Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0698 ATGGCTTGCTTCTGCTTCGATTCTAAATCATCGAATTCGAGTCCCAAATCTGAAGCCGGACGGCCTAACGACGTGTTCTTGACCTTCCGAGCCAAGCACGTTTCACTAAAATTTCTCCAAAACTCGATCCAAGATGCCACAATCAAAACATTCACTAGCTGCCGGGAAAATATCATCCCAATCCTGTTGGGAGCCATCGAAGAGTCCAGAATTGTTATCGTTAATTTCAATGAAGAGTTCGGCAATTCCAAATACTATCTGGAAGAGCTGCAGAAAATGATGAAGCTTACCAGAAATGAGGGTAAAATGGTGCTAGCCGTTGTGCGAGGCATTAGGTCTTCGGATTTACATCAGCAGATCGGCAGGTTAGCGGAATTAGCATTGGGAACTTCTTCATTATCAGGCTGTAGAGTGTCGACACGAACCCACAGGCCGAGTCATAGCCAAATGATGAGAGAAATCAATCAAGTCTTAAAGATAGAACTACAGATATCGGATATCTCGCAACATCTAGTGGGGATGCAAGCTCGTGTGAGAGAAGTGCTTAATTTGTCCAAATACTATTCAATTGATATTGAAAAAAATGTGATGATAGTAGGTATATGGGGAGTTGGTGGAATTGGCAAAACAACTCTTGCCAGAACAATTTATGATACAATTGGTGGCAGTTTTGAGTGTAAAAGTTTCCTTGAAAATATCAAGAATGTCTGGGTGAAAGATAATGGTCAAGTTTGTTTGCAAGAACAACTTTTTTCAGATATTTCCAAAGCAAAACATGTGAAGATACTTGACACTGGAATGGGAATCATACAATTGAAGAAAGTACTACAAAATAAAAGGGCACTTGTAGTACTTGATGATGTTAGTGAAGTAGACCAACTCATAACATTGTGTGGAGGTTGTCAATGGTTTGGTTTCGGGAGTATGATACTATTTACAGCTAGAAATGAACATCTACTTGCTCAATTTAAAGCCACATATTTCTATGAAATGAAAAGCATGGATGAAAGTGAATCTCTTGAACTGTTCAGTTGGAATGCATTCAAGCAATCTAGTCCTAGAAATGGTTTCATTGATCTTACTGAAAGAGTTATTACTTATTGTGAAGGATTACCACTGGTTCTTCAAGTCCTTGGTTCTCTTCTGTTTAATAGGACAAAACTGGAGTGGGAAAGTGTGTTGAAAAAGTTGAATAGCATTCCCACAGGTAGAATACAAGAGAAACTCAAAATAGGCTATGAATATTTAGATCATTCGGTGAAAGATATATTTTTTAATATAGCTTGTTTTTATGTGGGTGGGGAAAAACAATATGTCACACAAAAATTAAGTGGCTTTCAATTTCCTGTAGAAACTGGAATAAGCATGCTCATTGAGCGAAGCTTTTTAAAAGTAGACATGAATAACAAGCTTGATATGCATGATTTGTCGCAAGAGATTGGAAAGGAAATCAATCTTAACAAGCCAAAACCAAAACATACTTATGAGGTGTTCTTGAGCTTTAGAGGTGAAGATACACGTAGGTCTTTTGCTACTCATCTTTATGCTGCATTGGAAAAGGCTGGTGTTGCAGTTTTTATGGATAGTGAAATTAAAGGAGGAGAAAATATCTCATCGTCACTTATTCAAGCAATTGAAGGCTCCAAAATGTCTATCATTATCTTATCAATCAATTATGCCGGTTCAAGTTGGTGTTTGCAAGAACTAGAGAAAATTATGGAGTGTCACAGAAATGTTGGTCAAGATGTTTTACCAATATTCTATCATGTGCAACCATCAGATGTTCGTAAGCAAACTGGTGCTTTTGGAAGAGCATTGGAAACACTCACAACGAGAATCTCAAGTAACATACACAAGAAATTGAGTTGGACAAGGGCACTCAAGGAAGCTGCCAACTTATCTGGATGGGATTCGCATCATTTTAGAACCGATGCTGAGTTGATTGATAATGTTATTGAAACTGTTACCAAGAAGCTAGACAACAACACATATTTGTTTGTTGCTCAACATCCAGTGGGAGTGAAGTCTCGCTTACTAGAAATCGTCCAATTGTTAAGTAGGAAATCAAATGAGATTATGTTTGTAGGGATTTTTGGTATGGGAGGAATTGGCAAGACAACTATTGCCAAAGCCATTTACAATGAAATTGGTCGAAGCTTTGAGGGTAAAAGTTTCCTTAGAGATATTAGGCAAGTTTGGGAGCAGAAAAATGGTCAAGTTTATTTGCAAGAACAACTTCTTTTGGATATTCTAGAGACCAGAAGGATGGCAGTTCATAGCATTGAATTGATAATGAAGGAAAGGTTTTGCCATAAGAGGTCACTTATTGTACTTGATGATGTAAATAATGTTGACCAACTCAATGCTCTATGTGGAAGTCGTGCATGGTTTGGACCAGGCAGTAGAATAATAGTCACTACTAGAGATGAGCATATACTTAAGATCCTTCAAGCAGATAATAGATACAATATGAAAGAAATGGATGACAATGAATCTCTTGAACTTTTTAGTTGGCATGCATTTAAGCAAGCAAGTCCAGAACAAGATTTTGTTGATCTCTCGAAAAGGGTCATTGCTTACTCTGAAGGACTGCCACTAGCTCTTGAAATCCTAGGATGTTGTTTGTTTGGCCGGCCAGTACAAGCTTGGGAAAGTGTCTTGGACAAATTACAAAGAATTCCAAATGATCAAATACATAAAAAGCTAAAAATAAGCTATGATGGCTTGAGTGATGATATGGAGAAAGATATATTCTTGGATATATGCTGTTTTTTTATTGGTAAGGATAGAAATTATTGTGCACAGATATTAAATGGCTGTGGACTTCATGCAGAGATTGGAATTACTCGACTAATGGAGCGAAGCCTTGTAAAAGTTGACACTAATAACAAGCTTGATATGCATGGCTTATTACGTGACATGGGAAGAGAGATCGTTCGTGAAAAGTCACCAGATAAGCCTGAGAAACGCACAAGATTGTGGATGCACAATGATGTGATTGATGTGTTAAGAAACCATGTGGGAACCATTGCTATCAAGGGGCTGGCTCTGAATTTGTCAAGAACCAATACACTTTCCTTTGATGCAACTGCATTCATGATGATGAAGAGACTTAAATTGCTTCAACTTGGCCATGTAAACTTTGAAGGGAACTATGAATGTCTATCGAAAGAGTTGCGGTGGCTTTGTTGGCATGGGTGTTCTTTAAGTTACATGCCTGAGAATTTTTATCAAGAAAATGCAGTTGTTATCGACTTAAAATATAATCATCTCATAGAAGTATGGAAGAAGTGCCAGCTGATGGAAAAGTTAAAAATTCTCAATCTAAGTCATTCATATGACTTGAAGAAGACGCCCAACTTTTCAAAGTTGCCAAATCTTGAAAAGCTGATTCTTAAAGATTGTCCACGTTTGTCTTCGATTAATGAATCCATTGGAGATCTGAAATGCTTGATTTTGGTGAATTTGAAGGATTGTAAAGATCTTAGTGATTTGCCTAGAAGTTTATATAATTTGAAATCACTGAAAACTCTCAATATTTCTGGTTGCTCAAAGATTGGAAGACTAGAAGAAGGTATCAAGCAGATGAAATCCTTGACAACTCTTCTTGCAAAAGAAACTGCTATAACACAAGTTCCCTCTTCATTGGTGAGATTAAAAGGCATAAAATATGTGTCATTATGTGGTTATGAAGGATCATCACATGATGTATTTCCTCCTCTCATTTGGTCTTGGATGTCCCCAACAAATAATCCAAGATCCCTCATTCATACATTTGCTAGCATGCCATTTTTATTAAGAAATCTATTTCGTAGTCTTTCTAACCAAAGTAGTCAAAAATTGGAAACAAGACCAAGCACATCCCTATTGTCAACTGCAAAAACTCCAGCATTAATTAGCTTTCGTGAACAAGCTGACAATGCAGAGGCTGAAAATTTCTTGAGTTCCCTTACTATTCAAGTGGGAGGATTTAACAGAATTGTTGATGCGTTACTGAAGAGAATCCCGCAGGGATGGAGAGATGAAGGACTTGGTTGTTCTCTTCCTGGAGACAATTATCCTGATTGGCTAGCTTTTGAAAATGAAGGTCCCTCAACATCATTTAAAGTGTCTCAAGTTGTTAGTCGTTGTTTAAAAAGGATGATCATCTGCATTATCTATTCATCCCGAGGTAGCATGACATCTGTATATCCTGTTAGTGTCATGATAAAGAATTTCACAAAGGCTACCATCAAGGTTTACCAGAGAGATGCTGCAACTACTGGTGATGAGGAATGGGAAAACATTATATCTAGTTTTGGGCCTGAAAATGAAGTGGAAGTTGTAGTTAATTTTGCACATAAATGCACTGTGAAGAAGACTGCTGTTTATCTAGTATATGAAGATGAAATTGACAACAAATGGTTTGAGCATCAATGA 4419 0.3734 MACFCFDSKSSNSSPKSEAGRPNDVFLTFRAKHVSLKFLQNSIQDATIKTFTSCRENIIPILLGAIEESRIVIVNFNEEFGNSKYYLEELQKMMKLTRNEGKMVLAVVRGIRSSDLHQQIGRLAELALGTSSLSGCRVSTRTHRPSHSQMMREINQVLKIELQISDISQHLVGMQARVREVLNLSKYYSIDIEKNVMIVGIWGVGGIGKTTLARTIYDTIGGSFECKSFLENIKNVWVKDNGQVCLQEQLFSDISKAKHVKILDTGMGIIQLKKVLQNKRALVVLDDVSEVDQLITLCGGCQWFGFGSMILFTARNEHLLAQFKATYFYEMKSMDESESLELFSWNAFKQSSPRNGFIDLTERVITYCEGLPLVLQVLGSLLFNRTKLEWESVLKKLNSIPTGRIQEKLKIGYEYLDHSVKDIFFNIACFYVGGEKQYVTQKLSGFQFPVETGISMLIERSFLKVDMNNKLDMHDLSQEIGKEINLNKPKPKHTYEVFLSFRGEDTRRSFATHLYAALEKAGVAVFMDSEIKGGENISSSLIQAIEGSKMSIIILSINYAGSSWCLQELEKIMECHRNVGQDVLPIFYHVQPSDVRKQTGAFGRALETLTTRISSNIHKKLSWTRALKEAANLSGWDSHHFRTDAELIDNVIETVTKKLDNNTYLFVAQHPVGVKSRLLEIVQLLSRKSNEIMFVGIFGMGGIGKTTIAKAIYNEIGRSFEGKSFLRDIRQVWEQKNGQVYLQEQLLLDILETRRMAVHSIELIMKERFCHKRSLIVLDDVNNVDQLNALCGSRAWFGPGSRIIVTTRDEHILKILQADNRYNMKEMDDNESLELFSWHAFKQASPEQDFVDLSKRVIAYSEGLPLALEILGCCLFGRPVQAWESVLDKLQRIPNDQIHKKLKISYDGLSDDMEKDIFLDICCFFIGKDRNYCAQILNGCGLHAEIGITRLMERSLVKVDTNNKLDMHGLLRDMGREIVREKSPDKPEKRTRLWMHNDVIDVLRNHVGTIAIKGLALNLSRTNTLSFDATAFMMMKRLKLLQLGHVNFEGNYECLSKELRWLCWHGCSLSYMPENFYQENAVVIDLKYNHLIEVWKKCQLMEKLKILNLSHSYDLKKTPNFSKLPNLEKLILKDCPRLSSINESIGDLKCLILVNLKDCKDLSDLPRSLYNLKSLKTLNISGCSKIGRLEEGIKQMKSLTTLLAKETAITQVPSSLVRLKGIKYVSLCGYEGSSHDVFPPLIWSWMSPTNNPRSLIHTFASMPFLLRNLFRSLSNQSSQKLETRPSTSLLSTAKTPALISFREQADNAEAENFLSSLTIQVGGFNRIVDALLKRIPQGWRDEGLGCSLPGDNYPDWLAFENEGPSTSFKVSQVVSRCLKRMIICIIYSSRGSMTSVYPVSVMIKNFTKATIKVYQRDAATTGDEEWENIISSFGPENEVEVVVNFAHKCTVKKTAVYLVYEDEIDNKWFEHQ 1472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0698 1472 Gene3D - 153 327 IPR027417 -
Prci12g0698 1472 Gene3D - 657 822 IPR027417 -
Prci12g0698 1472 SUPERFAMILY "Winged helix" DNA-binding domain 897 1003 IPR036390 -
Prci12g0698 1472 FunFam Disease resistance protein (TIR-NBS-LRR class) 491 661 - -
Prci12g0698 1472 Gene3D - 492 656 IPR035897 -
Prci12g0698 1472 Gene3D - 6 133 IPR035897 -
Prci12g0698 1472 ProSiteProfiles TIR domain profile. 21 162 IPR000157 GO:0007165
Prci12g0698 1472 SUPERFAMILY L domain-like 982 1257 - -
Prci12g0698 1472 PRINTS Disease resistance protein signature 768 782 - -
Prci12g0698 1472 PRINTS Disease resistance protein signature 1170 1186 - -
Prci12g0698 1472 PRINTS Disease resistance protein signature 694 709 - -
Prci12g0698 1472 PRINTS Disease resistance protein signature 861 875 - -
Prci12g0698 1472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 656 921 IPR027417 -
Prci12g0698 1472 Gene3D - 826 910 IPR042197 -
Prci12g0698 1472 Gene3D - 333 417 IPR042197 -
Prci12g0698 1472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 425 IPR027417 -
Prci12g0698 1472 ProSiteProfiles TIR domain profile. 493 659 IPR000157 GO:0007165
Prci12g0698 1472 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 126 IPR035897 -
Prci12g0698 1472 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 495 1207 IPR044974 GO:0006952
Prci12g0698 1472 SMART till_3 494 633 IPR000157 GO:0007165
Prci12g0698 1472 SUPERFAMILY Toll/Interleukin receptor TIR domain 491 636 IPR035897 -
Prci12g0698 1472 Gene3D Ribonuclease Inhibitor 1008 1282 IPR032675 -
Prci12g0698 1472 Pfam NB-ARC domain 194 418 IPR002182 GO:0043531
Prci12g0698 1472 Pfam NB-ARC domain 680 907 IPR002182 GO:0043531
Prci12g0698 1472 Pfam TIR domain 25 125 IPR000157 GO:0007165
Prci12g0698 1472 Pfam TIR domain 495 661 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0698 Prci-Chr12 6656631 6670762 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0698 146 484 WRKY Transcription Factor Family AT4G12020 31.378 1.66e-32 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0698 - - pcin:129289060 1672.14