTGTGTATATAAAATGGAAATTATGGGCCAAAATGAGTCTATTGAGCTTTTCAGCTGGCATGCATTTAAGCAAGCAGGTCCTAAAGAAGATTTTGCTAGACTGTCTAGAAATATAGTTGCTTATTCAGGGGGATTACCACTAGCTCTTGAAGTCTTGGGCTCTTATTTGTTTGATAGAGAAGTGATAGAGTGGAAAAATGCATTGGAGAAACTAAAAAGAATTCCCAACAATGAGATACAAAATAAGTTAAAAATAAGTTTTGATGGTTTAAATGATGAAATGGAGAAGGAAATATTTCTTGATATAGCTTGTTTTTTTATTGGGAAGGACAGGAATGATGTGACACAAATATTGAATGGTTGTGGAGTTTTTGCTGATATTGGCATAAGCGTCCTTAAGGAGCGAAGCCTTGTAACCATTGATAGAAGCAACAAACTTGGAATGCATGATTTGTTGCGGGACATGGGAAGAGAAATAATACGTGAACAGTCACCAAAAGAACCTGGAGAGCGAAGTAGATTATGGTTTCATGGGGATGTACAAGCTGTGTTATCAAAATGCACGGGAACCAATGCTATTGAAGGGCTAGCTTTGAAGTTGACACAAACTGAAAAAATGCATTTTCAGACAAAAGCATTTAAAAAGATGAATAGACTCAGATTACTTCACCTTGACAATGTACTACTAAGAGGGGACTATGAATACATTGGTAGAGATCTCAGGTGGCTTTGTTGGCATAGCTTTCCCTTGAAATACGTTCCTAGCAACTTTTATCAAGAAAATTTAGTTGCTGTTGACTTGAAATACAGCAGCCTCACTCGAATGTGGAAGGAACCCCAGTTATTGGAGAGACTTAAAATCCTCAATCTCAGCCACTGTACATGCTTGGAGCAAACTCCTGATTTTTCAAAACTACCAAGCCTTGAAAAGTTGATCCTCAAAGATTGTCCAAGTTTATCCATGATACATCATTCTATTGGGCTTCTTGATGAACTTGTTCTGCTAAATTTAAAGGATTGCACGGGCCTTCGTAGTCTCCCAGGAAGCATTTATAAACTGAAAAGTTTAAAAACTCTCATTCTTTCTGGTTGCCTGATGATTGAAAAGTTAGAGGAGGACATTGAGCAAATGGATTCTTTGACAACATTGATTGCTGATAACACTGCAATAACACAAGTTCCTTCTTCATTAATAAGATTAAAAAGGATTGGATATATATCTCTTTGCGGTTATGAAGGATTAACACAGGACGTGTTTCCTTCTCTCATTTGGTCTAGGATGTCCCCAACAAATAGTGCTCTATCTCTTATTCCAACGTATGGGGGCATGCCATCTCCAATTTTGTGGGATATGCTAAATAGTAGCATCCCAGGTGCTTCATCAATTCCAAGTAACCTACCTCAGCAACAATCTCTTTTATTGGAATATGGATTGGATATTCAAACTCAAGTGAACAGAGGAATCACAAAAATGATGTCTTCCTTGTTTGCCACAAATTGTAATGAGGACATCTCAAGGCTAGATAATTGCTTGAGATATCTTTTGATTAAAATTGGAATGACCGACCAAGACATTACTACTCTTTCAGAGTGTATTACACAGGGATTGACTCTTGCAAAGTGCAGCGATGATTGTATTCTCCCTGGTGATAATTATCCTTATTGGCTAACTTTCAAGGGAAAAGGGGCTTCTGTAAAATTCAAAGTGCCTAGAGTTAGTGGTCCTAATTTCAAAGGGATTGCTCTTTGTTATGTATATTTTCCTGCAGGTGATTCGGGCAACATGTCACCTGAATCTTCAGTTAACTTGTTATTGATTGTAAATTATACAAAGAAAACCACTTTGCTCTATGAAAGAGACAGAGTAACTTCCTTTGGAGAAGCAAAGTGGAAGGAAATAATAACAAATCTGAGCTCAGATGATGAAGTGGAGGTGATTGCAGTTTTGGGAATGGATTCACTGTGA 3078 0.385 MEKIRLVKCPKCKKILPEPRGYIAYQCGGCGAVLKARVRGKKHDVFLSYRGEDTRASFTSHLYSSLCNAGINVFKDDVEIPRGNHISIELSQGIESSEISIIILSKRYAGSRWCLEELSKIMELHKRVGLVVLPVFYDVDPSDVRRLTSSFGEAFEDLILRISPAEYEVFRWRIALREVGGIAGFVVFDSRNESEDIENIVEHVCNILDKKDLFVTDHPVGVDSRVQDVISMLQKHQSKDVVLVGIWGMGGIGKTTIAKAIYNEIGHTFDSRSFLSNIREIWEQDNGQIYLQNRLLLEICKTTKMAINSIESGKTTLRDRLRHKRAFVALDNVDKLEQLNALSGSREWYGQGSRIIITTRDQHLLNVLRVDCVYKMEIMGQNESIELFSWHAFKQAGPKEDFARLSRNIVAYSGGLPLALEVLGSYLFDREVIEWKNALEKLKRIPNNEIQNKLKISFDGLNDEMEKEIFLDIACFFIGKDRNDVTQILNGCGVFADIGISVLKERSLVTIDRSNKLGMHDLLRDMGREIIREQSPKEPGERSRLWFHGDVQAVLSKCTGTNAIEGLALKLTQTEKMHFQTKAFKKMNRLRLLHLDNVLLRGDYEYIGRDLRWLCWHSFPLKYVPSNFYQENLVAVDLKYSSLTRMWKEPQLLERLKILNLSHCTCLEQTPDFSKLPSLEKLILKDCPSLSMIHHSIGLLDELVLLNLKDCTGLRSLPGSIYKLKSLKTLILSGCLMIEKLEEDIEQMDSLTTLIADNTAITQVPSSLIRLKRIGYISLCGYEGLTQDVFPSLIWSRMSPTNSALSLIPTYGGMPSPILWDMLNSSIPGASSIPSNLPQQQSLLLEYGLDIQTQVNRGITKMMSSLFATNCNEDISRLDNCLRYLLIKIGMTDQDITTLSECITQGLTLAKCSDDCILPGDNYPYWLTFKGKGASVKFKVPRVSGPNFKGIALCYVYFPAGDSGNMSPESSVNLLLIVNYTKKTTLLYERDRVTSFGEAKWKEIITNLSSDDEVEVIAVLGMDSL 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0758 1025 Gene3D Ribonuclease Inhibitor 551 909 IPR032675 -
Prci12g0758 1025 Gene3D - 37 212 IPR035897 -
Prci12g0758 1025 SUPERFAMILY L domain-like 534 891 - -
Prci12g0758 1025 PRINTS Disease resistance protein signature 651 667 - -
Prci12g0758 1025 PRINTS Disease resistance protein signature 413 427 - -
Prci12g0758 1025 PRINTS Disease resistance protein signature 243 258 - -
Prci12g0758 1025 PRINTS Disease resistance protein signature 320 334 - -
Prci12g0758 1025 Pfam NB-ARC domain 224 448 IPR002182 GO:0043531
Prci12g0758 1025 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 43 785 IPR044974 GO:0006952
Prci12g0758 1025 Pfam TIR domain 42 206 IPR000157 GO:0007165
Prci12g0758 1025 FunFam Disease resistance protein (TIR-NBS-LRR class) 39 210 - -
Prci12g0758 1025 Gene3D - 213 373 IPR027417 -
Prci12g0758 1025 SMART till_3 42 182 IPR000157 GO:0007165
Prci12g0758 1025 Gene3D - 379 462 IPR042197 -
Prci12g0758 1025 SUPERFAMILY Toll/Interleukin receptor TIR domain 39 185 IPR035897 -
Prci12g0758 1025 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 213 473 IPR027417 -
Prci12g0758 1025 ProSiteProfiles TIR domain profile. 41 208 IPR000157 GO:0007165
Prci12g0758 1025 SUPERFAMILY "Winged helix" DNA-binding domain 448 555 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0758 Prci-Chr12 7147652 7158870 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0758 41 771 WRKY Transcription Factor Family AT4G12020 32.219 7.60e-89 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0758 - - pcin:129288023 2006.49