Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0754 ATGGATCTGTTGAATGAGCCTGTGAACCACCAAGGTTTAGGCAATAAACATGAACTGTTCATGAGTTTTTTGAGAGGCGAAGACACTCAAGAATCTTTCCCTTCCCGTCTCTGTTCATCTCTAAGGAATGCTGGAATTTCCGTTATCAAAGAAGATACTGAAAATGAAATCTCAATTGAACCGTTGCGAAGGATGATTGAAGGTTCTGGATTTTCAATCATCATCTTCTCCGAGCAGTATGCTAGTTCCAGAAGTTTCCTCGAAGAGGTTGCAAAAGCCATGGACTTTCACAGAGCACAGTACGATCACTTGGTTCTGACCATATTCTATGGCGTAGATCCATCCGATGTTGGCAATCAAGAATCCAATTTTGAGAAACAGTTTCAAAATCTTATACAAAGAATTTCACCCACTGAAGATCAAGTGTTGAGGTGGAGGATAGCTCTCAGTGAAGCTGGACGCATGGTTAAGTTTGTTGTACCTAATTCCAATTCCAAGAATGAAAGTGAGAATATTGAGAATATTGTCATGCATGTTCGTTTTATGTTGGGCATGAAAGACAGGGGTGCGTTTACCACAAATGATCACCTAGTTGGTGTTCTTTCTCAAGTGCAAGAAGTGATTAGAATGTTTCATGACCATCAATCAAAAGATGTTGTCTCCATAGGGATATGGGGAATGGGGGGTATTGGCAAAACAAGTCTTGCTAGAGTCATTTATGAGTGCATATCTGCCCGATTCGACATTCAATGTTTTCTTGCAAATTTGAGGGAAAGCTGGGAAACGGACGGCGAAGTTTATTTACAAAGAAGACTTATTTCAAATATATGTAGAGCACCAGATCGGAGAATAGATAGCATTGAATCAGGACTCCTTGAGTTAAAGAAAATATTCAGCCGTAAGAAGGTACTTTTTGTGCTTGATGATGTGAATCACTTGGAGCAACTAAATACTTTATGTGCGAGTCCTGAATGGTTTGGTGAAGGGAGTAGAATAATTATTACAACTCGAGATTTACATCTCCTTCAGGCCTTTCAAGTGGACCATGTCTATACCATGAAACTTTTGAGTAATATCGAGTCCACTGAACTTTTCAATAGGCATGCATTTAAAGGAGAAAGTCCAGAAGCATTCATCGAACTTTCCAGAGAAATAGTTTCCTTTACTGAGGGGCTGCCACTAGCTCTTAGGGTCGTTGGCGATTTTCTGTATGGCCGGTCATGGCCAGAATGGGATGGCACATGTACACGACTAACCACATGTCTCGATCAGGGTATATACCGAGGTCTAAAGGTTAGCTTTGACTCTTTACTAAAAAGAGCAAAGGAAATATTTCTAAATGTAGTTATACATTATATTGGGGAGGACGTGAATGATGCGATACAAAAGTTGGATGGCCCTGGATGTAATGCTAGCATAGGGATAAGAGCCCTAGTGGATCGAAGCCTTGTTACAATTGACGAGAACAACAGGCTTAGAGTGCATAATTTGTTGCAGCACATGGGGAGACAAATAATAAGTGAAAGTGCAATAAACGAGCTTCAAAATCAAGGTCATACGTACGAGGTGTTCTTGAGTTTTAGAGGTGAAGACACTCGAGCAACTTTTACTTCGCATCTTTATTCAGCTCTATGTAATGCTGGCATTGTCGTTTTCAAAGATGATGTTGAGCTTCCTAGAGGAAATCATATTTCGATGGAATTGTTGCAAGCAATTGGAAGCTCAAAAATCGCAATCATCATCTTCTCTAGAGGATATGCTGAATCTAAATGGTGTTTAGAGGAACTGTCAATAATCATGGAGCATCATAGATCAAATGATCAAGTGGTTCTTCCAGTGTTCTATGGTGTGGATCCATCAGAAATTCGTAATCAAACTTCTAATTTTGGAGAAGCATTTCAAAATCTTATGCAAAGAATTTCACCACCAGACAATCAAGTTGACAAGTGGAGGACAGCCCTTCTTAATGCTGGGGGCATTGCTGGATTTGTTGTACTTGGTTCCAGGAACGAGAGTGAAGATGTCAAAAAAGTTGTTGAAAATGTTTGTGACATATTGGATAAGAAAGACTTGTTTGTGGCAGACCACCCAGTAGGAGTGGATGACCGTGTGCAAGAAATGATCACAACACTTCAAAACAACCAATCAGAAGATGTTATCATAGTAGGGTTTTGGGGGATGGGTGGCATAGGCAAATCAACTATTGCCAAAGCCATTTATAATAAAATTGGTCGCAACTTTAATAGTAGAAGTTACCTTCCAAAGATCAGAGAGGTTTGGGACCAAGCTAATGGCCCGGTGTCTTTACAAAACCAACTTCTTTGTGAAATTTGCAAAACAACAGAAATGAAGATAAATAACATTGAATCAGGAAGAATCACATTGAAGGATAGACTTGGCCATAACAAAGCACTTCTTGTGCTTGATGATGTGGACAAGCAGGACCAACTAAAATATCTAGCTGGAAGTCGTGACTGGTTTCATCCAGAAAGTAAAATAATCATCACAACTAGAGATGAACATCTCCTTAGTGTCATTGAAGTAGATCTTGTATATAGAATGAAGCATTTGAGCAAAAGTGAATCTCTTGAGCTTTTAAGTTGGCATGCATTTAAGGAACCATCTCCTGGAGAAGAATTCAATGAGCTTTCCACAAGTATAGTTGCTTATTCTGGAGGTTTGCCACTAGCTCTTGAAGTCCTTGGCTCCTATTTGTTTCAAAGGAAAGTGTCAGACTGGGAGAGTGTATTGGAAAAGCTAAAGGAAATTCCCAACAATGACATATACAAGAAGTTAAAAATAAGCTACGATGGTTTAAATGAAGATACAGAGAAAGAAATATTCCTTGATATATCTTGCTTTCTTATTGGGATGGAAAAAAATGATGTCACACACATATTAAATGACTGCGGATATTTTGCAAATATTGGAATAAGTGTCCTTGAAGAGCGAAGTCTTCTTACCATTGATGAGAAAAATAGGATTGGAATGCATGATTTGCTGCGGGATATGGGAAGGGAAATAACTCGTGAAGAGTTTCCCAAAAAGGTTGAGAAGCGAACTAGGTTATGGTCTCATAAAGAAGCTGTGAATGTATTGTCAAAATACACTGGGAAAAAAGTTATTGATGTAGAGGGACTTGCATTGAAGTTCTCACAAATTGATGGGAAAGATAATTTTTATACAAAAGCATTTCAAAGGATGGAGAGGCACAGATTGCTTTGTCTTGGCAATGTGCGACTTGAAGGAGACTATAAATACATTAGTAGAGATCTCAAATGGCTTTATTGGCATGGGTTTCTTTTGAAGTGCATCCCTAGAAACTTTTATCAAGAAAATTTAGTTGCTCTTGAGTTGAAGGGCAGCAATCTCAGACAAGTGTGGGAGGAACCCCAGGTATTGAAAAGGCTGAAAATTCTCAATCTCAGCTACTCTACTTCATTGGCGCAAACTCCTGATTTTTCGAAACTGCCAAATCTTGAGAAGTTGATTCTTGAAAATTGTCCAAGTTTGTCCACAATACATCACTCTATCGGGTATCTTGGTGAACTTCTCTTGCTGAATTTAAAGGATTGCACTGGCCTTCATAGTCTCCCAAGAAGCATTTATAGATTGAAAAAGTTGAAAACTCTCATTCTTTCTGGTTGTTTGAAGATTGACAAGTTAGAGGAGGATATTGAGCAAATGGATTCATTGACTGCACTAATTGCTGACAAGACTGCAATAACTCAAGTGCCTTTTTCATTAGTGAGATTGAAAAGCATTAGATACATATCTCTTTGTGGTTATCAAGGATTATCACGTGAAGTGTTTCCTTCTCTCACTTGGTCTTGGATGAACCCAACAAATAATGTTCTATCTCTTATGCCAACTTATGGGGGCATGTCATCTTCAATTTTGTGGAATATGCTAAATAGTTGCATCCCTTCTCTTTCATCAATTCCTGATAGCCTGCCGAACCAACAAAATCGTCTATTGGAATGTGGAGAAGAGATCCAAACTCAAGTAAATAGAGGGGTCACAAGAATGTTGGAATCCTCATATGCCACAAATTGCACCAACATCTCAGTGTCAGAAGATTGCTTGAGATATCTCTTAATTCAAGTTGGAACGACTGACCAAGTCATTATCCCTGAGAGTATTTCACAGGGATTGACTTGCAAATATCCCTATGGGCAAACGTTCAAGGGTGTGCAAGATTCTGCAAAGTTTAAAGTGCCTCAAGTCAATGGTTGTCATTTGAAAGGGATGTATTTTGTGTTTTACCCTTTTGGCGGTGATTTAGGCAACGAGGCATCTAAATTTCTTGTCAACTTAATGATCATAAACTATACAAAGACAACTACTTTGCGCTACACGCGAGACACAGTGACTTCATTTGGAGAAGTGGAGTGGAAGGAAATCAAATCAAATCTGGATGCAAATGATCAAGTGGAGGTGATTGCAGATTTTGGGAATAGGTTCACTATGAAAGAGACTGTTGTGTACTTGATCTATGATGAGTCATTTGATGAACAGATTTTAGGAATAGATTCATCATCATCTTCTGCAGCAAGTATAACAGGAGAAAGTTAG 4575 0.3884 MDLLNEPVNHQGLGNKHELFMSFLRGEDTQESFPSRLCSSLRNAGISVIKEDTENEISIEPLRRMIEGSGFSIIIFSEQYASSRSFLEEVAKAMDFHRAQYDHLVLTIFYGVDPSDVGNQESNFEKQFQNLIQRISPTEDQVLRWRIALSEAGRMVKFVVPNSNSKNESENIENIVMHVRFMLGMKDRGAFTTNDHLVGVLSQVQEVIRMFHDHQSKDVVSIGIWGMGGIGKTSLARVIYECISARFDIQCFLANLRESWETDGEVYLQRRLISNICRAPDRRIDSIESGLLELKKIFSRKKVLFVLDDVNHLEQLNTLCASPEWFGEGSRIIITTRDLHLLQAFQVDHVYTMKLLSNIESTELFNRHAFKGESPEAFIELSREIVSFTEGLPLALRVVGDFLYGRSWPEWDGTCTRLTTCLDQGIYRGLKVSFDSLLKRAKEIFLNVVIHYIGEDVNDAIQKLDGPGCNASIGIRALVDRSLVTIDENNRLRVHNLLQHMGRQIISESAINELQNQGHTYEVFLSFRGEDTRATFTSHLYSALCNAGIVVFKDDVELPRGNHISMELLQAIGSSKIAIIIFSRGYAESKWCLEELSIIMEHHRSNDQVVLPVFYGVDPSEIRNQTSNFGEAFQNLMQRISPPDNQVDKWRTALLNAGGIAGFVVLGSRNESEDVKKVVENVCDILDKKDLFVADHPVGVDDRVQEMITTLQNNQSEDVIIVGFWGMGGIGKSTIAKAIYNKIGRNFNSRSYLPKIREVWDQANGPVSLQNQLLCEICKTTEMKINNIESGRITLKDRLGHNKALLVLDDVDKQDQLKYLAGSRDWFHPESKIIITTRDEHLLSVIEVDLVYRMKHLSKSESLELLSWHAFKEPSPGEEFNELSTSIVAYSGGLPLALEVLGSYLFQRKVSDWESVLEKLKEIPNNDIYKKLKISYDGLNEDTEKEIFLDISCFLIGMEKNDVTHILNDCGYFANIGISVLEERSLLTIDEKNRIGMHDLLRDMGREITREEFPKKVEKRTRLWSHKEAVNVLSKYTGKKVIDVEGLALKFSQIDGKDNFYTKAFQRMERHRLLCLGNVRLEGDYKYISRDLKWLYWHGFLLKCIPRNFYQENLVALELKGSNLRQVWEEPQVLKRLKILNLSYSTSLAQTPDFSKLPNLEKLILENCPSLSTIHHSIGYLGELLLLNLKDCTGLHSLPRSIYRLKKLKTLILSGCLKIDKLEEDIEQMDSLTALIADKTAITQVPFSLVRLKSIRYISLCGYQGLSREVFPSLTWSWMNPTNNVLSLMPTYGGMSSSILWNMLNSCIPSLSSIPDSLPNQQNRLLECGEEIQTQVNRGVTRMLESSYATNCTNISVSEDCLRYLLIQVGTTDQVIIPESISQGLTCKYPYGQTFKGVQDSAKFKVPQVNGCHLKGMYFVFYPFGGDLGNEASKFLVNLMIINYTKTTTLRYTRDTVTSFGEVEWKEIKSNLDANDQVEVIADFGNRFTMKETVVYLIYDESFDEQILGIDSSSSSAASITGES 1524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0754 1524 PRINTS Disease resistance protein signature 721 736 - -
Prci12g0754 1524 PRINTS Disease resistance protein signature 1132 1148 - -
Prci12g0754 1524 PRINTS Disease resistance protein signature 891 905 - -
Prci12g0754 1524 PRINTS Disease resistance protein signature 798 812 - -
Prci12g0754 1524 Gene3D - 856 940 IPR042197 -
Prci12g0754 1524 Gene3D - 356 437 IPR042197 -
Prci12g0754 1524 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 521 1266 IPR044974 GO:0006952
Prci12g0754 1524 FunFam Disease resistance protein (TIR-NBS-LRR class) 517 688 - -
Prci12g0754 1524 SUPERFAMILY L domain-like 1061 1352 - -
Prci12g0754 1524 Gene3D Ribonuclease Inhibitor 1022 1346 IPR032675 -
Prci12g0754 1524 SUPERFAMILY Toll/Interleukin receptor TIR domain 512 662 IPR035897 -
Prci12g0754 1524 Gene3D - 694 850 IPR027417 -
Prci12g0754 1524 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 691 951 IPR027417 -
Prci12g0754 1524 Gene3D - 515 693 IPR035897 -
Prci12g0754 1524 Gene3D - 188 350 IPR027417 -
Prci12g0754 1524 Pfam TIR domain 20 186 IPR000157 GO:0007165
Prci12g0754 1524 Pfam TIR domain 521 682 IPR000157 GO:0007165
Prci12g0754 1524 SMART till_3 16 155 IPR000157 GO:0007165
Prci12g0754 1524 SMART till_3 520 660 IPR000157 GO:0007165
Prci12g0754 1524 Pfam NB-ARC domain 203 412 IPR002182 GO:0043531
Prci12g0754 1524 Pfam NB-ARC domain 701 928 IPR002182 GO:0043531
Prci12g0754 1524 Gene3D - 14 187 IPR035897 -
Prci12g0754 1524 SUPERFAMILY "Winged helix" DNA-binding domain 927 1033 IPR036390 -
Prci12g0754 1524 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Prci12g0754 1524 ProSiteProfiles TIR domain profile. 519 686 IPR000157 GO:0007165
Prci12g0754 1524 SUPERFAMILY "Winged helix" DNA-binding domain 426 510 IPR036390 -
Prci12g0754 1524 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 155 IPR035897 -
Prci12g0754 1524 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 446 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0754 Prci-Chr12 7110654 7121952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0754 17 529 WRKY Transcription Factor Family AT4G12020 28.244 2.22e-46 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0754 - - pcin:129287786 2949.07