Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0729 ATGGCAGCGGATTCGTCTCTCGAGGGTTTCACACTTGATCCTGCTAAATGCAGTAAGTTAAGTATGGAGGAAAAGAGAGAACTTGTATATGAAATATCCAAGTGGCCAAATGATGCATTGGAAATGCTACAGTCATGGAGCCGTCAGGAGATTTTACAAATCCTTTGTGCTGAGATGGGGAAAGAGAGGAAGTATACTGGATTAACAAAGGTCAAAATTATAGAAAACCTTCTGAAAATTGTTTCTGAAAAGAAGTCTGGAGGTCAGGAAATTGCTACAGACCTTGAGCCACATTCTTCTACTTCACATGGCCAGAAACCTGCCAAAAGGCAGAGGAAAAATGAGAATCCGTCTCGATTACCTCTTCCAGTAAATGATGTTTCTGTCAACAATGGAGTTGGAGATGTAAGTAGTATTTCATACTGCAAAAACACGGCATGCAAAGCTACAGTAAGTGAATCAGATGCGTTTTGCAAAAGATGCTCATGCTGCATTTGTCATAAATATGATGACAACAAAGATCCCAGCCTTTGGTTAATATGCGTCTCCGAGCCCCCATTTCTTGGTGTTTCTTGTGGCTTGTCATGTCATCTTGAGTGTGCTTTAAGGCATGATAATTCTGGCATTACCAAAGATGGAAAACGTCCCAAGCTTGATGGAAGCTTCTACTGCATCTCATGTGGGAAAGAGAATGACTTGCTCGGATGCTGGAGAAAGCAACTGATGGTAGCGAAGGATACCAGACGTGTTGACATACTATGCTACCGTGTTTCCTTGAGCCAAAGAATTTTACAAGGGACTGAAAAGTATAAAAGACTTTATGAAATTGTTGGGGAGGCAGTGAGGAAACTTGAACCTGAATTGGGCCCACTAACTGGTTCGCCAGTGAAGATTGGTAGGGGCATTGTGAACAGACTTTCATCAGGGCCAGAGGTTCAGAAACTTTGTGGTTTGGCTTTGGAGTCGCTGGGTCCTTTTCTTTTTAAAAGGGTTATGCCTCCATCACCTAATCCAACAATTCAAGATGCAAATTTGATTTCTACAAATATGGTGAGATTTAAAGATGTCAGAGATATATCCCTGACTGTGATTTTGGGTTCTGAGGATCCTTCCGAAGAAAATATCAGTGGCTATTCCTTGTGGCATCGCAAGGCTCTTGATGTGGAATATCCAGTTGAGCCAACTTGTACTTTGGTTCTACCTGACAGAAGTTTCAATATAAGGGGTCTAATTCCAGCTACAAAATATAGTTTCAAAGTTGTTTCCTTTAATGGCACAAGAGAGATGGGTATGTGTGAAGTTCAAATCTCAACAGTGCCGGGCGAGTATGAAGTCCCTAACTGTTCAGCAACCGAAAGAAGTCAGAGCCCCGTAACCAACTGTAGCAGCCATTCCAATCCTTCATCAGTGGAAGATGAAACTAATAACAGTAATCCATTTAGTGATCAGACTGATGATCGGGCAGACAATTATCTTACTTATCACAAGGATGCTGACAAGCTTGCGTCTGAAAAATTATCCAATGATGCTATTAAATGTTCCAACACCGTTGTAGGGGGACTGCCTGCTGATGCAGATTCTTTGTCAGAAAAGCAACGTGCTAGAGGCTTGGCCATAACCATACCTGCTTCTGAAATGCTAAAGCTTGACAACAACCATTCACCAGAGGGACAAATCACTGAGGACTTGAGCACTGATGATGGGTTGAATTCCCCTGTTCAGATTGGGAGGGAATGTGTGCCACCGGTGCGTACATTGGAAGCAAGCTTGCCCATTACACCCTGCAAGTTGGAAATACTCAAGGATGGGGCAGGAAGAAACTGTAGATCCAAGTCCATGTGTAAGGATCAAGAAAATGGTTCTGGGAAGAGAGAAGGCCCTCAAGATGGAAGCACATCTAAGAAGAGAATTGAGCAAAGGCAAGATGAGGTTTGTGCTGTCAACACATATTCAGACCGGGATTTTGAGTATTATGTGAAGGTGATCAGATGGCTCGAGTGTGAAGGGCACATAGAAAAGAACTTCAGACAGAAGTTTTTGACTTGGTACAGCTTGAGAGCAACGCCGCAGGAAGTAAAGATTGTGAAAGTGTACATTGATACATTTCTTGAAGATCCAGCATCTCTTGCAGAGCAGCTTGTGGACACGTTCTCAGAATGTATATCAAACAAGAGACCATCTGTGGTGCCAGCTGGGTTCTGCATGAAGCTCTGGCATTGA 2220 0.4288 MAADSSLEGFTLDPAKCSKLSMEEKRELVYEISKWPNDALEMLQSWSRQEILQILCAEMGKERKYTGLTKVKIIENLLKIVSEKKSGGQEIATDLEPHSSTSHGQKPAKRQRKNENPSRLPLPVNDVSVNNGVGDVSSISYCKNTACKATVSESDAFCKRCSCCICHKYDDNKDPSLWLICVSEPPFLGVSCGLSCHLECALRHDNSGITKDGKRPKLDGSFYCISCGKENDLLGCWRKQLMVAKDTRRVDILCYRVSLSQRILQGTEKYKRLYEIVGEAVRKLEPELGPLTGSPVKIGRGIVNRLSSGPEVQKLCGLALESLGPFLFKRVMPPSPNPTIQDANLISTNMVRFKDVRDISLTVILGSEDPSEENISGYSLWHRKALDVEYPVEPTCTLVLPDRSFNIRGLIPATKYSFKVVSFNGTREMGMCEVQISTVPGEYEVPNCSATERSQSPVTNCSSHSNPSSVEDETNNSNPFSDQTDDRADNYLTYHKDADKLASEKLSNDAIKCSNTVVGGLPADADSLSEKQRARGLAITIPASEMLKLDNNHSPEGQITEDLSTDDGLNSPVQIGRECVPPVRTLEASLPITPCKLEILKDGAGRNCRSKSMCKDQENGSGKREGPQDGSTSKKRIEQRQDEVCAVNTYSDRDFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATPQEVKIVKVYIDTFLEDPASLAEQLVDTFSECISNKRPSVVPAGFCMKLWH 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0729 739 PANTHER VIN3-LIKE PROTEIN 2-RELATED 10 739 IPR044514 GO:0010048|GO:0040029
Prci12g0729 739 Pfam PHD - plant homeodomain finger protein 142 261 IPR032881 -
Prci12g0729 739 SUPERFAMILY Fibronectin type III 372 426 IPR036116 GO:0005515
Prci12g0729 739 Gene3D Immunoglobulins 351 447 IPR013783 -
Prci12g0729 739 CDD PHD_VIN3_plant 162 227 - -
Prci12g0729 739 MobiDBLite consensus disorder prediction 608 638 - -
Prci12g0729 739 MobiDBLite consensus disorder prediction 89 124 - -
Prci12g0729 739 MobiDBLite consensus disorder prediction 447 487 - -
Prci12g0729 739 CDD FN3 351 425 IPR003961 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0729 Prci-Chr12 6857225 6862673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0729 4 476 PHD Gene Family AT4G30200 54.653 1.09e-163 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0729 - - gmx:100794721 1150.96