Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0696 ATGACTTACAAATACGATGTATTCTTAACTTTGAGAGATCCCTACGGTCGCCTAAAACCACATCTTGAAAGCTCTCTAAGAGATGCTGGAATTTCCGTTTTCGTTGATGAAGAAGAAGAGGGATTTTCCTTACACGAGACCATACAAAGGTCAAGAGTTGTGGTGGTCTTCTTCACACCAGAGTTTCTCGAGTCTCGGATGTGTCTTAAGCGACTGATGACCACAATTATGTGGTATCACAACGCTATGAGAAAAAAAGTTTTGCCAGTGTTCTGCGGAGTGACCCATGGGGAATTGCTTAACAAGTTGAAGGATTTGGATTGGGGAAAATCAGCCGCTGGCTGTAAGTATTCAAGAGAAGCCACCAATGTTACTTCGCTCCCTCACAGTGGCTTCGGCTTCACTACAGGAGTTAGATCAGCTTATGGCAAATCGGATTCAAGTAAAGCTATCGAGGAAGTTGCTTCGCTATCTGGCTTCATACTATCAGTTGATTTGGGCAGAGGTGGTACAGAAATTAGTGACCTTATCACCTATTTATTTGTATGCCTTCGTGAGGAATTGATTCGCAATCTTCCACATCATCAAGTAGGTTTAAAACTTCGTGTGAGAGAAGTGCTTGGTTTGTTGGAGTGGGAATACATTCATTTGAAAGATACGGTCGTAATTGGAATTTTTGGGACTGGAGGTGTTGGAAAAACTGCTATTGCCAGAGCTATTTATGATAGAATTGGAGGCAATTTTGAGTGTAGAAGTTTCCTTGAAAATATCAATGATTCATGGGAGAGAGATAAAGGCCTAGTTCTTTTACGAAGGCAACTTATTTCAGATATTTCTAAAAGTAAACTTGATGAGATAAGTGATGTTGAAGTGTCAATTGATCAAATGAAGCAAGTACACAATAGAAGAGCACTATTAGTTCTTGATGATGTAACCCAAGTAGGCCAACTCTTGGCATTGTGGAGAAGTAAAGTGGGGTTTGGCAAGGGGAGTTTGATATTCATTACAGCAAGAGATAAGGATATACTTGATGGTATATTACAGTGGTTTGGTTTTGACATTACATTCAAATTATATGAAATGAAAACGTTGGACAGGAGTGAGTCTCTCGAGCTTTTCAAGTTGCATGCATTTAAGAAATTAAGTCCAACAAATGATTTTTTGGTTCTTTCCATGCAAGCAATCAGTTACTGTGAAGGACTACCACTAGCTCTTGAAATTATTGGCTCCCTTTTGCATGACAGGACAAAATCAGAGTGGAAAAAAGTATTGCATAAATTGAAAGAAATTCCAGATGGTCAAATACAAAATAAGCTCAGGATAAGCCTTGACTTTTTAACTGATTCAGAGAAAGATTTGTTCTACAATATAGCTTGCTTCTATGTGGATCAAAGTGAACACAATGTTCTACAATTATTAAAGGGCTTGAGATTTCCAGTAGAAAAGGCAATGCATGAAATCATTAACCGAAGCCTTGTAAAGATTGTGAATGGCAAGATTCATGTTCACAATTTGTTGCAAGAGATAGGAAAGGGAATCAGTCCTAATAAGCCAAAGCTCAAATATTTATATGATGTGTTCCTGAGTTTTAGAGGGGAAGACACACGTAAAGCATTTACTACTCATCTCTGTACTGCTCTTAAACAGTCAGGTATTGAAGTCTTCATGGATGAAGAAAGGATTGAAAGGGGAGAAATTATTTCACACTCACTTCTACAGGCAATTGAAACTTCTAGGATGTCAATCATTATATTCTCAAAAAATTATGCTGGCTCTAGTTGGTGCTTGCAAGAATTAGAGAAAATCATGGAGTGCCACAAAATTTATCAAGAGGTTTTCCCTATATTCTATGATGTGCGACCATCTGAAGTTCGTAAACAACAGAATGCCTTTGGAAAAGCATGGGAGAGGCTTATAACAAGACCTTCAACTAGCAAAGCTAAGAAATTGACAATCAATTTGCGTAGAGCCCTCACTGAAGCTGCCAATTTATCTGGATGGGATATGCAAAACTACAGAACTGAAACTCAATTGATTGATGATGTTATTGAAACTATTACATTGAAGTTACATGATAACAAGCACCTGTTTGTTGCTCAACACCCAGTGGGATTGAAATCTCGTGTGGAAGATATCATCCAATTGTTAACTAGTAAATCAAATGAGGTTATCATGGCTGGGATTTGGGGGATGGGAGGGATTGGTAAGACAACCATTGCTAAAGCCATTTACAATGAAATTGGTCAAAGTTTTGCAGGAAAGAGTTTTCTTGCGAATATAAGGGAAGTTTGGAAGCAAGATAATGGCCAAGTTTATTTGCAAGAACAACTTCTTTCAAGAATTTTAAAAACAAGAAAGATAACACTACCAAATGTAGAAATGGGGAAAACTCTAATCCATGAAATGCTTTGTCAAAAGAGGGTGCTTCTTGTACTTGATGATGTGAATAATGAAGACCAACTCAAAGTGTTGTGCGGAAGTCATGAATGGTTTGGGCCAGGGAGTAGAATAATTATCACTACAAGAGATGAACGTTTGCTTAAGATCCTAAGAGTCAATCATGTATATAGTATGAGAGAAATGGATGACAATGAATCTCTTGAACTTTTTAGTTGGCATGCGTTTAAGCAAGCTATCCCTGAACAAGATTTTATTGAACATTCAAGAAGGGTATCTTCTTACACGGGAGGGTTGCCACTAGCTCTTGAAGTCCTTGGCTCTTATTTGTTTGATAAGAAAATAACCTTTTGGGAAAGTGTTTTGGAGAAATTACAACGAATTCCAAATGATAGAATACATGAAAAGCTAAAAATAAGTTTTGATGGTTTGGGTGACCATACAGAGAAAGAGATATTTCTTGACATATGTTGTTTTTTTGTTGGGAAAGATAGAAGCTATGCTGCACAAATATTAAATGGTTGTGGACTTCATGCTGAAATTGGAATTAATCGTCTAATAGAGCTTAGCCTTGTAAAAATTAACAACAAAAATAAGCTTGACATGCATGACTTACTATGTGACATGGGAAAAGAAATCATTCGTGAGCAGTCACCGGAGGAGCCTGAGAAGCGTACTCAATTATTTTTGCATGATGATGTGTTGGATGTGCTGAGAAATAATATAGGAACAATAGCTATCAAGGGATTGGCTCTAAACTTGTCAAGAAACAATTCATTATCCTTGAGTACCAAAGCATTCAAGGGGATGAGGAGGCTTCGTTTACTCCAATTTGATCATGTACAACTTATTGGAGACTATTGTTTTCTATCTAAAGAATTGAGATGGCTTTGTTGGTATGGATTTCCCTTGGAAAGCATGCCGCCTAACTTAAGTCTAGAAAAGGTGGTTATTGTAGACTTAAAGTGGAGTAATCTCACCAAAGTATGGGAGACAAGCTAGATGTTAGAGTGGTTGAAAATTCTCAATCTGAGTCATTCCCATTACTTGGTACAAACACCTGACTTTTCGAAGCTACCATTTCTTGAAAAGTTATTACTTAAAGATTGTTCATGTTTGTCTATGGTTCACCCCTCCATTGGAGAACTCAAATGTATTACTTTGCTAAATTTAAAGGATTGCAAAGGTCTCAACCATCTCCCAAGAAGTATATATAACTTGAAATCTTTGAAAACTCTCAACCTTTCTGGTTGTTCAAAGATTAGAAAGTTGGAAGAAGACATCGAGCAAATGGAATCCTTGACAACTTTGGTGGCAAATCAAACTGCTATAACACAAATTCCCTACTCGCTAGTGAGATTAAAAAGTGTGAAATATGTATCTCTATGTGGCTATGAAGGATTATCACGTGATGCATTTCCTTCTCTAGTTTTGTCTTGGATGTCGCCAACTATCTATTCAAAGTCCTTGTTCCGATCATTTAGTACCATACCATCTTTAATTAAGGGTCTATCTCATCCTTTCTTTGCCAGAAGCTATGAAATAATAGAAGCAAGACCAAGCACATCTCAAGCTTCATGTAAAAAAACTCCAACATTACTTGGTTTTCATGAAGAAGTTCACAAGGAAAGGTCGGAAAATTTTTTGAATTCTCTATCTATTCAGGTTGGTGGGTTCAACAATGTTACTGATACACTTTTGAAGAGTATTTCACAGGGATTCAATGATGGAGGGCTTGACTATTCTCTTCCAAGCGACAATTATCCTGATTGGCTAGCTTTTGAAAACGAAGAATCCTCAGTATCATTTAAAGCGCCTCAAGTTGCTGGTCGTTGCTTAAAAGGGGTGGTGCTCTATATTGTTTATTCATCTCTTCAAGATAACATGACAACTGTATATCCAGTTAGTCTCATGATAAAGAATTTGACAAAGGCTACCATAGAATTCTACAAGCAAGATGCAGCAACAATTTATGCTGAGGATGAATGGAGGAAAATACTTTCTAATTTGGAGCCAGAAAATGAGGTGGAAGTTATAGTAAATTTTGCGCACAAATATACCATAAAGAAGACTGCAATCTATCTGGTATATGGTGAAGAGCTAACAAGCTACGAATCAGTGAATAATGTTAAAACATAG 4536 0.3717 MTYKYDVFLTLRDPYGRLKPHLESSLRDAGISVFVDEEEEGFSLHETIQRSRVVVVFFTPEFLESRMCLKRLMTTIMWYHNAMRKKVLPVFCGVTHGELLNKLKDLDWGKSAAGCKYSREATNVTSLPHSGFGFTTGVRSAYGKSDSSKAIEEVASLSGFILSVDLGRGGTEISDLITYLFVCLREELIRNLPHHQVGLKLRVREVLGLLEWEYIHLKDTVVIGIFGTGGVGKTAIARAIYDRIGGNFECRSFLENINDSWERDKGLVLLRRQLISDISKSKLDEISDVEVSIDQMKQVHNRRALLVLDDVTQVGQLLALWRSKVGFGKGSLIFITARDKDILDGILQWFGFDITFKLYEMKTLDRSESLELFKLHAFKKLSPTNDFLVLSMQAISYCEGLPLALEIIGSLLHDRTKSEWKKVLHKLKEIPDGQIQNKLRISLDFLTDSEKDLFYNIACFYVDQSEHNVLQLLKGLRFPVEKAMHEIINRSLVKIVNGKIHVHNLLQEIGKGISPNKPKLKYLYDVFLSFRGEDTRKAFTTHLCTALKQSGIEVFMDEERIERGEIISHSLLQAIETSRMSIIIFSKNYAGSSWCLQELEKIMECHKIYQEVFPIFYDVRPSEVRKQQNAFGKAWERLITRPSTSKAKKLTINLRRALTEAANLSGWDMQNYRTETQLIDDVIETITLKLHDNKHLFVAQHPVGLKSRVEDIIQLLTSKSNEVIMAGIWGMGGIGKTTIAKAIYNEIGQSFAGKSFLANIREVWKQDNGQVYLQEQLLSRILKTRKITLPNVEMGKTLIHEMLCQKRVLLVLDDVNNEDQLKVLCGSHEWFGPGSRIIITTRDERLLKILRVNHVYSMREMDDNESLELFSWHAFKQAIPEQDFIEHSRRVSSYTGGLPLALEVLGSYLFDKKITFWESVLEKLQRIPNDRIHEKLKISFDGLGDHTEKEIFLDICCFFVGKDRSYAAQILNGCGLHAEIGINRLIELSLVKINNKNKLDMHDLLCDMGKEIIREQSPEEPEKRTQLFLHDDVLDVLRNNIGTIAIKGLALNLSRNNSLSLSTKAFKGMRRLRLLQFDHVQLIGDYCFLSKELRWLCWYGFPLESMPPNLSLEKVVIVDLKWSNLTKVWETSXMLEWLKILNLSHSHYLVQTPDFSKLPFLEKLLLKDCSCLSMVHPSIGELKCITLLNLKDCKGLNHLPRSIYNLKSLKTLNLSGCSKIRKLEEDIEQMESLTTLVANQTAITQIPYSLVRLKSVKYVSLCGYEGLSRDAFPSLVLSWMSPTIYSKSLFRSFSTIPSLIKGLSHPFFARSYEIIEARPSTSQASCKKTPTLLGFHEEVHKERSENFLNSLSIQVGGFNNVTDTLLKSISQGFNDGGLDYSLPSDNYPDWLAFENEESSVSFKAPQVAGRCLKGVVLYIVYSSLQDNMTTVYPVSLMIKNLTKATIEFYKQDAATIYAEDEWRKILSNLEPENEVEVIVNFAHKYTIKKTAIYLVYGEELTSYESVNNVKT 1511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0696 1511 ProSiteProfiles TIR domain profile. 3 126 IPR000157 GO:0007165
Prci12g0696 1511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 695 955 IPR027417 -
Prci12g0696 1511 SUPERFAMILY L domain-like 1050 1298 - -
Prci12g0696 1511 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 110 IPR035897 -
Prci12g0696 1511 Gene3D - 860 944 IPR042197 -
Prci12g0696 1511 Gene3D - 363 447 IPR042197 -
Prci12g0696 1511 SMART AAA_5 722 850 IPR003593 GO:0016887
Prci12g0696 1511 SMART AAA_5 219 360 IPR003593 GO:0016887
Prci12g0696 1511 PRINTS Disease resistance protein signature 1204 1220 - -
Prci12g0696 1511 PRINTS Disease resistance protein signature 802 816 - -
Prci12g0696 1511 PRINTS Disease resistance protein signature 895 909 - -
Prci12g0696 1511 PRINTS Disease resistance protein signature 725 740 - -
Prci12g0696 1511 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 524 1267 IPR044974 GO:0006952
Prci12g0696 1511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 456 IPR027417 -
Prci12g0696 1511 Gene3D - 692 855 IPR027417 -
Prci12g0696 1511 Gene3D - 185 348 IPR027417 -
Prci12g0696 1511 Gene3D - 1 178 IPR035897 -
Prci12g0696 1511 SUPERFAMILY Toll/Interleukin receptor TIR domain 519 667 IPR035897 -
Prci12g0696 1511 SUPERFAMILY "Winged helix" DNA-binding domain 931 1037 IPR036390 -
Prci12g0696 1511 ProSiteProfiles TIR domain profile. 522 690 IPR000157 GO:0007165
Prci12g0696 1511 Pfam NB-ARC domain 707 928 IPR002182 GO:0043531
Prci12g0696 1511 Pfam NB-ARC domain 219 433 IPR002182 GO:0043531
Prci12g0696 1511 Gene3D Ribonuclease Inhibitor 1031 1352 IPR032675 -
Prci12g0696 1511 Gene3D - 519 691 IPR035897 -
Prci12g0696 1511 FunFam Disease resistance protein (TIR-NBS-LRR class) 521 692 - -
Prci12g0696 1511 Pfam TIR domain 524 689 IPR000157 GO:0007165
Prci12g0696 1511 Pfam TIR domain 4 96 IPR000157 GO:0007165
Prci12g0696 1511 Coils Coil 1220 1240 - -
Prci12g0696 1511 SMART till_3 4 144 IPR000157 GO:0007165
Prci12g0696 1511 SMART till_3 523 664 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0696 Prci-Chr12 6606588 6629120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0696 5 506 WRKY Transcription Factor Family AT4G12020 24.178 1.69e-23 107