Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0689 ATGTCTTGCTTTGCTTCTTCATCCTCCACTGTCGCATCGGATTTGGTTTACGATGTCTTCTTAACTGTGAGTGATCCCGATCATCCTGCAAAAGCTGAATTAAGAAACTATTTCAGGGATCTTCAAATCAAAACTTTGATTGATGATCAGAAGGGGGTGTTTTCGATAACTGAGATAGCAAGGTTCAGAATGGTTGTGGTTGTTTTCACACCAGGTTTCGTGGAGTCCGATGTATTCCTCAAGGGACTGATGAATATAAGGAGGAGCCAAAAGATCATGAATACAAAAGTGTTGCCTGTATTCTGTGGAGTGAGCGAGGAGCAGGTACGTGAGCAGTTGGAGGGTATGGATTTGAGAAGATCAGAATCGTGGCATTTGGATTTCGATTTGGAATCGAGAAAAGCCAATACTGAAGCCGCGTTGCTTTTAGATTCGAGAAAAGCCATCGTTGAAGCTGCTTCCTCACATGGCTACACTCTGTCTTCTGATTTTGGGGATAAAATCAGTAACGGTATTGCAGATCAATCATGTCTACACATGTTCCACAATGTTATGTTTGAGGATCGTCCATATCATCAAGTAGGGTTATCGCTTCGTATGAGAAAATTGCTTGATTTTTTGGGGTGGCAATACATTATGATGAAAGATTTGTTCATGGTCGAAATTTGGGGCCCTGCAGGTATTGGTAAAACTACAATTGCCAAAGAATTTTATGATAGAGTTGGTGGCAATTTTGAAGGGAAGATTTTCTTGCAAAATCAAACCGATAAGCATCAATTTATAAAAGATGTTAGGCAACAACTTTGTTCAGATACTTCTGGAGTTGAAATAGAGGCAAATGATGTCTTATTGACATGCATGTCACCCCGTAAAAGAGTCCTAATAATATTTGATGATGTAGATGATACTGATGTTGATGATTATATTTGCCATGTATTGCGTAAAAGTAGAAAGTTGTTTGGTAAAGGGAGTTTGATATTCCTTATAGCAAGACAGATGTCTCCCTCTATCGGCTTTGTTGACTCATCGTATGAAATGAAAGTGTTAGACAGTCATGAGTCTCTTAAGCTGTTCAGTTTGTACGCATTTAAGAAATTTCCTCCAGCGAAGGGTTTTGAGAATCTTTCAAAGAAAGTCGTTTCTAAATGTTTTGGCCTACCATTGGTTCTTGAAATAATTGGCTCTCTTTTGCATAAAAGGACAATACCGGAGTGGAAAATTGTATTGAATAAATTATTGGACAGTGCTACATCATATCCTGGTCTAATTACAACGATGTGTAGACTTACTTATGACTTTTTAACTGACCCAGAGAAAGATTTATTCTATAACATAGCTTATATTTATGAGGACCAAAGTAAACATGATGTTACACAATTGTTAAAAGGATCGAGATTTCCTTTGGAAATAGGAATGAATGTACTCATTGAGCGAAACCTTGTAAAGGTCGTGAATGACAAGTTTTATGTTCATGATTTATTGCGGGAGGAATGGGGAGCCTATAGCTATGGTAAAAGACAGAAGCTCAAATATAGCTATGATGTATTTTTGAGTTTTAGAGGTGAAGATACACGTAAATCTTTTACTACTCATCTTTGCACTGCTCTAAAGCAAGCAGGTATTGAGGTCTACATGGATGAAGAACGAATTGAAGGGGGAGATAATATTTCTTCTTCGTTACTGGAAGCCATTGAAAGTTCTAGAATTTCAATAATTATATTCTCAAAAAATTATGCTGGTTCTAGTTGGTGCTTGCAAGAATTACAAAAAATCATGGAGTGTTACAAAACATCTTATCAAGAGGTATTGCCTATCTTTTACGATGTTCGGCCATTTGAAGTTCGTAAACAACAAAATGCTTTTGGAAAAACATGGGAAAAACTTGTCAACAGAACATCAAGCAGCAAAGTGAATGAATTGACAACCAAGAGAGCCCTTGCAGAGGCTGCCAACTTTTCTGGTTGGGACATGCAAACCTACAGAACTGAAACCGAGTTGATTGACCACGTTGTTGAAACTATTACAATGAAGTTAGGCGACAGCAAATGCTTGTTTGTTGCTCACCATCCTGTTGGATTAAAGCCTCGTATGCACGATATCATCCAATTGCTAAGAAGTAAATCAAATGAAGTTGTCATAGTAGGGATTTGGGGAATGGGGGGAATTGGCAAGACAACAATTGCTAAAGCCATCTACAATGAAGTTGGTCAAAGGTTTGAGGGAAAGTGTTTCCTTGCAAATGTTAGGGAATTATGGAAGCAAGATAATGGTCAAGCTTATTTGCAAGAACAACTTCTTTCAAGCATCTTAAAAGCAAGAAGGAAGACGCTACCAAATATAGAAATGGGAAAAACTTTGCTCAAGGAAATGCTTTGCAAGAAAAGAGCTTTTGTTGTACTTGATGATGTGAACAATGAAGATCAACTTAAAGCATTATGTGGAAGCCGAGAATGGTTTGGCCAAGGTAGTAGAATAATTATCACTACTAGAGATGAACATTTACTTAAGATCCTTAAAGTGATTCATGTATACAATGTGAAAGAAATGGACGACAATGAATCACTTGAGCTTTTTAGTTGGCATGCATTTAAGCAAGAGATTCCAGAAAAGGATTTTGCTACGCTTTCAAGAAGCATAGTCTCTTACTCTGGAGGGTTGCCCCTTGCTCTTGAAATTCTTGGCTCCTATTTATTTGATAGAGAAGCATTTATTTGGAAAAGCGTTTTGGAGAAATTACAAAAAATTCCCAATGATCAAATACATGAAAAGCTAAAAATAAGTTATGATGGTTTGAGTGACAATATGGAGAAAGATATATTCCTTGACATAAGTTGTTTCTTTGTTGGTATGGATAAAAGCTATGCAACACAAATATTAAACGGTTGTGGACTTCATGCAGAAATTGGAATTACTCGTCTAATCGAGCTAAGCCTTGTAAAAGTTGGCAACAAAAATAAGCTTGATATGCATGACTTACTACGTGACATGGGAAGGGAAATCATTCGTGTGCAATCACCAGAGGATCCTGAGAAGCGTACTAGATTATGGTTTTATGATGATGTTGTTGATGTGTTGAGAAATAACAATGGAACGATGGCCATCAAGGGATTGGCTTTAAACATGTCAAGGAACAATTCATTATCCTTCAGTACGAAAGCATTTAAGAAGATGAAGAGACTTCGTTTGCTACAACTCGATCATGTACAACTTGCAGGAGACTATGGTTATCTATCAACAGAACTGAGATGGCTTCGATGGCATGGACTTCCCTTAAAAAACTTGCCAATGGACTTATGTCTAGAAAAGACAGTTGTCATAGACTTAAAGTGGAGTAATCTTACTGAAGTATGGGAGAAAAGCCAGTTGCTGGAGTGGCTGAAAATTCTCAATTTGAGTCATTCTTATTACTTGAAAGAAACACCCAACTTTTCAAAGCTACCATATCTTGAAGAGTTAATACTCAAAGATTGTCCACGTTTGTCTGCAGTTCATCATTCCATTGGTGATCTTAAATATATTATTCTGTTAAATTTAAAGGACTGCAAGAGCATCAACCATCTCCCTGTAGGCACATATAGCTTGAAATCTTTGAAGACCCTTAATCTTTCTGGCTGTTCAAAGATTGAAAAGCTTGAAGAAGACATGGAGCAAATGGAATCTTTGACAACATTGGTGGCAAATCGAACTGCTATAGCACGAGTGCCCTTCTCATTAGTAAAATTGAAAAGCATTAAATATGTGTCTTTGTGTGGCTATGAAGGATTATCTCGTGATGTATTTCCATCTCTTGTTTTGTCTTGGATGTCACCAACCTGTTACTCAAAGTCCTTGTTCCGAGCATCTCAGATCATGCCATCTTTGATCAGGTGTTTATCACATCCTTTATTCACTAAAAGCATTGAGAAATTAGGAGCAAGACAAAGTACATCTGGAGCTTATTGTCAAAAAACTCCAAAATTAGTTGAATTTCCTGAGCAAGTTCACACAGATAGGTCAACAGCATGTATGAGTTCTTTGACAATGCACGTAGGTGGGTCCAACAAAGTTGTGGATACACTTCTAAAGAGTATTTCAAAGGGATGGAGTGATGGAGGGCTTGAATATTCTCTTCCGAGAGATAATTATCCTAATTGGCTAGTTTTAGAAAATGATGGGTTTTCAGTATCATTTAAAGCTCCCCAAGTTGCTGGTCATTTCTTAAAAGGAATGGTCCTCTACATTACCTATTCATGTCTTCAAGATAGCATTGGATCTGTGTATCCTATTGGTGTTGTTTTAAAGAATTTCACAAAAGCTACCTTGAATTTCTACAAGCGAGATGCTACGTCTTTTTCTACTGATGAAGAATGGCAGAACATAATATCTAATTTGGAGCCTGGAAATGAGGTGGAAGTTGAAGTTAAGTTTGCAAATAAATATGTTGTGAAGAAGACTGCAATCTATCTTGTATATGATGGAGAAGTTAACAAGCTGAGCATCACTGAATAA 4488 0.3723 MSCFASSSSTVASDLVYDVFLTVSDPDHPAKAELRNYFRDLQIKTLIDDQKGVFSITEIARFRMVVVVFTPGFVESDVFLKGLMNIRRSQKIMNTKVLPVFCGVSEEQVREQLEGMDLRRSESWHLDFDLESRKANTEAALLLDSRKAIVEAASSHGYTLSSDFGDKISNGIADQSCLHMFHNVMFEDRPYHQVGLSLRMRKLLDFLGWQYIMMKDLFMVEIWGPAGIGKTTIAKEFYDRVGGNFEGKIFLQNQTDKHQFIKDVRQQLCSDTSGVEIEANDVLLTCMSPRKRVLIIFDDVDDTDVDDYICHVLRKSRKLFGKGSLIFLIARQMSPSIGFVDSSYEMKVLDSHESLKLFSLYAFKKFPPAKGFENLSKKVVSKCFGLPLVLEIIGSLLHKRTIPEWKIVLNKLLDSATSYPGLITTMCRLTYDFLTDPEKDLFYNIAYIYEDQSKHDVTQLLKGSRFPLEIGMNVLIERNLVKVVNDKFYVHDLLREEWGAYSYGKRQKLKYSYDVFLSFRGEDTRKSFTTHLCTALKQAGIEVYMDEERIEGGDNISSSLLEAIESSRISIIIFSKNYAGSSWCLQELQKIMECYKTSYQEVLPIFYDVRPFEVRKQQNAFGKTWEKLVNRTSSSKVNELTTKRALAEAANFSGWDMQTYRTETELIDHVVETITMKLGDSKCLFVAHHPVGLKPRMHDIIQLLRSKSNEVVIVGIWGMGGIGKTTIAKAIYNEVGQRFEGKCFLANVRELWKQDNGQAYLQEQLLSSILKARRKTLPNIEMGKTLLKEMLCKKRAFVVLDDVNNEDQLKALCGSREWFGQGSRIIITTRDEHLLKILKVIHVYNVKEMDDNESLELFSWHAFKQEIPEKDFATLSRSIVSYSGGLPLALEILGSYLFDREAFIWKSVLEKLQKIPNDQIHEKLKISYDGLSDNMEKDIFLDISCFFVGMDKSYATQILNGCGLHAEIGITRLIELSLVKVGNKNKLDMHDLLRDMGREIIRVQSPEDPEKRTRLWFYDDVVDVLRNNNGTMAIKGLALNMSRNNSLSFSTKAFKKMKRLRLLQLDHVQLAGDYGYLSTELRWLRWHGLPLKNLPMDLCLEKTVVIDLKWSNLTEVWEKSQLLEWLKILNLSHSYYLKETPNFSKLPYLEELILKDCPRLSAVHHSIGDLKYIILLNLKDCKSINHLPVGTYSLKSLKTLNLSGCSKIEKLEEDMEQMESLTTLVANRTAIARVPFSLVKLKSIKYVSLCGYEGLSRDVFPSLVLSWMSPTCYSKSLFRASQIMPSLIRCLSHPLFTKSIEKLGARQSTSGAYCQKTPKLVEFPEQVHTDRSTACMSSLTMHVGGSNKVVDTLLKSISKGWSDGGLEYSLPRDNYPNWLVLENDGFSVSFKAPQVAGHFLKGMVLYITYSCLQDSIGSVYPIGVVLKNFTKATLNFYKRDATSFSTDEEWQNIISNLEPGNEVEVEVKFANKYVVKKTAIYLVYDGEVNKLSITE 1495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0689 1495 SUPERFAMILY Toll/Interleukin receptor TIR domain 503 628 IPR035897 -
Prci12g0689 1495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 444 IPR027417 -
Prci12g0689 1495 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 513 1255 IPR044974 GO:0006952
Prci12g0689 1495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 686 943 IPR027417 -
Prci12g0689 1495 SMART till_3 512 652 IPR000157 GO:0007165
Prci12g0689 1495 Pfam TIR domain 513 678 IPR000157 GO:0007165
Prci12g0689 1495 Gene3D - 348 434 IPR042197 -
Prci12g0689 1495 Gene3D - 848 932 IPR042197 -
Prci12g0689 1495 SMART AAA_5 216 352 IPR003593 GO:0016887
Prci12g0689 1495 SMART AAA_5 710 847 IPR003593 GO:0016887
Prci12g0689 1495 ProSiteProfiles TIR domain profile. 511 678 IPR000157 GO:0007165
Prci12g0689 1495 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 123 IPR035897 -
Prci12g0689 1495 Gene3D - 683 843 IPR027417 -
Prci12g0689 1495 Gene3D - 197 334 IPR027417 -
Prci12g0689 1495 Gene3D - 510 682 IPR035897 -
Prci12g0689 1495 SUPERFAMILY L domain-like 1038 1266 - -
Prci12g0689 1495 Gene3D - 12 176 IPR035897 -
Prci12g0689 1495 FunFam Disease resistance protein (TIR-NBS-LRR class) 509 680 - -
Prci12g0689 1495 SUPERFAMILY "Winged helix" DNA-binding domain 919 1025 IPR036390 -
Prci12g0689 1495 Coils Coil 1208 1228 - -
Prci12g0689 1495 Gene3D Ribonuclease Inhibitor 1029 1328 IPR032675 -
Prci12g0689 1495 PRINTS Disease resistance protein signature 790 804 - -
Prci12g0689 1495 PRINTS Disease resistance protein signature 1192 1208 - -
Prci12g0689 1495 PRINTS Disease resistance protein signature 713 728 - -
Prci12g0689 1495 PRINTS Disease resistance protein signature 883 897 - -
Prci12g0689 1495 Pfam NB-ARC domain 699 924 IPR002182 GO:0043531
Prci12g0689 1495 Pfam NB-ARC domain 216 415 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0689 Prci-Chr12 6572605 6582863 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0689 56 483 WRKY Transcription Factor Family AT4G12020 25.336 2.01e-22 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0689 - - pcin:129288830 1764.2