Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0709 ATGGTACTCATTGCAACAAGACATAAGCATATACTTCATGACCTTAATGTCAAATATGTCTATGAAATGAAAAGAATTGACAACAGTGAATCTCTTGAGCTTTTCAGCTGGAATGCTTTTAAGCATTCTAGTCCAAGAGATGGTTTTGTTAATCTTGCAAAAAGTATAGTTACATATTGTGAAGGATTGCCACTGGTTCTTGAAGTGCTTGGCTCTCTTTTGTCCTGTAAGACAAAGCCAGAGTGGAAAAGTGTATTGTTGAAATTGAAAGGCATTCCCACAGGTCAAATACAAGAGAAGCTCAAAATAAGCTGTGAGTATTTGGATGCTTCAGTGAAAGATTTATTCTTTAACATCGCTTGCTTTTATGTGGGTGAGGAAAAACAGGATGTCATGCAAAAATTAGACAGCTTCAAAATTCCTATAGAAACTGGAATAAGTGTGCTCATTGAGCGAAGCCTTGTAAAAATTGACATAAACAACAAATTTGATATGCATGATTTGCTGCAAGAGATTGGAAAAGAAATCAATCCTAAGAAGCCAAAATCCAAATATGCCTATGATGTGTTCTTGAGTTTTAGGGGTGAAGATACACGCAAATCTTTTACAACTCATCTTCATGTTGCATTAAAAAATGCAGGCATTGAAGCTTTCATGGATAATGGGATTAGAAGGGGAGAAAACATCCCATCCACATTAACACAGGCAATTGAAAATTCCAGGATGTCAATCATTGTATTTTCAATTGATTATACTGGCTCTAGATGGTGCTTGCAAGAATTAGAGAAAATCATTCAGTGTCACAGAACTACTGGTCATGAGGTCTTGCCTATATTCTATGGTGTCCAACCATCAGATGTACGTAAGCAAATCGGCTCTTTTGGAAAAGCATTGGAAGGCCTTGTAAGGAGAACTTCAGCCAGCGAAGACAAGAAATTCAATTGGATGAGAGCACTTCATGAAGCTGCCAATTTATCTGGTTGGTACTCAGGTCATTATAGAACTGATGCTGAGTTGATTGATCATGTTATTGAAACTGTCACCCTGAAGTTGAATGACCACATGTATTTATTCGTTGCTCATCATCCTGTGGGAATAAACTCTCGCATGCAAGAAATCACCCACTTGTTAAGTGGTAAATCAGATGATGTTATGATAGTAGGGATTTTTGGCATGGGGGGGATTGGTAAAACAACCATTTCCAAAGCTATTTATAATGAAATTGGTGAAAGCTTTGAGGCAAAAAGTTTCCTCACAAACATTAGAAAAGCTTGGGATGAAGAAAATGGCCAGGTTCTTTTGCAAGAACAACTTCTTTCAGACATTTTACAAACAAAAAAGATCACACTACATAGTGTTGAATTGGGAAAAGCTATAATAAAGGGAAGGCTTCGTCATAAAAGGGCACTTATTGTACTAGATGATGTAAATGATGTGGTCCAACTTGATGTTTTGTGTGGAAGCAGTGAATGGTTTGGTCCAGGCAGCAGAATAATCATCACTACTAGAGATGAGCATTTACTTAAGATCATTCAAGCTGATCATGTATATAGTATGAAAGAAATGGATGACAATGAATCTCTTGAGCTTTTTAGTTGGCATGCATTTAAGCAAGTAAACCCGATAGAAGATTTCCTCGAACTCTCAACAAAGGTTATTGCTTACTCCGAAGGACTACCACTAGCTCTTGAAATCCTTGGCTCTTATTTGTTTGATAGGCCAGTACAAGCTTGGGAAAGTGTTTTAGACAGACTTAAAGGGCTTCCAAATGATCAAATACACAAGAAGCTAAAAATAAGCTATGATGGTTTGAGTAATGATGCGGAGAAAGAAATATTCTTGGATATATGTTGTTTTTTTATTGGAAGGGATAGAAATTATACCACACAAATATTAGATGGCTGTGGACTACATGCAGAAATTGGAATCACTCGACTCATAGAGTTGAGCCTTGTAAAAGTTGACAAAAATAACAAGCTTGACATGCATGGTTTGTTACGTGACATGGGAAGAGAGATCATTCGTGAAATGTCACCAGACGAGCCTGAGAAGCGTACCAGATTGTGGTTTCATAAAGACGTGGTTGAAGTGTTAACACATCATATGGGGACAAGGTGTATTAGGGGACTGGCTCTGAATTTGTCAAAAACCAAAACACTATCCTTTGATACAATTGCATTTAAGATGATGACGAGACTTAGATTGCTTCAACTTGGCCACGTAAAACTTGAGGGGAACTATGAATATCTATCAAAAGAGTTGCGGTGGCTTTGCTGGCATGGATTTCCTTTAAGTTGCATGCCAGATAATTTTCATCTAGAAAATTTAATTGCTATGGACTTGAAATACAGTCATCTCACCCACGTATGGGAGAAGTGCCAGTTGTTGGAGGGGTTGAAAATTCTCAATTTAAGTCATTCTTATTCCTTGAGGCAAACACCTGACTTTTCAAATTTGCCAAATCTTAAAAGGCTGATACTCAAAGATTGTCCACGTTTGTCTTCCATTCATCAATCCATTGGAGATCTAAAGTACCTTATTTTGTTGAATTTGAAGAATTGTAAAGATCTCACCAATTTGCCAAGTAGTTTATGTAATGTAAAATCATTGAAAACTCTCAATCTCTTTGGTTGTTCAAAGATTGACAAATTAGAAGGAGGTTTTGAGAAAATGGAATCTTTGACAACTCTATTGGCAAATGAAACTGCTATAACAGAAGTGCCTCGTTCTTTAGTAAGATCAAGAAGCATCAAATATATCTCATTATGTGGCTATGAAGGATTACCGGATGGTTTATTTTCACCTCTCATTTGGTCTTGGACATCCCCAACAAGTAGTCGAAGATTTCTTCATCAAGCATTTGCAAGCATGCCATTTTTATTGCATAATCTTTTTCATAACTTATCTAAACAAAGTAGTGGAAATTCGGAGACAGGACAAAGTGCATTCAAAATCTCATGCCCAAAAAGTGCAGCATTAATCGGTTTTTATGACCAAGTTCACAATGCAAGGGCTGAAAATTTCACGAGTTCCCTTACCATCCAAGTGGGAGGATTCAACAAAGTCGTTGATACACTTTTGAAGAGTATCTCAGAGGGGCGGACTAATGGAGGGCTTGACTATTCTCTTCCTGGAGACAATTATCCTCATTGGCTGGTTTTTGAAAATGAAGGACCCTCAGTTTCATTTACAGTTCCTCAAGTTTTTGGTCGTTGCTTAAATGGAATACTCCTGTACATTATTTATTCATCTCTTCAAGATTGCACGTCATCTTTAAATCCTATTGGTGTCATGATAAAGAATTTTACAAAGGCTACCATGGAGTTCTACAAGCGAGATGCTGCAATTTCTACTGGTGAAAAATGGCAGAATATAATATCTAATTTGGAGCCTGGAAATGAGGTGGATTTTATCGTAGATTTTTTACACAAATATATTGTGAAGAAGACTGCAATCTATCTCGTATATGGTGGAGAAACAAATAAGTGGAGAATAGTGTCACAAGGCTTCACTTAA 3516 0.3703 MVLIATRHKHILHDLNVKYVYEMKRIDNSESLELFSWNAFKHSSPRDGFVNLAKSIVTYCEGLPLVLEVLGSLLSCKTKPEWKSVLLKLKGIPTGQIQEKLKISCEYLDASVKDLFFNIACFYVGEEKQDVMQKLDSFKIPIETGISVLIERSLVKIDINNKFDMHDLLQEIGKEINPKKPKSKYAYDVFLSFRGEDTRKSFTTHLHVALKNAGIEAFMDNGIRRGENIPSTLTQAIENSRMSIIVFSIDYTGSRWCLQELEKIIQCHRTTGHEVLPIFYGVQPSDVRKQIGSFGKALEGLVRRTSASEDKKFNWMRALHEAANLSGWYSGHYRTDAELIDHVIETVTLKLNDHMYLFVAHHPVGINSRMQEITHLLSGKSDDVMIVGIFGMGGIGKTTISKAIYNEIGESFEAKSFLTNIRKAWDEENGQVLLQEQLLSDILQTKKITLHSVELGKAIIKGRLRHKRALIVLDDVNDVVQLDVLCGSSEWFGPGSRIIITTRDEHLLKIIQADHVYSMKEMDDNESLELFSWHAFKQVNPIEDFLELSTKVIAYSEGLPLALEILGSYLFDRPVQAWESVLDRLKGLPNDQIHKKLKISYDGLSNDAEKEIFLDICCFFIGRDRNYTTQILDGCGLHAEIGITRLIELSLVKVDKNNKLDMHGLLRDMGREIIREMSPDEPEKRTRLWFHKDVVEVLTHHMGTRCIRGLALNLSKTKTLSFDTIAFKMMTRLRLLQLGHVKLEGNYEYLSKELRWLCWHGFPLSCMPDNFHLENLIAMDLKYSHLTHVWEKCQLLEGLKILNLSHSYSLRQTPDFSNLPNLKRLILKDCPRLSSIHQSIGDLKYLILLNLKNCKDLTNLPSSLCNVKSLKTLNLFGCSKIDKLEGGFEKMESLTTLLANETAITEVPRSLVRSRSIKYISLCGYEGLPDGLFSPLIWSWTSPTSSRRFLHQAFASMPFLLHNLFHNLSKQSSGNSETGQSAFKISCPKSAALIGFYDQVHNARAENFTSSLTIQVGGFNKVVDTLLKSISEGRTNGGLDYSLPGDNYPHWLVFENEGPSVSFTVPQVFGRCLNGILLYIIYSSLQDCTSSLNPIGVMIKNFTKATMEFYKRDAAISTGEKWQNIISNLEPGNEVDFIVDFLHKYIVKKTAIYLVYGGETNKWRIVSQGFT 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0709 1171 Gene3D - 521 605 IPR042197 -
Prci12g0709 1171 SUPERFAMILY Toll/Interleukin receptor TIR domain 182 328 IPR035897 -
Prci12g0709 1171 Gene3D Ribonuclease Inhibitor 698 950 IPR032675 -
Prci12g0709 1171 Gene3D - 357 517 IPR027417 -
Prci12g0709 1171 Pfam NB-ARC domain 2 112 IPR002182 GO:0043531
Prci12g0709 1171 Pfam NB-ARC domain 370 591 IPR002182 GO:0043531
Prci12g0709 1171 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 187 895 IPR044974 GO:0006952
Prci12g0709 1171 PRINTS Disease resistance protein signature 865 881 - -
Prci12g0709 1171 PRINTS Disease resistance protein signature 463 477 - -
Prci12g0709 1171 PRINTS Disease resistance protein signature 386 401 - -
Prci12g0709 1171 PRINTS Disease resistance protein signature 556 570 - -
Prci12g0709 1171 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 353 616 IPR027417 -
Prci12g0709 1171 Pfam TIR domain 186 348 IPR000157 GO:0007165
Prci12g0709 1171 SUPERFAMILY "Winged helix" DNA-binding domain 592 698 IPR036390 -
Prci12g0709 1171 Gene3D - 184 356 IPR035897 -
Prci12g0709 1171 FunFam Disease resistance protein (TIR-NBS-LRR class) 183 353 - -
Prci12g0709 1171 SMART till_3 186 325 IPR000157 GO:0007165
Prci12g0709 1171 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 117 IPR027417 -
Prci12g0709 1171 ProSiteProfiles TIR domain profile. 185 351 IPR000157 GO:0007165
Prci12g0709 1171 SUPERFAMILY L domain-like 678 933 - -
Prci12g0709 1171 SUPERFAMILY "Winged helix" DNA-binding domain 96 180 IPR036390 -
Prci12g0709 1171 Gene3D - 26 115 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0709 Prci-Chr12 6729315 6738923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0709 170 911 WRKY Transcription Factor Family AT4G12020 31.682 2.29e-89 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0709 - - pcin:129288182 2333.91