Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0688 ATGTCACCCCGTAAAAGAGTCCTAATAATATTTGATGATGTAGATGATACTGATGTTGATGATTATATTTGCCATGTATTGCGTAAAAGTAGAAAGTTGTTTGGTAAAGGGAGTTTGATATTCCTTATAGCAAGACAGATGTCTCCCTCTATCGGCTTTGTTGACTCATCGTATGAAATGAAAGTGTTAGACAGTCATGAGTCTCTTAAGCTGTTCAGTTTGTACGCATTTAAGAAATTTCCTCCAGCGAAGGGTTTTGAGAATCTTTCAAAGAAAGTCGTTTCTAAATGTTTTGGCCTACCATTGGTTCTTGAAATAATTGGCTCTCTTTTGCATAAAAGGACAATACCGGAGTGGAAAATTGTATTGAATAAATTATTGGACAGTGCTACATCATATCCTGGTCTAATTACAACGATGTGTAGACTTACTTATGACTTTTTAACTGACCCAGAGAAAGATTTATTCTATAACATAGCTTATATTTATGAGGACCAAAGTAAACATGATGTTACACAATTGTTAAAAGGATCGAGATTTCCTTTGGAAATAGGAATGAATGTACTCATTGAGCGAAACCTTGTAAAGGTCGTGAATGACAAGTTTTATGTTCATGATTTATTGCGGGAGGAATGGGGAGCCTATAGCTATGGTAAAAGACAGAAGCTCAAATATAGCTATGATGTATTTTTGAGTTTTAGAGGTGAAGATACACGTAAATCTTTTACTACTCATCTTTGCACTGCTCTAAAGCAAGCAGGTATTGAGGTCTACATGGATGAAGAACGAATTGAAGGGGGAGATAATATTTCTTCTTCGTTACTGGAAGCCATTGAAAGTTCTAGAATTTCAATAATTATATTCTCAAAAAATTATGCTGGTTCTAGTTGGTGCTTGCAAGAATTACAAAAAATCATGGAGTGTTACAAAACATCTTATCAAGAGGTATTGCCTATCTTTTACGATGTTCGGCCATTTGAAGTTCGTAAACAACAAAATGCTTTTGGAAAAACATGGGAAAAACTTGTCAACAGAACATCAAGCAGCAAAGTGAATGAATTGACAACCAAGAGAGCCCTTGCAGAGGCTGCCAACTTTTCTGGTTGGGACATGCAAACCTACAGAACTGAAACCGAGTTGATTGACCACGTTGTTGAAACTATTACAATGAAGTTAGGCGACAGCAAATGCTTGTTTGTTGCTCACCATCCTGTTGGATTAAAGCCTCGTATGCACGATATCATCCAATTGCTAAGAAGTAAATCAAATGAAGTTGTCATAGTAGGGATTTGGGGAATGGGGGGAATTGGCAAGACAACAATTGCTAAAGCCATCTACAATGAAGTTGGTCAAAGGTTTGAGGGAAAGTGTTTCCTTGCAAATGTTAGGGAATTATGGAAGCAAGATAATGGTCAAGCTTATTTGCAAGAACAACTTCTTTCAAGCATCTTAAAAGCAAGAAGGAAGACGCTACCAAATATAGAAATGGGAAAAACTTTGCTCAAGGAAATGCTTTGCAAGAAAAGAGCTTTTGTTGTACTTGATGATGTGAACAATGAAGATCAACTTAAAGCATTATGTGGAAGCCGAGAATGGTTTGGCCAAGGTAGTAGAATAATTATCACTACTAGAGATGAACATTTACTTAAGATCCTTAAAGTGATTCATGTATACAATGTGAAAGAAATGGACGACAATGAATCACTTGAGCTTTTTAGTTGGCATGCATTTAAGCAAGAGATTCCAGAAAAGGATTTTGCTACGCTTTCAAGAAGCATAGTCTCTTACTCTGGAGGGTTGCCCCTTGCTCTTGAAATTCTTGGCTCCTATTTATTTGATAGAGAAGCATTTATTTGGAAAAGCGTTTTGGAGAAATTACAAAAAATTCCCAATGATCAAATACATGAAAAGCTAAAAATAAGTTATGATGGTTTGAGTGACAATATGGAGAAAGATATATTCCTTGACATAAGTTGTTTCTTTGTTGGTATGGATAAAAGCTATGCAACACAAATATTAAACGGTTGTGGACTTCATGCAGAAATTGGAATTACTCGTCTAATCGAGCTAAGCCTTGTAAAAGTTGGCAACAAAAATAAGCTTGATATGCATGACTTACTACGTGACATGGGAAGGGAAATCATTCGTGTGCAATCACCAGAGGATCCTGAGAAGCGTACTAGATTATGGTTTTATGATGATGTTGTTGATGTGTTGAGAAATAACAATGGAACGATGGCCATCAAGGGATTGGCTTTAAACATGTCAAGGAACAATTCATTATCCTTCAGTACGAAAGCATTTAAGAAGATGAAGAGACTTCGTTTGCTACAACTCGATCATGTACAACTTGCAGGAGACTATGGTTATCTATCAACAGAACTGAGATGGCTTCGATGGCATGGACTTCCCTTAAAAAACTTGCCAATGGACTTATGTCTAGAAAAGACAGTTGTCATAGACTTAAAGTGGAGTAATCTTACTGAAGTATGGGAGAAAAGCCAGTTGCTGGAGTGGCTGAAAATTCTCAATTTGAGTCATTCTTATTACTTGAAAGAAACACCCAACTTTTCAAAGCTACCATATCTTGAAGAGTTAATACTCAAAGATTGTCCACGTTTGTCTGCAGTTCATCATTCCATTGGTGATCTTAAATATATTATTCTGTTAAATTTAAAGGACTGCAAGAGCATCAACCATCTCCCTGTAGGCACATATAGCTTGAAATCTTTGAAGACCCTTAATCTTTCTGGCTGTTCAAAGATTGAAAAGCTTGAAGAAGACATGGAGCAAATGGAATCTTTGACAACATTGGTGGCAAATCGAACTGCTATAGCACGAGTGCCCTTCTCATTAGTAAAATTGAAAAGCATTAAATATGTGTCTTTGTGTGGCTATGAAGGATTATCTCGTGATGTATTTCCATCTCTTGTTTTGTCTTGGATGTCACCAACCTGTTACTCAAAGTCCTTGTTCCGAGCATCTCAGATCATGCCATCTTTGATCAGGTGTTTATCACATCCTTTATTCACTAAAAGCATTGAGAAATTAGGAGCAAGACAAAGTACATCTGGAGCTTATTGTCAAAAAACTCCAAAATTAGTTGAATTTCCTGAGCAAGTTCACACAGATAGGTCAACAGCATGTATGAGTTCTTTGACAATGCACGTAGGTGGGTCCAACAAAGTTGTGGATACACTTCTAAAGAGTATTTCAAAGGGATGGAGTGATGGAGGGCTTGAATATTCTCTTCCGAGAGATAATTATCCTAATTGGCTAGTTTTAGAAAATGATGGGTTTTCAGTATCATTTAAAGCTCCCCAAGTTGCTGGTCATTTCTTAAAAGGAATGGTCCTCTACATTACCTATTCATGTCTTCAAGATAGCATTGGATCTGTGTATCCTATTGGTGTTGTTTTAAAGAATTTCACAAAAGCTACCTTGAATTTCTACAAGCGAGATGCTACGTCTTTTTCTACTGATGAAGAATGGCAGAACATAATATCTAATTTGGAGCCTGGAAATGAGGTGGAAGTTGAAGTTAAGTTTGCAAATAAATATGTTGTGAAGAAGACTGCAATCTATCTTGTATATGATGGAGAAGTTAACAAGCTGAGCATCACTGAATAA 3630 0.3656 MSPRKRVLIIFDDVDDTDVDDYICHVLRKSRKLFGKGSLIFLIARQMSPSIGFVDSSYEMKVLDSHESLKLFSLYAFKKFPPAKGFENLSKKVVSKCFGLPLVLEIIGSLLHKRTIPEWKIVLNKLLDSATSYPGLITTMCRLTYDFLTDPEKDLFYNIAYIYEDQSKHDVTQLLKGSRFPLEIGMNVLIERNLVKVVNDKFYVHDLLREEWGAYSYGKRQKLKYSYDVFLSFRGEDTRKSFTTHLCTALKQAGIEVYMDEERIEGGDNISSSLLEAIESSRISIIIFSKNYAGSSWCLQELQKIMECYKTSYQEVLPIFYDVRPFEVRKQQNAFGKTWEKLVNRTSSSKVNELTTKRALAEAANFSGWDMQTYRTETELIDHVVETITMKLGDSKCLFVAHHPVGLKPRMHDIIQLLRSKSNEVVIVGIWGMGGIGKTTIAKAIYNEVGQRFEGKCFLANVRELWKQDNGQAYLQEQLLSSILKARRKTLPNIEMGKTLLKEMLCKKRAFVVLDDVNNEDQLKALCGSREWFGQGSRIIITTRDEHLLKILKVIHVYNVKEMDDNESLELFSWHAFKQEIPEKDFATLSRSIVSYSGGLPLALEILGSYLFDREAFIWKSVLEKLQKIPNDQIHEKLKISYDGLSDNMEKDIFLDISCFFVGMDKSYATQILNGCGLHAEIGITRLIELSLVKVGNKNKLDMHDLLRDMGREIIRVQSPEDPEKRTRLWFYDDVVDVLRNNNGTMAIKGLALNMSRNNSLSFSTKAFKKMKRLRLLQLDHVQLAGDYGYLSTELRWLRWHGLPLKNLPMDLCLEKTVVIDLKWSNLTEVWEKSQLLEWLKILNLSHSYYLKETPNFSKLPYLEELILKDCPRLSAVHHSIGDLKYIILLNLKDCKSINHLPVGTYSLKSLKTLNLSGCSKIEKLEEDMEQMESLTTLVANRTAIARVPFSLVKLKSIKYVSLCGYEGLSRDVFPSLVLSWMSPTCYSKSLFRASQIMPSLIRCLSHPLFTKSIEKLGARQSTSGAYCQKTPKLVEFPEQVHTDRSTACMSSLTMHVGGSNKVVDTLLKSISKGWSDGGLEYSLPRDNYPNWLVLENDGFSVSFKAPQVAGHFLKGMVLYITYSCLQDSIGSVYPIGVVLKNFTKATLNFYKRDATSFSTDEEWQNIISNLEPGNEVEVEVKFANKYVVKKTAIYLVYDGEVNKLSITE 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0688 1209 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 158 IPR027417 -
Prci12g0688 1209 PRINTS Disease resistance protein signature 427 442 - -
Prci12g0688 1209 PRINTS Disease resistance protein signature 597 611 - -
Prci12g0688 1209 PRINTS Disease resistance protein signature 504 518 - -
Prci12g0688 1209 PRINTS Disease resistance protein signature 906 922 - -
Prci12g0688 1209 Coils Coil 922 942 - -
Prci12g0688 1209 Gene3D - 62 148 IPR042197 -
Prci12g0688 1209 Gene3D - 562 646 IPR042197 -
Prci12g0688 1209 Gene3D - 224 396 IPR035897 -
Prci12g0688 1209 FunFam Disease resistance protein (TIR-NBS-LRR class) 223 394 - -
Prci12g0688 1209 ProSiteProfiles TIR domain profile. 225 392 IPR000157 GO:0007165
Prci12g0688 1209 SUPERFAMILY L domain-like 752 982 - -
Prci12g0688 1209 Pfam TIR domain 227 392 IPR000157 GO:0007165
Prci12g0688 1209 SUPERFAMILY "Winged helix" DNA-binding domain 633 739 IPR036390 -
Prci12g0688 1209 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 210 IPR044974 GO:0006952
Prci12g0688 1209 Pfam NB-ARC domain 413 638 IPR002182 GO:0043531
Prci12g0688 1209 Pfam NB-ARC domain 4 129 IPR002182 GO:0043531
Prci12g0688 1209 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 400 657 IPR027417 -
Prci12g0688 1209 SMART AAA_5 424 561 IPR003593 GO:0016887
Prci12g0688 1209 Gene3D Ribonuclease Inhibitor 738 981 IPR032675 -
Prci12g0688 1209 Gene3D - 397 557 IPR027417 -
Prci12g0688 1209 SUPERFAMILY Toll/Interleukin receptor TIR domain 217 342 IPR035897 -
Prci12g0688 1209 SMART till_3 226 366 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0688 Prci-Chr12 6567221 6582326 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0688 227 975 WRKY Transcription Factor Family AT4G12020 30.925 1.45e-84 301