Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0756 ATGCATGTTCGTTTTATGTTGGGCATGAAAGACAGGGGTGCGTTTACCACAAATGATCACCTAGTTGGTGTTCTTTCTCAAGTGCAAGAAGTGATTAGAATGTTTCATGACCATCAATCAAAAGATGTTGTCTCCATAGGGATATGGGGAATGGGGGGTATTGGCAAAACAAGTCTTGCTAGAGTCATTTATGAGTGCATATCTGCCCGATTCGACATTCAATGTTTTCTTGCAAATTTGAGGGAAAGCTGGGAAACGGACGGCGAAGTTTATTTACAAAGAAGACTTATTTCAAATATATGTAGAGCACCAGATCGGAGAATAGATAGCATTGAATCAGGACTCCTTGAGTTAAAGAAAATATTCAGCCGTAAGAAGGTACTTTTTGTGCTTGATGATGTGAATCACTTGGAGCAACTAAATACTTTATGTGCGAGTCCTGAATGGTTTGGTGAAGGGAGTAGAATAATTATTACAACTCGAGATTTACATCTCCTTCAGGCCTTTCAAGTGGACCATGTCTATACCATGAAACTTTTGAGTAATATCGAGTCCACTGAACTTTTCAATAGGCATGCATTTAAAGGAGAAAGTCCAGAAGCATTCATCGAACTTTCCAGAGAAATAGTTTCCTTTACTGAGGGGCTGCCACTAGCTCTTAGGGTCGTTGGCGATTTTCTGTATGGCCGGTCATGGCCAGAATGGGATGGCACATGTACACGACTAACCACATGTCTCGATCAGGGTATATACCGAGGTCTAAAGGTTAGCTTTGACTCTTTACTAAAAAGAGCAAAGGAAATATTTCTAAATGTAGTTATACATTATATTGGGGAGGACGTGAATGATGCGATACAAAAGTTGGATGGCCCTGGATGTAATGCTAGCATAGGGATAAGAGCCCTAGTGGATCGAAGCCTTGTTACAATTGACGAGAACAACAGGCTTAGAGTGCATAATTTGTTGCAGCACATGGGGAGACAAATAATAAGTGAAAGTGCAATAAACGAGCTTCAAAATCAAGGTCATACGTACGAGGTGTTCTTGAGTTTTAGAGGTGAAGACACTCGAGCAACTTTTACTTCGCATCTTTATTCAGCTCTATGTAATGCTGGCATTGTCGTTTTCAAAGATGATGTTGAGCTTCCTAGAGGAAATCATATTTCGATGGAATTGTTGCAAGCAATTGGAAGCTCAAAAATCGCAATCATCATCTTCTCTAGAGGATATGCTGAATCTAAATGGTGTTTAGAGGAACTGTCAATAATCATGGAGCATCATAGATCAAATGATCAAGTGGTTCTTCCAGTGTTCTATGGTGTGGATCCATCAGAAATTCGTAATCAAACTTCTAATTTTGGAGAAGCATTTCAAAATCTTATGCAAAGAATTTCACCACCAGACAATCAAGTTGACAAGTGGAGGACAGCCCTTCTTAATGCTGGGGGCATTGCTGGATTTGTTGTACTTGGTTCCAGGAACGAGAGTGAAGATGTCAAAAAAGTTGTTGAAAATGTTTGTGACATATTGGATAAGAAAGACTTGTTTGTGGCAGACCACCCAGTAGGAGTGGATGACCGTGTGCAAGAAATGATCACAACACTTCAAAACAACCAATCAGAAGATGTTATCATAGTAGGGTTTTGGGGGATGGGTGGCATAGGCAAATCAACTATTGCCAAAGCCATTTATAATAAAATTGGTCGCAACTTTAATAGTAGAAGTTACCTTCCAAAGATCAGAGAGGTTTGGGACCAAGCTAATGGCCCGGTGTCTTTACAAAACCAACTTCTTTGTGAAATTTGCAAAACAACAGAAATGAAGATAAATAACATTGAATCAGGAAGAATCACATTGAAGGATAGACTTGGCCATAACAAAGCACTTCTTGTGCTTGATGATGTGGACAAGCAGGACCAACTAAAATATCTAGCTGGAAGTCGTGACTGGTTTCATCCAGAAAGTAAAATAATCATCACAACTAGAGATGAACATCTCCTTAGTGTCATTGAAGTAGATCTTGTATATAGAATGAAGCATTTGAGCAAAAGTGAATCTCTTGAGCTTTTAAGTTGGCATGCATTTAAGGAACCATCTCCTGGAGAAGAATTCAATGAGCTTTCCACAAGTATAGTTGCTTATTCTGGAGGTTTGCCACTAGCTCTTGAAGTCCTTGGCTCCTATTTGTTTCAAAGGAAAGTGTCAGACTGGGAGAGTGTATTGGAAAAGCTAAAGGAAATTCCCAACAATGACATATACAAGAAGTTAAAAATAAGCTACGATGGTTTAAATGAAGATACAGAGAAAGAAATATTCCTTGATATATCTTGCTTTCTTATTGGGATGGAAAAAAATGATGTCACACACATATTAAATGACTGCGGATATTTTGCAAATATTGGAATAAGTGTCCTTGAAGAGCGAAGTCTTCTTACCATTGATGAGAAAAATAGGATTGGAATGCATGATTTGCTGCGGGATATGGGAAGGGAAATAACTCGTGAAGAGTTTCCCAAAAAGGTTGAGAAGCGAACTAGGTTATGGTCTCATAAAGAAGCTGTGAATGTATTGTCAAAATACACTGGGAAAAAAGTTATTGATGTAGAGGGACTTGCATTGAAGTTCTCACAAATTGATGGGAAAGATAATTTTTATACAAAAGCATTTCAAAGGATGGAGAGGCACAGATTGCTTTGTCTTGGCAATGTGCGACTTGAAGGAGACTATAAATACATTAGTAGAGATCTCAAATGGCTTTATTGGCATGGGTTTCTTTTGAAGTGCATCCCTAGAAACTTTTATCAAGAAAATTTAGTTGCTCTTGAGTTGAAGGGCAGCAATCTCAGACAAGTGTGGGAGGAACCCCAGGTATTGAAAAGGCTGAAAATTCTCAATCTCAGCTACTCTACTTCATTGGCGCAAACTCCTGATTTTTCGAAACTGCCAAATCTTGAGAAGTTGATTCTTGAAAATTGTCCAAGTTTGTCCACAATACATCACTCTATCGGGTATCTTGGTGAACTTCTCTTGCTGAATTTAAAGGATTGCACTGGCCTTCATAGTCTCCCAAGAAGCATTTATAGATTGAAAAAGTTGAAAACTCTCATTCTTTCTGGTTGTTTGAAGATTGACAAGTTAGAGGAGGATATTGAGCAAATGGATTCATTGACTGCACTAATTGCTGACAAGACTGCAATAACTCAAGTGCCTTTTTCATTAGTGAGATTGAAAAGCATTAGATACATATCTCTTTGTGGTTATCAAGGATTATCACGTGAAGTGTTTCCTTCTCTCACTTGGTCTTGGATGAACCCAACAAATAATGTTCTATCTCTTATGCCAACTTATGGGGGCATGTCATCTTCAATTTTGTGGAATATGCTAAATAGTTGCATCCCTTCTCTTTCATCAATTCCTGATAGCCTGCCGAACCAACAAAATCGTCTATTGGAATGTGGAGAAGAGATCCAAACTCAAGTAAATAGAGGGGTCACAAGAATGTTGGAATCCTCATATGCCACAAATTGCACCAACATCTCAGTGTCAGAAGATTGCTTGAGATATCTCTTAATTCAAGTTGGAACGACTGACCAAGTCATTATCCCTGAGAGTATTTCACAGGGATTGACTTGCAAATATCCCTATGGGCAAACGTTCAAGGGTGTGCAAGATTCTGCAAAGTTTAAAGTGCCTCAAGTCAATGGTTGTCATTTGAAAGGGATGTATTTTGTGTTTTACCCTTTTGGCGGTGATTTAGGCAACGAGGCATCTAAATTTCTTGTCAACTTAATGATCATAAACTATACAAAGACAACTACTTTGCGCTACACGCGAGACACAGTGACTTCATTTGGAGAAGTGGAGTGGAAGGAAATCAAATCAAATCTGGATGCAAATGATCAAGTGGAGGTGATTGCAGATTTTGGGAATAGGTTCACTATGAAAGAGACTGTTGTGTACTTGATCTATGATGAGTCATTTGATGAACAGATTTTAGGAATAGATTCATCATCATCTTCTGCAGCAAGTATAACAGGAGAAAGTTAG 4047 0.3867 MHVRFMLGMKDRGAFTTNDHLVGVLSQVQEVIRMFHDHQSKDVVSIGIWGMGGIGKTSLARVIYECISARFDIQCFLANLRESWETDGEVYLQRRLISNICRAPDRRIDSIESGLLELKKIFSRKKVLFVLDDVNHLEQLNTLCASPEWFGEGSRIIITTRDLHLLQAFQVDHVYTMKLLSNIESTELFNRHAFKGESPEAFIELSREIVSFTEGLPLALRVVGDFLYGRSWPEWDGTCTRLTTCLDQGIYRGLKVSFDSLLKRAKEIFLNVVIHYIGEDVNDAIQKLDGPGCNASIGIRALVDRSLVTIDENNRLRVHNLLQHMGRQIISESAINELQNQGHTYEVFLSFRGEDTRATFTSHLYSALCNAGIVVFKDDVELPRGNHISMELLQAIGSSKIAIIIFSRGYAESKWCLEELSIIMEHHRSNDQVVLPVFYGVDPSEIRNQTSNFGEAFQNLMQRISPPDNQVDKWRTALLNAGGIAGFVVLGSRNESEDVKKVVENVCDILDKKDLFVADHPVGVDDRVQEMITTLQNNQSEDVIIVGFWGMGGIGKSTIAKAIYNKIGRNFNSRSYLPKIREVWDQANGPVSLQNQLLCEICKTTEMKINNIESGRITLKDRLGHNKALLVLDDVDKQDQLKYLAGSRDWFHPESKIIITTRDEHLLSVIEVDLVYRMKHLSKSESLELLSWHAFKEPSPGEEFNELSTSIVAYSGGLPLALEVLGSYLFQRKVSDWESVLEKLKEIPNNDIYKKLKISYDGLNEDTEKEIFLDISCFLIGMEKNDVTHILNDCGYFANIGISVLEERSLLTIDEKNRIGMHDLLRDMGREITREEFPKKVEKRTRLWSHKEAVNVLSKYTGKKVIDVEGLALKFSQIDGKDNFYTKAFQRMERHRLLCLGNVRLEGDYKYISRDLKWLYWHGFLLKCIPRNFYQENLVALELKGSNLRQVWEEPQVLKRLKILNLSYSTSLAQTPDFSKLPNLEKLILENCPSLSTIHHSIGYLGELLLLNLKDCTGLHSLPRSIYRLKKLKTLILSGCLKIDKLEEDIEQMDSLTALIADKTAITQVPFSLVRLKSIRYISLCGYQGLSREVFPSLTWSWMNPTNNVLSLMPTYGGMSSSILWNMLNSCIPSLSSIPDSLPNQQNRLLECGEEIQTQVNRGVTRMLESSYATNCTNISVSEDCLRYLLIQVGTTDQVIIPESISQGLTCKYPYGQTFKGVQDSAKFKVPQVNGCHLKGMYFVFYPFGGDLGNEASKFLVNLMIINYTKTTTLRYTRDTVTSFGEVEWKEIKSNLDANDQVEVIADFGNRFTMKETVVYLIYDESFDEQILGIDSSSSSAASITGES 1348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0756 1348 Gene3D Ribonuclease Inhibitor 846 1171 IPR032675 -
Prci12g0756 1348 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 345 1090 IPR044974 GO:0006952
Prci12g0756 1348 SUPERFAMILY L domain-like 885 1176 - -
Prci12g0756 1348 FunFam Disease resistance protein (TIR-NBS-LRR class) 341 512 - -
Prci12g0756 1348 Gene3D - 339 516 IPR035897 -
Prci12g0756 1348 Pfam NB-ARC domain 525 752 IPR002182 GO:0043531
Prci12g0756 1348 Pfam NB-ARC domain 27 236 IPR002182 GO:0043531
Prci12g0756 1348 Pfam TIR domain 345 506 IPR000157 GO:0007165
Prci12g0756 1348 SUPERFAMILY "Winged helix" DNA-binding domain 250 334 IPR036390 -
Prci12g0756 1348 Gene3D - 517 674 IPR027417 -
Prci12g0756 1348 SMART till_3 344 484 IPR000157 GO:0007165
Prci12g0756 1348 ProSiteProfiles TIR domain profile. 343 510 IPR000157 GO:0007165
Prci12g0756 1348 PRINTS Disease resistance protein signature 622 636 - -
Prci12g0756 1348 PRINTS Disease resistance protein signature 956 972 - -
Prci12g0756 1348 PRINTS Disease resistance protein signature 715 729 - -
Prci12g0756 1348 PRINTS Disease resistance protein signature 545 560 - -
Prci12g0756 1348 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 270 IPR027417 -
Prci12g0756 1348 Gene3D - 11 174 IPR027417 -
Prci12g0756 1348 SUPERFAMILY "Winged helix" DNA-binding domain 751 857 IPR036390 -
Prci12g0756 1348 SUPERFAMILY Toll/Interleukin receptor TIR domain 336 486 IPR035897 -
Prci12g0756 1348 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 515 775 IPR027417 -
Prci12g0756 1348 Gene3D - 180 261 IPR042197 -
Prci12g0756 1348 Gene3D - 680 764 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0756 Prci-Chr12 7110654 7119946 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0756 20 353 WRKY Transcription Factor Family AT4G12020 29.738 1.20e-35 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0756 - - pcin:129287786 2622.04