Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0727 ATGGATAATGGGATTAGAAGGGGAGAAAACATCCCATCCACATTAACACAGGCAATTGAAAATTCCAGGATGTCAATCATTGTATTTTCAATTGATTATACTGGCTCTAGATGGTGCTTGCAAGAATTAGAGAAAATCATTCAGTGTCACAGAACTACTGGTCATGAGGTCTTGCCTATATTCTATGGTGTCCAACCATCAGATGTACGTAAGCAAATCGGCTCTTTTGGAAAAGCATTGGAAGGCCTTGTAAGGAGAACTTCAGCCAGCGAAGACAAGAAATTCAATTGGATGAGAGCACTTCATGAAGCTGCCAATTTATCTGGTTGGTACTCAGGTCATTATAGAACTGATGCTGAGTTGATTGATCATGTTATTGAAACTGTCACCCTGAAGTTGAATGACCACATGTATTTATTCGTTGCTCATCATCCTGTGGGAATAAACTCTCGCATGCAAGAAATCACCCACTTGTTAAGTGGTAAATCAGATGATGTTATGATAGTAGGGATTTTTGGCATGGGGGGGATTGGTAAAACAACCATTTCCAAAGCTATTTATAATGAAATTGGTGAAAGCTTTGAGGCAAAAAGTTTCCTCACAAACATTAGAAAAGCTTGGGATGAAGAAAATGGCCAGGTTCTTTTGCAAGAACAACTTCTTTCAGACATTTTACAAACAAAAAAGATCACACTACATAGTGTTGAATTGGGAAAAGCTATAATAAAGGGAAGGCTTCGTCATAAAAGGGCACTTATTGTACTAGATGATGTAAATGATGTGGTCCAACTTGATGTTTTGTGTGGAAGCAGTGAATGGTTTGGTCCAGGCAGCAGAATAATCATCACTACTAGAGATGAGCATTTACTTAAGATCATTCAAGCTGATCATGTATATAGTATGAAAGAAATGGATGACAATGAATCTCTTGAGCTTTTTAGTTGGCATGCATTTAAGCAAGTAAACCCGATAGAAGATTTCCTCGAACTCTCAACAAAGGTTATTGCTTACTCCGAAGGACTACCACTAGCTCTTGAAATCCTTGGCTCTTATTTGTTTGATAGGCCAGTACAAGCTTGGGAAAGTGTTTTAGACAGACTTAAAGGGCTTCCAAATGATCAAATACACAAGAAGCTAAAAATAAGCTATGATGGTTTGAGTAATGATGCGGAGAAAGAAATATTCTTGGATATATGTTGTTTTTTTATTGGAAGGGATAGAAATTATACCACACAAATATTAGATGGCTGTGGACTACATGCAGAAATTGGAATCACTCGACTCATAGAGTTGAGCCTTGTAAAAGTTGACAAAAATAACAAGCTTGACATGCATGGTTTGTTACGTGACATGGGAAGAGAGATCATTCGTGAAATGTCACCAGACGAGCCTGAGAAGCGTACCAGATTGTGGTTTCATAAAGACGTGGTTGAAGTGTTAACACATCATATGGGGACAAGGTGTATTAGGGGACTGGCTCTGAATTTGTCAAAAACCAAAACACTATCCTTTGATACAATTGCATTTAAGATGATGACGAGACTTAGATTGCTTCAACTTGGCCACGTAAAACTTGAGGGGAACTATGAATATCTATCAAAAGAGTTGCGGTGGCTTTGCTGGCATGGATTTCCTTTAAGTTGCATGCCAGATAATTTTCATCTAGAAAATTTAATTGCTATGGACTTGAAATACAGTCATCTCACCCACGTATGGGAGAAGTGCCAGTTGTTGGAGGGGTTGAAAATTCTCAATTTAAGTCATTCTTATTCCTTGAGGCAAACACCTGACTTTTCAAATTTGCCAAATCTTAAAAGGCTGATACTCAAAGATTGTCCACGTTTGTCTTCCATTCATCAATCCATTGGAGATCTAAAGTACCTTATTTTGTTGAATTTGAAGAATTGTAAAGATCTCACCAATTTGCCAAGTAGTTTATGTAATGTAAAATCATTGAAAACTCTCAATCTCTTTGGTTGTTCAAAGATTGACAAATTAGAAGGAGGTTTTGAGAAAATGGAATCTTTGACAACTCTATTGGCAAATGAAACTGCTATAACAGAAGTGCCTCGTTCTTTAGTAAGATCAAGAAGCATCAAATATATCTCATTATGTGGCTATGAAGGATTACCGGATGGTTTATTTTCACCTCTCATTTGGTCTTGGACATCCCCAACAAGTAGTCGAAGATTTCTTCATCAAGCATTTGCAAGCATGCCATTTTTATTGCATAATCTTTTTCATAACTTATCTAAACAAAGTAGTGGAAATTCGGAGACAGGACAAAGTGCATTCAAAATCTCATGCCCAAAAAGTGCAGCATTAATCGGTTTTTATGACCAAGTTCACAATGCAAGGGCTGAAAATTTCACGAGTTCCCTTACCATCCAAGTGGGAGGATTCAACAAAGTCGTTGATACACTTTTGAAGAGTATCTCAGAGGGGCGGACTAATGGAGGGCTTGACTATTCTCTTCCTGGAGACAATTATCCTCATTGGCTGGTTTTTGAAAATGAAGGACCCTCAGTTTCATTTACAGTTCCTCAAGTTTTTGGTCGTTGCTTAAATGGAATACTCCTGTACATTATTTATTCATCTCTTCAAGATTGCACGTCATCTTTAAATCCTATTGGTGTCATGATAAAGAATTTTACAAAGGCTACCATGGAGTTCTACAAGCGAGATGCTGCAATTTCTACTGGTGAAAAATGGCAGAATATAATATCTAATTTGGAGCCTGGAAATGAGGTGGATTTTATCGTAGATTTTTTACACAAATATATTGTGAAGAAGACTGCAATCTATCTCGTATATGGTGGAGAAACAAATAAGTGGAGAATAGTGTCACAAGGCTTCACTTAA 2862 0.3739 MDNGIRRGENIPSTLTQAIENSRMSIIVFSIDYTGSRWCLQELEKIIQCHRTTGHEVLPIFYGVQPSDVRKQIGSFGKALEGLVRRTSASEDKKFNWMRALHEAANLSGWYSGHYRTDAELIDHVIETVTLKLNDHMYLFVAHHPVGINSRMQEITHLLSGKSDDVMIVGIFGMGGIGKTTISKAIYNEIGESFEAKSFLTNIRKAWDEENGQVLLQEQLLSDILQTKKITLHSVELGKAIIKGRLRHKRALIVLDDVNDVVQLDVLCGSSEWFGPGSRIIITTRDEHLLKIIQADHVYSMKEMDDNESLELFSWHAFKQVNPIEDFLELSTKVIAYSEGLPLALEILGSYLFDRPVQAWESVLDRLKGLPNDQIHKKLKISYDGLSNDAEKEIFLDICCFFIGRDRNYTTQILDGCGLHAEIGITRLIELSLVKVDKNNKLDMHGLLRDMGREIIREMSPDEPEKRTRLWFHKDVVEVLTHHMGTRCIRGLALNLSKTKTLSFDTIAFKMMTRLRLLQLGHVKLEGNYEYLSKELRWLCWHGFPLSCMPDNFHLENLIAMDLKYSHLTHVWEKCQLLEGLKILNLSHSYSLRQTPDFSNLPNLKRLILKDCPRLSSIHQSIGDLKYLILLNLKNCKDLTNLPSSLCNVKSLKTLNLFGCSKIDKLEGGFEKMESLTTLLANETAITEVPRSLVRSRSIKYISLCGYEGLPDGLFSPLIWSWTSPTSSRRFLHQAFASMPFLLHNLFHNLSKQSSGNSETGQSAFKISCPKSAALIGFYDQVHNARAENFTSSLTIQVGGFNKVVDTLLKSISEGRTNGGLDYSLPGDNYPHWLVFENEGPSVSFTVPQVFGRCLNGILLYIIYSSLQDCTSSLNPIGVMIKNFTKATMEFYKRDAAISTGEKWQNIISNLEPGNEVDFIVDFLHKYIVKKTAIYLVYGGETNKWRIVSQGFT 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0727 953 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 398 IPR027417 -
Prci12g0727 953 ProSiteProfiles TIR domain profile. 1 133 IPR000157 GO:0007165
Prci12g0727 953 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 110 IPR035897 -
Prci12g0727 953 PRINTS Disease resistance protein signature 245 259 - -
Prci12g0727 953 PRINTS Disease resistance protein signature 168 183 - -
Prci12g0727 953 PRINTS Disease resistance protein signature 647 663 - -
Prci12g0727 953 PRINTS Disease resistance protein signature 338 352 - -
Prci12g0727 953 Gene3D - 1 137 IPR035897 -
Prci12g0727 953 SUPERFAMILY "Winged helix" DNA-binding domain 374 480 IPR036390 -
Prci12g0727 953 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 677 IPR044974 GO:0006952
Prci12g0727 953 Pfam NB-ARC domain 152 373 IPR002182 GO:0043531
Prci12g0727 953 Gene3D - 138 299 IPR027417 -
Prci12g0727 953 Gene3D - 303 387 IPR042197 -
Prci12g0727 953 Gene3D Ribonuclease Inhibitor 480 733 IPR032675 -
Prci12g0727 953 Pfam TIR domain 3 130 IPR000157 GO:0007165
Prci12g0727 953 SUPERFAMILY L domain-like 460 715 - -
Prci12g0727 953 SMART till_3 2 107 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0727 Prci-Chr12 6729724 6738920 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0727 6 693 WRKY Transcription Factor Family AT4G12020 32.958 3.24e-89 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0727 - - pcin:129288182 1907.49